RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SIX5Q8N196 739 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 TPCN2Q8NHX9 752 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 C1orf216Q8TAB5 229 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 VTI1AQ96AJ9 217 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 AGBL1Q96MI9 1066 aa4.48□□□□□ -1.69
LMNB1-207ENST00000494185 NIFKQ9BYG3 293 aaKnown RBP4.48□□□□□ -1.69
LMNB1-207ENST00000494185 ZNF395Q9H8N7 513 aaPredicted RBP4.48□□□□□ -1.69
LMNB1-207ENST00000494185 SOS2Q07890 1332 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-207ENST00000494185 A0A1B0GTH6 734 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L15C9J2P7 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L10C9JJH3 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L13C9JLJ4 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L12C9JPN9 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L11C9JVI0 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L21D6R901 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L18D6R9N7 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L22D6RA61 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L17D6RBQ6 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L19D6RCP7 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L20D6RJB6 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 USP17L24Q0WX57 530 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 KANK4Q5T7N3 995 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-207ENST00000494185 GAS2L2Q8NHY3 880 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 RNF217Q8TC41 542 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 FAM200AQ8TCP9 573 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 ZNF594Q96JF6 807 aaPredicted RBP4.47□□□□□ -1.69
LMNB1-207ENST00000494185 RAB6BQ9NRW1 208 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 MTMR7Q9Y216 660 aa4.47□□□□□ -1.69
LMNB1-207ENST00000494185 ADD1P35611 737 aaKnown RBP4.46□□□□□ -1.7
LMNB1-207ENST00000494185 SMTNP53814 917 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 SRPK2P78362 688 aaKnown RBP4.46□□□□□ -1.7
LMNB1-207ENST00000494185 CLDN10P78369 228 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 LBRQ14739 615 aaKnown RBP4.46□□□□□ -1.7
LMNB1-207ENST00000494185 SWI5Q1ZZU3 235 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 CDCA8Q53HL2 280 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 EFHC2Q5JST6 749 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 ANKMY2Q8IV38 441 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 XAGE2Q96GT9 111 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 NEUROD4Q9HD90 331 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 PHF24Q9UPV7 400 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 GPC6Q9Y625 555 aaPredicted RBP4.46□□□□□ -1.7
LMNB1-207ENST00000494185 GJA3Q9Y6H8 435 aa4.46□□□□□ -1.7
LMNB1-207ENST00000494185 A6NJY4 79 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 SPATA31C2B4DYI2 1134 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 ATG7O95352 703 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 CTSOP43234 321 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 CENPCQ03188 943 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 PTK7Q13308 1070 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 ELOAQ14241 798 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 CRTC2Q53ET0 693 aaPredicted RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 FIGNL1Q6PIW4 674 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 PPARGC1BQ86YN6 1023 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 IRF7Q92985 503 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 TRERF1Q96PN7 1200 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 HINFPQ9BQA5 517 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 ETNK1Q9HBU6 452 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 TIMMDC1Q9NPL8 285 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 NXF1Q9UBU9 619 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 NOVA2Q9UNW9 492 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 NSFL1CQ9UNZ2 370 aaKnown RBP4.45□□□□□ -1.7
LMNB1-207ENST00000494185 DYRK1BQ9Y463 629 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 PCDHGA11Q9Y5H2 935 aa4.45□□□□□ -1.7
LMNB1-207ENST00000494185 CDK2AP1O14519 115 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 IL2RAP01589 272 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 PRICKLE2Q7Z3G6 844 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 SLC4A9Q96Q91 983 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 ZNF358Q9NW07 568 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 ZDHHC3Q9NYG2 299 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 CABP1Q9NZU7 370 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 SERTAD1Q9UHV2 236 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 DNMT3LQ9UJW3 386 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 ZNF232Q9UNY5 417 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 KIAA1024Q9UPX6 916 aa4.44□□□□□ -1.7
LMNB1-207ENST00000494185 FIGNL2A6NMB9 653 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 ZBTB7BO15156 539 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-207ENST00000494185 SCNN1DP51172 638 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 PTSQ03393 145 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 DPYDQ12882 1025 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 MTFR1Q15390 333 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 FOXD4L5Q5VV16 416 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-207ENST00000494185 NBPF10Q6P3W6 841 aaKnown RBP4.43□□□□□ -1.7
LMNB1-207ENST00000494185 BICDL1Q6ZP65 573 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 GRIP2Q9C0E4 1043 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 SCHIP1Q9P0W5 487 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-207ENST00000494185 ANKIB1Q9P2G1 1089 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 USTQ9Y2C2 406 aa4.43□□□□□ -1.7
LMNB1-207ENST00000494185 SERTM1A2A2V5 107 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 FOXO3O43524 673 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 PPP1R12BO60237 982 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-207ENST00000494185 F11P03951 625 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 PLA2G4AP47712 749 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 NEUROD1Q13562 356 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 RIPOR1Q6ZS17 1223 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 STAG2Q8N3U4 1231 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 KDF1Q8NAX2 398 aaPredicted RBP4.42□□□□□ -1.7
LMNB1-207ENST00000494185 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.42□□□□□ -1.7
LMNB1-207ENST00000494185 AIDAQ96BJ3 306 aa4.42□□□□□ -1.7
LMNB1-207ENST00000494185 DACH1Q9UI36 760 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms