RNA–Protein interactions for RNA: ENST00000494439.5

CNOT10-218, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-218ENST00000494439 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
CNOT10-218ENST00000494439 RGPD2P0DJD1 1756 aa17.69■□□□□ 0.42
CNOT10-218ENST00000494439 POTECB2RU33 542 aa17.69■□□□□ 0.42
CNOT10-218ENST00000494439 GNPATO15228 680 aa17.69■□□□□ 0.42
CNOT10-218ENST00000494439 HSPA8P11142 646 aaKnown RBP17.68■□□□□ 0.42
CNOT10-218ENST00000494439 TMF1P82094 1093 aa17.68■□□□□ 0.42
CNOT10-218ENST00000494439 ITGB4P16144 1822 aa17.67■□□□□ 0.42
CNOT10-218ENST00000494439 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
CNOT10-218ENST00000494439 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
CNOT10-218ENST00000494439 VEGFBP49765 207 aa17.66■□□□□ 0.42
CNOT10-218ENST00000494439 RASSF7Q02833 373 aa17.66■□□□□ 0.42
CNOT10-218ENST00000494439 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
CNOT10-218ENST00000494439 LOC102724428A0A0B4J2F2 783 aa17.65■□□□□ 0.42
CNOT10-218ENST00000494439 SIK1P57059 783 aa17.65■□□□□ 0.42
CNOT10-218ENST00000494439 ITPK1Q13572 414 aa17.64■□□□□ 0.41
CNOT10-218ENST00000494439 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
CNOT10-218ENST00000494439 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
CNOT10-218ENST00000494439 PIGBQ92521 554 aa17.63■□□□□ 0.41
CNOT10-218ENST00000494439 LMNB1P20700 586 aa17.62■□□□□ 0.41
CNOT10-218ENST00000494439 HOXC9P31274 260 aa17.62■□□□□ 0.41
CNOT10-218ENST00000494439 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
CNOT10-218ENST00000494439 PCDH11XQ9BZA7 1347 aa17.62■□□□□ 0.41
CNOT10-218ENST00000494439 PCDH11YQ9BZA8 1340 aa17.62■□□□□ 0.41
CNOT10-218ENST00000494439 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
CNOT10-218ENST00000494439 GYS1P13807 737 aa17.61■□□□□ 0.41
CNOT10-218ENST00000494439 CHRNA5P30532 468 aa17.6■□□□□ 0.41
CNOT10-218ENST00000494439 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
CNOT10-218ENST00000494439 RAPGEF4Q8WZA2 1011 aa17.6■□□□□ 0.41
CNOT10-218ENST00000494439 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
CNOT10-218ENST00000494439 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
CNOT10-218ENST00000494439 PASKQ96RG2 1323 aa17.59■□□□□ 0.41
CNOT10-218ENST00000494439 CYP27B1O15528 508 aa17.59■□□□□ 0.41
CNOT10-218ENST00000494439 RTCBQ9Y3I0 505 aaKnown RBP17.59■□□□□ 0.41
CNOT10-218ENST00000494439 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 POTEJP0CG39 1038 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
CNOT10-218ENST00000494439 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 ARHGEF1Q92888 912 aaKnown RBP17.58■□□□□ 0.4
CNOT10-218ENST00000494439 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 PDE4DIPQ5VU43 2346 aa17.58■□□□□ 0.4
CNOT10-218ENST00000494439 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
CNOT10-218ENST00000494439 ADRA2BP18089 450 aa17.56■□□□□ 0.4
CNOT10-218ENST00000494439 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
CNOT10-218ENST00000494439 DPY19L2Q6NUT2 758 aa17.56■□□□□ 0.4
CNOT10-218ENST00000494439 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
CNOT10-218ENST00000494439 AMPHP49418 695 aa17.55■□□□□ 0.4
CNOT10-218ENST00000494439 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
CNOT10-218ENST00000494439 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
CNOT10-218ENST00000494439 TNRC18O15417 2968 aaPredicted RBP17.54■□□□□ 0.4
CNOT10-218ENST00000494439 RFC4P35249 363 aa17.53■□□□□ 0.4
CNOT10-218ENST00000494439 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
CNOT10-218ENST00000494439 FBLN1P23142 703 aa17.52■□□□□ 0.4
CNOT10-218ENST00000494439 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
CNOT10-218ENST00000494439 RASSF10A6NK89 507 aa17.51■□□□□ 0.39
CNOT10-218ENST00000494439 DDR1Q08345 913 aa17.51■□□□□ 0.39
CNOT10-218ENST00000494439 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
CNOT10-218ENST00000494439 HDGFL2Q7Z4V5 671 aaPredicted RBP17.51■□□□□ 0.39
CNOT10-218ENST00000494439 RAB3GAP2Q9H2M9 1393 aa17.51■□□□□ 0.39
CNOT10-218ENST00000494439 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CNOT10-218ENST00000494439 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
CNOT10-218ENST00000494439 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
CNOT10-218ENST00000494439 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
CNOT10-218ENST00000494439 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
CNOT10-218ENST00000494439 ATG3Q9NT62 314 aa17.49■□□□□ 0.39
CNOT10-218ENST00000494439 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
CNOT10-218ENST00000494439 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
CNOT10-218ENST00000494439 KDRP35968 1356 aa17.49■□□□□ 0.39
CNOT10-218ENST00000494439 LDHDQ86WU2 507 aa17.48■□□□□ 0.39
CNOT10-218ENST00000494439 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
CNOT10-218ENST00000494439 FKBP8Q14318 412 aa17.47■□□□□ 0.39
CNOT10-218ENST00000494439 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
CNOT10-218ENST00000494439 MCOLN1Q9GZU1 580 aa17.47■□□□□ 0.39
CNOT10-218ENST00000494439 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
CNOT10-218ENST00000494439 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
CNOT10-218ENST00000494439 COL5A3P25940 1745 aaPredicted RBP17.47■□□□□ 0.39
CNOT10-218ENST00000494439 PRPF38BQ5VTL8 546 aaKnown RBP17.46■□□□□ 0.39
CNOT10-218ENST00000494439 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
CNOT10-218ENST00000494439 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
CNOT10-218ENST00000494439 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
CNOT10-218ENST00000494439 POLRMTO00411 1230 aaKnown RBP17.45■□□□□ 0.38
CNOT10-218ENST00000494439 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
CNOT10-218ENST00000494439 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
CNOT10-218ENST00000494439 THSD7BQ9C0I4 1608 aa17.45■□□□□ 0.38
CNOT10-218ENST00000494439 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
CNOT10-218ENST00000494439 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
CNOT10-218ENST00000494439 TTLL6Q8N841 843 aa17.44■□□□□ 0.38
CNOT10-218ENST00000494439 COG3Q96JB2 828 aa17.44■□□□□ 0.38
CNOT10-218ENST00000494439 SRP68Q9UHB9 627 aaKnown RBP17.44■□□□□ 0.38
CNOT10-218ENST00000494439 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
CNOT10-218ENST00000494439 TM4SF1P30408 202 aa17.43■□□□□ 0.38
CNOT10-218ENST00000494439 USP42Q9H9J4 1324 aaKnown RBP17.43■□□□□ 0.38
CNOT10-218ENST00000494439 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
CNOT10-218ENST00000494439 BEGAINQ9BUH8 593 aa17.42■□□□□ 0.38
CNOT10-218ENST00000494439 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
CNOT10-218ENST00000494439 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
CNOT10-218ENST00000494439 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
CNOT10-218ENST00000494439 SCN4AP35499 1836 aa17.4■□□□□ 0.38
CNOT10-218ENST00000494439 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
CNOT10-218ENST00000494439 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms