RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 NEFMP07197 916 aa14.56□□□□□ -0.08
KDM1A-205ENST00000494920 RIPK4P57078 832 aa14.56□□□□□ -0.08
KDM1A-205ENST00000494920 DCTN1Q14203 1278 aa14.56□□□□□ -0.08
KDM1A-205ENST00000494920 MCM10Q7L590 875 aa14.56□□□□□ -0.08
KDM1A-205ENST00000494920 TAF1LQ8IZX4 1826 aa14.56□□□□□ -0.08
KDM1A-205ENST00000494920 PLSCR1O15162 318 aa14.55□□□□□ -0.08
KDM1A-205ENST00000494920 CAMKK2Q96RR4 588 aa14.55□□□□□ -0.08
KDM1A-205ENST00000494920 TMOD3Q9NYL9 352 aa14.55□□□□□ -0.08
KDM1A-205ENST00000494920 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
KDM1A-205ENST00000494920 NFATC2IPQ8NCF5 419 aa14.54□□□□□ -0.08
KDM1A-205ENST00000494920 SYTL4Q96C24 671 aaPredicted RBP14.54□□□□□ -0.08
KDM1A-205ENST00000494920 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
KDM1A-205ENST00000494920 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
KDM1A-205ENST00000494920 TJP1Q07157 1748 aa14.54□□□□□ -0.08
KDM1A-205ENST00000494920 COL5A3P25940 1745 aaPredicted RBP14.53□□□□□ -0.08
KDM1A-205ENST00000494920 CABP4P57796 275 aa14.53□□□□□ -0.08
KDM1A-205ENST00000494920 LMOD3Q0VAK6 560 aa14.53□□□□□ -0.08
KDM1A-205ENST00000494920 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
KDM1A-205ENST00000494920 PROM2Q8N271 834 aa14.53□□□□□ -0.08
KDM1A-205ENST00000494920 ASAP1Q9ULH1 1129 aa14.53□□□□□ -0.08
KDM1A-205ENST00000494920 PALLDQ8WX93 1383 aa14.52□□□□□ -0.08
KDM1A-205ENST00000494920 ZNF521Q96K83 1311 aa14.52□□□□□ -0.08
KDM1A-205ENST00000494920 APBA3O96018 575 aa14.52□□□□□ -0.09
KDM1A-205ENST00000494920 RTF1Q92541 710 aaKnown RBP14.52□□□□□ -0.09
KDM1A-205ENST00000494920 BAG6P46379 1132 aa14.51□□□□□ -0.09
KDM1A-205ENST00000494920 EN1Q05925 392 aaPredicted RBP14.51□□□□□ -0.09
KDM1A-205ENST00000494920 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
KDM1A-205ENST00000494920 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
KDM1A-205ENST00000494920 C5P01031 1676 aa14.51□□□□□ -0.09
KDM1A-205ENST00000494920 ZNF853P0CG23 659 aa14.5□□□□□ -0.09
KDM1A-205ENST00000494920 TEFQ10587 303 aa14.5□□□□□ -0.09
KDM1A-205ENST00000494920 WWC1Q8IX03 1113 aa14.5□□□□□ -0.09
KDM1A-205ENST00000494920 NGEFQ8N5V2 710 aa14.5□□□□□ -0.09
KDM1A-205ENST00000494920 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
KDM1A-205ENST00000494920 MYH14Q7Z406 1995 aaKnown RBP14.5□□□□□ -0.09
KDM1A-205ENST00000494920 HEG1Q9ULI3 1381 aa14.49□□□□□ -0.09
KDM1A-205ENST00000494920 SENP3-EIF4A1A0A087X0R7 540 aa14.49□□□□□ -0.09
KDM1A-205ENST00000494920 SLC39A6Q13433 755 aa14.49□□□□□ -0.09
KDM1A-205ENST00000494920 EZH2Q15910 746 aaKnown RBP14.49□□□□□ -0.09
KDM1A-205ENST00000494920 LRRC4BQ9NT99 713 aa14.49□□□□□ -0.09
KDM1A-205ENST00000494920 TUBGCP6Q96RT7 1819 aa14.49□□□□□ -0.09
KDM1A-205ENST00000494920 KCNQ3O43525 872 aa14.48□□□□□ -0.09
KDM1A-205ENST00000494920 SF3B2Q13435 895 aaKnown RBP14.48□□□□□ -0.09
KDM1A-205ENST00000494920 TAF7Q15545 349 aaPredicted RBP14.48□□□□□ -0.09
KDM1A-205ENST00000494920 TXNRD1Q16881 649 aa14.48□□□□□ -0.09
KDM1A-205ENST00000494920 ZNF790Q6PG37 636 aa14.48□□□□□ -0.09
KDM1A-205ENST00000494920 BABAM1Q9NWV8 329 aa14.48□□□□□ -0.09
KDM1A-205ENST00000494920 SRCAPQ6ZRS2 3230 aa14.48□□□□□ -0.09
KDM1A-205ENST00000494920 LAMB4A4D0S4 1761 aa14.47□□□□□ -0.09
KDM1A-205ENST00000494920 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
KDM1A-205ENST00000494920 LOC102724428A0A0B4J2F2 783 aa14.47□□□□□ -0.09
KDM1A-205ENST00000494920 CHL1O00533 1208 aa14.47□□□□□ -0.09
KDM1A-205ENST00000494920 SIK1P57059 783 aa14.47□□□□□ -0.09
KDM1A-205ENST00000494920 C4BP0C0L5 1744 aa14.46□□□□□ -0.09
KDM1A-205ENST00000494920 IL16Q14005 1332 aa14.46□□□□□ -0.09
KDM1A-205ENST00000494920 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
KDM1A-205ENST00000494920 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.09
KDM1A-205ENST00000494920 ZNF496Q96IT1 587 aaPredicted RBP14.46□□□□□ -0.09
KDM1A-205ENST00000494920 UBR3Q6ZT12 1888 aa14.46□□□□□ -0.1
KDM1A-205ENST00000494920 ITPK1Q13572 414 aa14.45□□□□□ -0.1
KDM1A-205ENST00000494920 CFAP44Q96MT7 982 aa14.45□□□□□ -0.1
KDM1A-205ENST00000494920 IFT57Q9NWB7 429 aa14.45□□□□□ -0.1
KDM1A-205ENST00000494920 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
KDM1A-205ENST00000494920 WDR63Q8IWG1 891 aa14.44□□□□□ -0.1
KDM1A-205ENST00000494920 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
KDM1A-205ENST00000494920 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
KDM1A-205ENST00000494920 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
KDM1A-205ENST00000494920 KCNQ4P56696 695 aa14.43□□□□□ -0.1
KDM1A-205ENST00000494920 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
KDM1A-205ENST00000494920 LINC00116Q8NCU8 138 aa14.43□□□□□ -0.1
KDM1A-205ENST00000494920 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
KDM1A-205ENST00000494920 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
KDM1A-205ENST00000494920 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
KDM1A-205ENST00000494920 MBIPQ9NS73 344 aa14.42□□□□□ -0.1
KDM1A-205ENST00000494920 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
KDM1A-205ENST00000494920 SALL2Q9Y467 1007 aaPredicted RBP14.42□□□□□ -0.1
KDM1A-205ENST00000494920 GNAI1P63096 354 aa14.41□□□□□ -0.1
KDM1A-205ENST00000494920 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
KDM1A-205ENST00000494920 TTC5Q8N0Z6 440 aa14.41□□□□□ -0.1
KDM1A-205ENST00000494920 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
KDM1A-205ENST00000494920 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
KDM1A-205ENST00000494920 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
KDM1A-205ENST00000494920 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
KDM1A-205ENST00000494920 DNAJC10Q8IXB1 793 aa14.4□□□□□ -0.1
KDM1A-205ENST00000494920 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
KDM1A-205ENST00000494920 CNTNAP4Q9C0A0 1308 aa14.4□□□□□ -0.1
KDM1A-205ENST00000494920 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
KDM1A-205ENST00000494920 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
KDM1A-205ENST00000494920 PRAMEF22A3QJZ6 481 aa14.39□□□□□ -0.11
KDM1A-205ENST00000494920 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
KDM1A-205ENST00000494920 AMIGO3Q86WK7 504 aa14.39□□□□□ -0.11
KDM1A-205ENST00000494920 CYP19A1P11511 503 aaPredicted RBP14.38□□□□□ -0.11
KDM1A-205ENST00000494920 KRT24Q2M2I5 525 aa14.38□□□□□ -0.11
KDM1A-205ENST00000494920 TRMT2AQ8IZ69 625 aaKnown RBP14.38□□□□□ -0.11
KDM1A-205ENST00000494920 TSR2Q969E8 191 aaKnown RBP14.38□□□□□ -0.11
KDM1A-205ENST00000494920 ZBED9Q6R2W3 1325 aa14.38□□□□□ -0.11
KDM1A-205ENST00000494920 SNRPA1P09661 255 aaKnown RBP14.37□□□□□ -0.11
KDM1A-205ENST00000494920 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
KDM1A-205ENST00000494920 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
KDM1A-205ENST00000494920 COL24A1Q17RW2 1714 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms