RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 MCM10Q7L590 875 aa14.05□□□□□ -0.16
ZIC4-216ENST00000494569 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
ZIC4-216ENST00000494569 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
ZIC4-216ENST00000494569 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
ZIC4-216ENST00000494569 GCP02774 474 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 KRT28Q7Z3Y7 464 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 MAP3K5Q99683 1374 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 C5P01031 1676 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 HDAC1Q13547 482 aaPredicted RBP14.04□□□□□ -0.16
ZIC4-216ENST00000494569 PLEKHG2Q9H7P9 1386 aa14.04□□□□□ -0.16
ZIC4-216ENST00000494569 IPO8O15397 1037 aaKnown RBP14.03□□□□□ -0.16
ZIC4-216ENST00000494569 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 DDX19BQ9UMR2 479 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 TNS3Q68CZ2 1445 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
ZIC4-216ENST00000494569 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.16
ZIC4-216ENST00000494569 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.17
ZIC4-216ENST00000494569 ATP10DQ9P241 1426 aa14.02□□□□□ -0.17
ZIC4-216ENST00000494569 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
ZIC4-216ENST00000494569 ZBTB7BO15156 539 aaPredicted RBP14.01□□□□□ -0.17
ZIC4-216ENST00000494569 IPO9Q96P70 1041 aaKnown RBP14.01□□□□□ -0.17
ZIC4-216ENST00000494569 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
ZIC4-216ENST00000494569 SLIT2O94813 1529 aa14.01□□□□□ -0.17
ZIC4-216ENST00000494569 GNAT3A8MTJ3 354 aa14□□□□□ -0.17
ZIC4-216ENST00000494569 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
ZIC4-216ENST00000494569 SOS1Q07889 1333 aaPredicted RBP14□□□□□ -0.17
ZIC4-216ENST00000494569 NBR1Q14596 966 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 GJD4Q96KN9 370 aaPredicted RBP13.99□□□□□ -0.17
ZIC4-216ENST00000494569 AXIN2Q9Y2T1 843 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 CPDO75976 1380 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 MRC1P22897 1456 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
ZIC4-216ENST00000494569 PXDNLA1KZ92 1463 aa13.98□□□□□ -0.17
ZIC4-216ENST00000494569 LAMB4A4D0S4 1761 aa13.98□□□□□ -0.17
ZIC4-216ENST00000494569 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
ZIC4-216ENST00000494569 PDE4CQ08493 712 aa13.98□□□□□ -0.17
ZIC4-216ENST00000494569 INTS3Q68E01 1043 aaKnown RBP13.98□□□□□ -0.17
ZIC4-216ENST00000494569 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
ZIC4-216ENST00000494569 WNK3Q9BYP7 1800 aa13.98□□□□□ -0.17
ZIC4-216ENST00000494569 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
ZIC4-216ENST00000494569 ANP32AP39687 249 aaKnown RBP13.97□□□□□ -0.17
ZIC4-216ENST00000494569 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
ZIC4-216ENST00000494569 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
ZIC4-216ENST00000494569 PTPRCP08575 1304 aa13.96□□□□□ -0.17
ZIC4-216ENST00000494569 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.17
ZIC4-216ENST00000494569 ITPRIPQ8IWB1 547 aa13.96□□□□□ -0.17
ZIC4-216ENST00000494569 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
ZIC4-216ENST00000494569 API5Q9BZZ5 524 aaKnown RBP13.96□□□□□ -0.18
ZIC4-216ENST00000494569 ERBB3P21860 1342 aa13.96□□□□□ -0.18
ZIC4-216ENST00000494569 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
ZIC4-216ENST00000494569 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
ZIC4-216ENST00000494569 UNC5CLQ8IV45 518 aa13.95□□□□□ -0.18
ZIC4-216ENST00000494569 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
ZIC4-216ENST00000494569 HEG1Q9ULI3 1381 aa13.95□□□□□ -0.18
ZIC4-216ENST00000494569 ANKRD24Q8TF21 1146 aa13.95□□□□□ -0.18
ZIC4-216ENST00000494569 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
ZIC4-216ENST00000494569 SIRT2Q8IXJ6 389 aa13.94□□□□□ -0.18
ZIC4-216ENST00000494569 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
ZIC4-216ENST00000494569 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
ZIC4-216ENST00000494569 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
ZIC4-216ENST00000494569 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
ZIC4-216ENST00000494569 PLCH1Q4KWH8 1693 aa13.93□□□□□ -0.18
ZIC4-216ENST00000494569 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
ZIC4-216ENST00000494569 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
ZIC4-216ENST00000494569 MIS18AQ9NYP9 233 aa13.93□□□□□ -0.18
ZIC4-216ENST00000494569 NUP188Q5SRE5 1749 aa13.92□□□□□ -0.18
ZIC4-216ENST00000494569 ONECUT3O60422 494 aaPredicted RBP13.92□□□□□ -0.18
ZIC4-216ENST00000494569 AMOTQ4VCS5 1084 aa13.92□□□□□ -0.18
ZIC4-216ENST00000494569 MEGF6O75095 1541 aa13.91□□□□□ -0.18
ZIC4-216ENST00000494569 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
ZIC4-216ENST00000494569 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
ZIC4-216ENST00000494569 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
ZIC4-216ENST00000494569 NUCB1Q02818 461 aa13.9□□□□□ -0.18
ZIC4-216ENST00000494569 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
ZIC4-216ENST00000494569 SEC24BO95487 1268 aa13.9□□□□□ -0.18
ZIC4-216ENST00000494569 VPS72Q15906 364 aa13.9□□□□□ -0.18
ZIC4-216ENST00000494569 HOXB7P09629 217 aa13.89□□□□□ -0.19
ZIC4-216ENST00000494569 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
ZIC4-216ENST00000494569 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
ZIC4-216ENST00000494569 NRAPQ86VF7 1730 aa13.89□□□□□ -0.19
ZIC4-216ENST00000494569 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
ZIC4-216ENST00000494569 G2E3Q7L622 706 aa13.89□□□□□ -0.19
ZIC4-216ENST00000494569 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
ZIC4-216ENST00000494569 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
ZIC4-216ENST00000494569 RGS3P49796 1198 aa13.88□□□□□ -0.19
ZIC4-216ENST00000494569 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
ZIC4-216ENST00000494569 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
ZIC4-216ENST00000494569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
ZIC4-216ENST00000494569 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
ZIC4-216ENST00000494569 COL5A2P05997 1499 aaPredicted RBP13.86□□□□□ -0.19
ZIC4-216ENST00000494569 GCC1Q96CN9 775 aa13.86□□□□□ -0.19
ZIC4-216ENST00000494569 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
ZIC4-216ENST00000494569 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
ZIC4-216ENST00000494569 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
ZIC4-216ENST00000494569 TJP1Q07157 1748 aa13.85□□□□□ -0.19
ZIC4-216ENST00000494569 DISP2A7MBM2 1401 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms