RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MYT1Q01538 1121 aa14.78□□□□□ -0.04
MCF2L-231ENST00000494043 EXOSC9Q06265 439 aaKnown RBP14.78□□□□□ -0.04
MCF2L-231ENST00000494043 MARCH10Q8NA82 808 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-231ENST00000494043 MIS18AQ9NYP9 233 aa14.78□□□□□ -0.04
MCF2L-231ENST00000494043 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
MCF2L-231ENST00000494043 CT47B1P0C2W7 299 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-231ENST00000494043 CABP4P57796 275 aa14.76□□□□□ -0.05
MCF2L-231ENST00000494043 RBM6P78332 1123 aaKnown RBP14.76□□□□□ -0.05
MCF2L-231ENST00000494043 NFATC2IPQ8NCF5 419 aa14.76□□□□□ -0.05
MCF2L-231ENST00000494043 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
MCF2L-231ENST00000494043 SEPT12Q8IYM1 358 aa14.75□□□□□ -0.05
MCF2L-231ENST00000494043 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
MCF2L-231ENST00000494043 C8orf58Q8NAV2 365 aa14.74□□□□□ -0.05
MCF2L-231ENST00000494043 RGS17Q9UGC6 210 aaPredicted RBP14.74□□□□□ -0.05
MCF2L-231ENST00000494043 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
MCF2L-231ENST00000494043 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
MCF2L-231ENST00000494043 KCNQ3O43525 872 aa14.72□□□□□ -0.05
MCF2L-231ENST00000494043 EIF4A1P60842 406 aaKnown RBP14.72□□□□□ -0.05
MCF2L-231ENST00000494043 KRT24Q2M2I5 525 aa14.72□□□□□ -0.05
MCF2L-231ENST00000494043 TWISTNBQ3B726 338 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-231ENST00000494043 TSPYL6Q8N831 410 aa14.72□□□□□ -0.05
MCF2L-231ENST00000494043 BCL9O00512 1426 aa14.72□□□□□ -0.05
MCF2L-231ENST00000494043 RXRBP28702 533 aa14.71□□□□□ -0.05
MCF2L-231ENST00000494043 SLC39A6Q13433 755 aa14.71□□□□□ -0.05
MCF2L-231ENST00000494043 ZNF790Q6PG37 636 aa14.71□□□□□ -0.05
MCF2L-231ENST00000494043 ZNF428Q96B54 188 aa14.71□□□□□ -0.05
MCF2L-231ENST00000494043 ITGB4P16144 1822 aa14.71□□□□□ -0.06
MCF2L-231ENST00000494043 SOS1Q07889 1333 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-231ENST00000494043 ELL2O00472 640 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-231ENST00000494043 VAMP4O75379 141 aa14.7□□□□□ -0.06
MCF2L-231ENST00000494043 RARSP54136 660 aaKnown RBP14.7□□□□□ -0.06
MCF2L-231ENST00000494043 TTC5Q8N0Z6 440 aa14.7□□□□□ -0.06
MCF2L-231ENST00000494043 PIGBQ92521 554 aa14.7□□□□□ -0.06
MCF2L-231ENST00000494043 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
MCF2L-231ENST00000494043 HEG1Q9ULI3 1381 aa14.7□□□□□ -0.06
MCF2L-231ENST00000494043 PRIM1P49642 420 aaKnown RBP14.69□□□□□ -0.06
MCF2L-231ENST00000494043 POTEAQ6S8J7 498 aa14.69□□□□□ -0.06
MCF2L-231ENST00000494043 KCPQ6ZWJ8 1503 aa14.69□□□□□ -0.06
MCF2L-231ENST00000494043 UBR2Q8IWV8 1755 aa14.69□□□□□ -0.06
MCF2L-231ENST00000494043 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 RGS12O14924 1447 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 HOXB7P09629 217 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 ADRA2BP18089 450 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 SYTL4Q96C24 671 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-231ENST00000494043 ACSBG1Q96GR2 724 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 BRWD3Q6RI45 1802 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
MCF2L-231ENST00000494043 BCAR3O75815 825 aa14.67□□□□□ -0.06
MCF2L-231ENST00000494043 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
MCF2L-231ENST00000494043 SSH1Q8WYL5 1049 aa14.67□□□□□ -0.06
MCF2L-231ENST00000494043 ZNF496Q96IT1 587 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-231ENST00000494043 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
MCF2L-231ENST00000494043 RRP1P56182 461 aaKnown RBP14.66□□□□□ -0.06
MCF2L-231ENST00000494043 FAM182BQ5T319 152 aa14.66□□□□□ -0.06
MCF2L-231ENST00000494043 FMNL2Q96PY5 1086 aa14.66□□□□□ -0.06
MCF2L-231ENST00000494043 ATG3Q9NT62 314 aa14.66□□□□□ -0.06
MCF2L-231ENST00000494043 SMC4Q9NTJ3 1288 aa14.66□□□□□ -0.06
MCF2L-231ENST00000494043 ASAP1Q9ULH1 1129 aa14.66□□□□□ -0.06
MCF2L-231ENST00000494043 KCNQ2O43526 872 aa14.65□□□□□ -0.06
MCF2L-231ENST00000494043 BCL2L13Q9BXK5 485 aa14.65□□□□□ -0.06
MCF2L-231ENST00000494043 C5P01031 1676 aa14.65□□□□□ -0.06
MCF2L-231ENST00000494043 BRPF1P55201 1214 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-231ENST00000494043 SNRPA1P09661 255 aaKnown RBP14.63□□□□□ -0.07
MCF2L-231ENST00000494043 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
MCF2L-231ENST00000494043 CCDC30Q5VVM6 783 aa14.63□□□□□ -0.07
MCF2L-231ENST00000494043 FAM196AQ6ZSG2 479 aa14.63□□□□□ -0.07
MCF2L-231ENST00000494043 MRPL50Q8N5N7 158 aaKnown RBP14.63□□□□□ -0.07
MCF2L-231ENST00000494043 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-231ENST00000494043 CHMP4AQ9BY43 222 aa14.63□□□□□ -0.07
MCF2L-231ENST00000494043 KIF16BQ96L93 1317 aa14.63□□□□□ -0.07
MCF2L-231ENST00000494043 LAMB4A4D0S4 1761 aa14.62□□□□□ -0.07
MCF2L-231ENST00000494043 SBF2Q86WG5 1849 aa14.62□□□□□ -0.07
MCF2L-231ENST00000494043 PRAMEF22A3QJZ6 481 aa14.62□□□□□ -0.07
MCF2L-231ENST00000494043 TCERG1O14776 1098 aaKnown RBP14.62□□□□□ -0.07
MCF2L-231ENST00000494043 PTCD1O75127 700 aaKnown RBP14.62□□□□□ -0.07
MCF2L-231ENST00000494043 EIF2S2P20042 333 aaKnown RBP14.61□□□□□ -0.07
MCF2L-231ENST00000494043 PTF1AQ7RTS3 328 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 NECTIN2Q92692 538 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 SMARCC1Q92922 1105 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-231ENST00000494043 STK31Q9BXU1 1019 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 BTAF1O14981 1849 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 KAT6BQ8WYB5 2073 aa14.61□□□□□ -0.07
MCF2L-231ENST00000494043 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
MCF2L-231ENST00000494043 PLIN1O60240 522 aa14.6□□□□□ -0.07
MCF2L-231ENST00000494043 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-231ENST00000494043 EP400Q96L91 3159 aa14.59□□□□□ -0.07
MCF2L-231ENST00000494043 NEFLP07196 543 aa14.59□□□□□ -0.07
MCF2L-231ENST00000494043 CANXP27824 592 aaKnown RBP14.59□□□□□ -0.07
MCF2L-231ENST00000494043 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-231ENST00000494043 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
MCF2L-231ENST00000494043 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-231ENST00000494043 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
MCF2L-231ENST00000494043 ZKSCAN2Q63HK3 967 aa14.58□□□□□ -0.08
MCF2L-231ENST00000494043 PIAS4Q8N2W9 510 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-231ENST00000494043 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
MCF2L-231ENST00000494043 TEX13AQ9BXU3 409 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-231ENST00000494043 CHPF2Q9P2E5 772 aa14.58□□□□□ -0.08
MCF2L-231ENST00000494043 NOB1Q9ULX3 412 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms