RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
SDF4-207ENST00000494748 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
SDF4-207ENST00000494748 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
SDF4-207ENST00000494748 SSH2Q76I76 1423 aa18.67■□□□□ 0.58
SDF4-207ENST00000494748 ANAPC15P60006 121 aa18.67■□□□□ 0.58
SDF4-207ENST00000494748 MCM10Q7L590 875 aa18.67■□□□□ 0.58
SDF4-207ENST00000494748 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
SDF4-207ENST00000494748 G2E3Q7L622 706 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 IL25Q9H293 177 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 GDPD2Q9HCC8 539 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 CHMLP26374 656 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 TMEM87AQ8NBN3 555 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 NCKAP5LQ9HCH0 1330 aa18.66■□□□□ 0.58
SDF4-207ENST00000494748 FMN2Q9NZ56 1722 aa18.65■□□□□ 0.58
SDF4-207ENST00000494748 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
SDF4-207ENST00000494748 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
SDF4-207ENST00000494748 GTF2F1P35269 517 aaKnown RBP eCLIP18.65■□□□□ 0.586e-7■■■■□ 22.1
SDF4-207ENST00000494748 PIBF1Q8WXW3 757 aa18.65■□□□□ 0.58
SDF4-207ENST00000494748 CRYBG1Q9Y4K1 1723 aa18.64■□□□□ 0.58
SDF4-207ENST00000494748 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.58
SDF4-207ENST00000494748 EXOC6BQ9Y2D4 811 aa18.64■□□□□ 0.57
SDF4-207ENST00000494748 SPATA31D1Q6ZQQ2 1576 aa18.64■□□□□ 0.57
SDF4-207ENST00000494748 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
SDF4-207ENST00000494748 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.63■□□□□ 0.57
SDF4-207ENST00000494748 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 F6X3S4 739 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
SDF4-207ENST00000494748 HMMRO75330 724 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 UVSSAQ2YD98 709 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 CACNA1FO60840 1977 aa18.63■□□□□ 0.57
SDF4-207ENST00000494748 COG3Q96JB2 828 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 CCDC94Q9BW85 323 aaPredicted RBP18.62■□□□□ 0.57
SDF4-207ENST00000494748 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
SDF4-207ENST00000494748 TOPAZ1Q8N9V7 1692 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SDF4-207ENST00000494748 TSC1Q92574 1164 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 SYAP1Q96A49 352 aaPredicted RBP18.62■□□□□ 0.57
SDF4-207ENST00000494748 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
SDF4-207ENST00000494748 MX1P20591 662 aa18.61■□□□□ 0.57
SDF4-207ENST00000494748 SRCIN1Q9C0H9 1055 aa18.61■□□□□ 0.57
SDF4-207ENST00000494748 MPNDQ8N594 471 aa18.61■□□□□ 0.57
SDF4-207ENST00000494748 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
SDF4-207ENST00000494748 USP25Q9UHP3 1055 aa18.61■□□□□ 0.57
SDF4-207ENST00000494748 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
SDF4-207ENST00000494748 C17orf53Q8N3J3 647 aaPredicted RBP18.6■□□□□ 0.57
SDF4-207ENST00000494748 ARID3AQ99856 593 aa18.6■□□□□ 0.57
SDF4-207ENST00000494748 NOLC1Q14978 699 aaKnown RBP eCLIP18.6■□□□□ 0.57
SDF4-207ENST00000494748 FOXD4L6Q3SYB3 417 aaPredicted RBP18.6■□□□□ 0.57
SDF4-207ENST00000494748 FOXD4L3Q6VB84 417 aaPredicted RBP18.6■□□□□ 0.57
SDF4-207ENST00000494748 FAM184AQ8NB25 1140 aa18.6■□□□□ 0.57
SDF4-207ENST00000494748 FUCA2Q9BTY2 467 aa18.6■□□□□ 0.57
SDF4-207ENST00000494748 PTMAP06454 111 aaKnown RBP18.6■□□□□ 0.57
SDF4-207ENST00000494748 PRIMPOLQ96LW4 560 aa18.6■□□□□ 0.57
SDF4-207ENST00000494748 ARHGEF10O15013 1369 aa18.59■□□□□ 0.57
SDF4-207ENST00000494748 CCT4P50991 539 aaKnown RBP18.59■□□□□ 0.57
SDF4-207ENST00000494748 HMGN5P82970 282 aaKnown RBP18.59■□□□□ 0.57
SDF4-207ENST00000494748 ANO2Q9NQ90 1003 aa18.59■□□□□ 0.57
SDF4-207ENST00000494748 OVOS2A0A0J9YW53 1432 aa18.59■□□□□ 0.57
SDF4-207ENST00000494748 OVOS2Q6IE36 1432 aa18.59■□□□□ 0.57
SDF4-207ENST00000494748 LRRCC1Q9C099 1032 aa18.59■□□□□ 0.57
SDF4-207ENST00000494748 TTC12Q9H892 705 aaPredicted RBP18.59■□□□□ 0.57
SDF4-207ENST00000494748 WDR33Q9C0J8 1336 aaKnown RBP18.59■□□□□ 0.57
SDF4-207ENST00000494748 PHF14O94880 888 aa18.58■□□□□ 0.57
SDF4-207ENST00000494748 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.57
SDF4-207ENST00000494748 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.57
SDF4-207ENST00000494748 AP5Z1O43299 807 aa18.58■□□□□ 0.57
SDF4-207ENST00000494748 ADCY5O95622 1261 aa18.58■□□□□ 0.57
SDF4-207ENST00000494748 HSPA4P34932 840 aa18.58■□□□□ 0.57
SDF4-207ENST00000494748 FKBP5Q13451 457 aaPredicted RBP18.58■□□□□ 0.57
SDF4-207ENST00000494748 CCDC183Q5T5S1 534 aa18.58■□□□□ 0.56
SDF4-207ENST00000494748 METP08581 1390 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 GNAI2P04899 355 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
SDF4-207ENST00000494748 MCCP23508 829 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 TTC14Q96N46 770 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 PRR36Q9H6K5 1346 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
SDF4-207ENST00000494748 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
SDF4-207ENST00000494748 HCLS1P14317 486 aaPredicted RBP18.56■□□□□ 0.56
SDF4-207ENST00000494748 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
SDF4-207ENST00000494748 ATP8B2P98198 1209 aa18.55■□□□□ 0.56
SDF4-207ENST00000494748 ZBTB7CA1YPR0 619 aa18.55■□□□□ 0.56
SDF4-207ENST00000494748 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
SDF4-207ENST00000494748 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
SDF4-207ENST00000494748 DMTNQ08495 405 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 KCNF1Q9H3M0 494 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 TECPR2O15040 1411 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 FOXO3O43524 673 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 AOX1Q06278 1338 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
SDF4-207ENST00000494748 KDM4AO75164 1064 aa18.53■□□□□ 0.56
SDF4-207ENST00000494748 UTP14CQ5TAP6 766 aaKnown RBP18.53■□□□□ 0.56
SDF4-207ENST00000494748 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
SDF4-207ENST00000494748 TRIM6-TRIM34B2RNG4 842 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms