RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
LIMS2-216ENST00000494613 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
LIMS2-216ENST00000494613 AK7Q96M32 723 aa21.04■□□□□ 0.96
LIMS2-216ENST00000494613 SLC4A9Q96Q91 983 aa21.04■□□□□ 0.96
LIMS2-216ENST00000494613 U2SURPO15042 1029 aaKnown RBP21.03■□□□□ 0.96
LIMS2-216ENST00000494613 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
LIMS2-216ENST00000494613 KDM6AO15550 1401 aaPredicted RBP21.02■□□□□ 0.96
LIMS2-216ENST00000494613 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
LIMS2-216ENST00000494613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
LIMS2-216ENST00000494613 PHF14O94880 888 aa21■□□□□ 0.95
LIMS2-216ENST00000494613 PPP2R1AP30153 589 aa21■□□□□ 0.95
LIMS2-216ENST00000494613 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
LIMS2-216ENST00000494613 RNMTO43148 476 aaKnown RBP20.99■□□□□ 0.95
LIMS2-216ENST00000494613 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
LIMS2-216ENST00000494613 CFAP53Q96M91 514 aa20.99■□□□□ 0.95
LIMS2-216ENST00000494613 SSFA2P28290 1259 aa20.98■□□□□ 0.95
LIMS2-216ENST00000494613 GNPATO15228 680 aa20.97■□□□□ 0.95
LIMS2-216ENST00000494613 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
LIMS2-216ENST00000494613 KLHL34Q8N239 644 aa20.97■□□□□ 0.95
LIMS2-216ENST00000494613 SLC52A2Q9HAB3 445 aa20.97■□□□□ 0.95
LIMS2-216ENST00000494613 TAF1LQ8IZX4 1826 aa20.97■□□□□ 0.95
LIMS2-216ENST00000494613 TUBGCP6Q96RT7 1819 aa20.97■□□□□ 0.95
LIMS2-216ENST00000494613 C5P01031 1676 aa20.96■□□□□ 0.95
LIMS2-216ENST00000494613 TRAPPC3LQ5T215 181 aa20.95■□□□□ 0.94
LIMS2-216ENST00000494613 NUDCQ9Y266 331 aa20.95■□□□□ 0.94
LIMS2-216ENST00000494613 MAP3K5Q99683 1374 aa20.95■□□□□ 0.94
LIMS2-216ENST00000494613 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
LIMS2-216ENST00000494613 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
LIMS2-216ENST00000494613 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
LIMS2-216ENST00000494613 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
LIMS2-216ENST00000494613 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
LIMS2-216ENST00000494613 YY1P25490 414 aa20.92■□□□□ 0.94
LIMS2-216ENST00000494613 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
LIMS2-216ENST00000494613 IL17REQ8NFR9 667 aa20.92■□□□□ 0.94
LIMS2-216ENST00000494613 ARHGEF1Q92888 912 aaKnown RBP20.92■□□□□ 0.94
LIMS2-216ENST00000494613 U2AF1L5P0DN76 240 aaPredicted RBP20.91■□□□□ 0.94
LIMS2-216ENST00000494613 U2AF1Q01081 240 aaKnown RBP eCLIP20.91■□□□□ 0.94
LIMS2-216ENST00000494613 NLGN2Q8NFZ4 835 aa20.91■□□□□ 0.94
LIMS2-216ENST00000494613 RSPH6AQ9H0K4 717 aa20.91■□□□□ 0.94
LIMS2-216ENST00000494613 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
LIMS2-216ENST00000494613 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
LIMS2-216ENST00000494613 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
LIMS2-216ENST00000494613 GPR162Q16538 588 aa20.9■□□□□ 0.94
LIMS2-216ENST00000494613 GAS2L2Q8NHY3 880 aa20.9■□□□□ 0.94
LIMS2-216ENST00000494613 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
LIMS2-216ENST00000494613 FCHSD2O94868 740 aa20.89■□□□□ 0.93
LIMS2-216ENST00000494613 CRKLP46109 303 aaKnown RBP20.89■□□□□ 0.93
LIMS2-216ENST00000494613 CD2APQ9Y5K6 639 aa20.88■□□□□ 0.93
LIMS2-216ENST00000494613 ADRA2BP18089 450 aa20.87■□□□□ 0.93
LIMS2-216ENST00000494613 RFC4P35249 363 aa20.87■□□□□ 0.93
LIMS2-216ENST00000494613 DDX10Q13206 875 aaKnown RBP20.87■□□□□ 0.93
LIMS2-216ENST00000494613 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
LIMS2-216ENST00000494613 DNAJC10Q8IXB1 793 aa20.87■□□□□ 0.93
LIMS2-216ENST00000494613 UBR3Q6ZT12 1888 aa20.87■□□□□ 0.93
LIMS2-216ENST00000494613 NLGN1Q8N2Q7 840 aa20.86■□□□□ 0.93
LIMS2-216ENST00000494613 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
LIMS2-216ENST00000494613 TEFQ10587 303 aa20.85■□□□□ 0.93
LIMS2-216ENST00000494613 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
LIMS2-216ENST00000494613 MMP10P09238 476 aa20.83■□□□□ 0.93
LIMS2-216ENST00000494613 CYP19A1P11511 503 aaPredicted RBP20.83■□□□□ 0.93
LIMS2-216ENST00000494613 GYS1P13807 737 aa20.83■□□□□ 0.93
LIMS2-216ENST00000494613 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
LIMS2-216ENST00000494613 VSIG10Q8N0Z9 540 aa20.82■□□□□ 0.92
LIMS2-216ENST00000494613 CCDC87Q9NVE4 849 aa20.82■□□□□ 0.92
LIMS2-216ENST00000494613 ZNF790Q6PG37 636 aa20.81■□□□□ 0.92
LIMS2-216ENST00000494613 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
LIMS2-216ENST00000494613 MYH14Q7Z406 1995 aaKnown RBP20.8■□□□□ 0.92
LIMS2-216ENST00000494613 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
LIMS2-216ENST00000494613 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
LIMS2-216ENST00000494613 SRP68Q9UHB9 627 aaKnown RBP20.79■□□□□ 0.92
LIMS2-216ENST00000494613 MRC1P22897 1456 aa20.78■□□□□ 0.92
LIMS2-216ENST00000494613 RALBP1Q15311 655 aa20.78■□□□□ 0.92
LIMS2-216ENST00000494613 RTF1Q92541 710 aaKnown RBP20.78■□□□□ 0.92
LIMS2-216ENST00000494613 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
LIMS2-216ENST00000494613 BTBD11A6QL63 1104 aa20.77■□□□□ 0.92
LIMS2-216ENST00000494613 KCNQ3O43525 872 aa20.77■□□□□ 0.92
LIMS2-216ENST00000494613 GRIN3BO60391 1043 aa20.77■□□□□ 0.92
LIMS2-216ENST00000494613 MCM10Q7L590 875 aa20.77■□□□□ 0.92
LIMS2-216ENST00000494613 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.91
LIMS2-216ENST00000494613 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
LIMS2-216ENST00000494613 STARD3NLO95772 234 aa20.76■□□□□ 0.91
LIMS2-216ENST00000494613 DCTN1Q14203 1278 aa20.76■□□□□ 0.91
LIMS2-216ENST00000494613 FKBP8Q14318 412 aa20.76■□□□□ 0.91
LIMS2-216ENST00000494613 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
LIMS2-216ENST00000494613 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
LIMS2-216ENST00000494613 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-216ENST00000494613 ZPR1O75312 459 aa20.75■□□□□ 0.91
LIMS2-216ENST00000494613 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
LIMS2-216ENST00000494613 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
LIMS2-216ENST00000494613 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
LIMS2-216ENST00000494613 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-216ENST00000494613 USP42Q9H9J4 1324 aaKnown RBP20.75■□□□□ 0.91
LIMS2-216ENST00000494613 UTRNP46939 3433 aa20.74■□□□□ 0.91
LIMS2-216ENST00000494613 TM4SF1P30408 202 aa20.74■□□□□ 0.91
LIMS2-216ENST00000494613 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
LIMS2-216ENST00000494613 KCPQ6ZWJ8 1503 aa20.73■□□□□ 0.91
LIMS2-216ENST00000494613 NEFMP07197 916 aa20.73■□□□□ 0.91
LIMS2-216ENST00000494613 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
LIMS2-216ENST00000494613 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
LIMS2-216ENST00000494613 TGFB2P61812 414 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms