RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
CNNM3-205ENST00000494595 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
CNNM3-205ENST00000494595 DLG5Q8TDM6 1919 aa18.46■□□□□ 0.55
CNNM3-205ENST00000494595 IL16Q14005 1332 aa18.46■□□□□ 0.55
CNNM3-205ENST00000494595 CHL1O00533 1208 aa18.45■□□□□ 0.54
CNNM3-205ENST00000494595 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
CNNM3-205ENST00000494595 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
CNNM3-205ENST00000494595 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
CNNM3-205ENST00000494595 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
CNNM3-205ENST00000494595 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
CNNM3-205ENST00000494595 CCDC125Q86Z20 511 aa18.43■□□□□ 0.54
CNNM3-205ENST00000494595 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
CNNM3-205ENST00000494595 IFT57Q9NWB7 429 aa18.43■□□□□ 0.54
CNNM3-205ENST00000494595 SBF2Q86WG5 1849 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 PLSCR1O15162 318 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 KCNQ3O43525 872 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
CNNM3-205ENST00000494595 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
CNNM3-205ENST00000494595 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
CNNM3-205ENST00000494595 GNAI1P63096 354 aa18.41■□□□□ 0.54
CNNM3-205ENST00000494595 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
CNNM3-205ENST00000494595 APBA3O96018 575 aa18.4■□□□□ 0.54
CNNM3-205ENST00000494595 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
CNNM3-205ENST00000494595 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
CNNM3-205ENST00000494595 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
CNNM3-205ENST00000494595 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
CNNM3-205ENST00000494595 ITGB4P16144 1822 aa18.39■□□□□ 0.53
CNNM3-205ENST00000494595 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
CNNM3-205ENST00000494595 ZNF496Q96IT1 587 aaPredicted RBP18.38■□□□□ 0.53
CNNM3-205ENST00000494595 SLC4A9Q96Q91 983 aa18.38■□□□□ 0.53
CNNM3-205ENST00000494595 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
CNNM3-205ENST00000494595 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
CNNM3-205ENST00000494595 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
CNNM3-205ENST00000494595 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
CNNM3-205ENST00000494595 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
CNNM3-205ENST00000494595 SLFN5Q08AF3 891 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
CNNM3-205ENST00000494595 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 PROM2Q8N271 834 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 BTAF1O14981 1849 aa18.37■□□□□ 0.53
CNNM3-205ENST00000494595 LOC102724428A0A0B4J2F2 783 aa18.36■□□□□ 0.53
CNNM3-205ENST00000494595 E9PSI1 815 aa18.36■□□□□ 0.53
CNNM3-205ENST00000494595 SIK1P57059 783 aa18.36■□□□□ 0.53
CNNM3-205ENST00000494595 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
CNNM3-205ENST00000494595 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
CNNM3-205ENST00000494595 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
CNNM3-205ENST00000494595 BAG6P46379 1132 aa18.35■□□□□ 0.53
CNNM3-205ENST00000494595 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
CNNM3-205ENST00000494595 VSIG10Q8N0Z9 540 aa18.35■□□□□ 0.53
CNNM3-205ENST00000494595 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
CNNM3-205ENST00000494595 FMNL2Q96PY5 1086 aa18.35■□□□□ 0.53
CNNM3-205ENST00000494595 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
CNNM3-205ENST00000494595 TXNRD1Q16881 649 aa18.34■□□□□ 0.53
CNNM3-205ENST00000494595 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
CNNM3-205ENST00000494595 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.53
CNNM3-205ENST00000494595 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.52
CNNM3-205ENST00000494595 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
CNNM3-205ENST00000494595 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.52
CNNM3-205ENST00000494595 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
CNNM3-205ENST00000494595 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
CNNM3-205ENST00000494595 ITPK1Q13572 414 aa18.32■□□□□ 0.52
CNNM3-205ENST00000494595 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
CNNM3-205ENST00000494595 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
CNNM3-205ENST00000494595 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
CNNM3-205ENST00000494595 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CNNM3-205ENST00000494595 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
CNNM3-205ENST00000494595 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
CNNM3-205ENST00000494595 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
CNNM3-205ENST00000494595 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
CNNM3-205ENST00000494595 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
CNNM3-205ENST00000494595 KCNQ4P56696 695 aa18.3■□□□□ 0.52
CNNM3-205ENST00000494595 DNAJC10Q8IXB1 793 aa18.3■□□□□ 0.52
CNNM3-205ENST00000494595 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
CNNM3-205ENST00000494595 HOXB7P09629 217 aa18.29■□□□□ 0.52
CNNM3-205ENST00000494595 USP16Q9Y5T5 823 aa18.29■□□□□ 0.52
CNNM3-205ENST00000494595 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
CNNM3-205ENST00000494595 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
CNNM3-205ENST00000494595 EP400Q96L91 3159 aa18.29■□□□□ 0.52
CNNM3-205ENST00000494595 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
CNNM3-205ENST00000494595 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
CNNM3-205ENST00000494595 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
CNNM3-205ENST00000494595 TEX13AQ9BXU3 409 aaPredicted RBP18.28■□□□□ 0.52
CNNM3-205ENST00000494595 LY75O60449 1722 aa18.28■□□□□ 0.52
CNNM3-205ENST00000494595 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
CNNM3-205ENST00000494595 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.52
CNNM3-205ENST00000494595 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.52
CNNM3-205ENST00000494595 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
CNNM3-205ENST00000494595 CYP19A1P11511 503 aaPredicted RBP18.27■□□□□ 0.52
CNNM3-205ENST00000494595 SOCS7O14512 581 aa18.25■□□□□ 0.51
CNNM3-205ENST00000494595 VAMP4O75379 141 aa18.25■□□□□ 0.51
CNNM3-205ENST00000494595 CNTNAP4Q9C0A0 1308 aa18.24■□□□□ 0.51
CNNM3-205ENST00000494595 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
CNNM3-205ENST00000494595 HMGB2P26583 209 aaKnown RBP18.24■□□□□ 0.51
CNNM3-205ENST00000494595 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
CNNM3-205ENST00000494595 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
CNNM3-205ENST00000494595 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms