RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DHX37Q8IY37 1157 aaKnown RBP17.18■□□□□ 0.34
VCP-207ENST00000493886 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
VCP-207ENST00000493886 MEIS3Q99687 375 aa17.18■□□□□ 0.34
VCP-207ENST00000493886 F6X3S4 739 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
VCP-207ENST00000493886 MST1RQ04912 1400 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 FAM208AQ9UK61 1670 aaKnown RBP17.17■□□□□ 0.34
VCP-207ENST00000493886 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
VCP-207ENST00000493886 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
VCP-207ENST00000493886 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
VCP-207ENST00000493886 NCAPD2Q15021 1401 aa17.16■□□□□ 0.34
VCP-207ENST00000493886 PLEKHO1Q53GL0 409 aaPredicted RBP17.16■□□□□ 0.34
VCP-207ENST00000493886 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
VCP-207ENST00000493886 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
VCP-207ENST00000493886 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
VCP-207ENST00000493886 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
VCP-207ENST00000493886 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
VCP-207ENST00000493886 DCCP43146 1447 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 FLIIQ13045 1269 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
VCP-207ENST00000493886 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
VCP-207ENST00000493886 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
VCP-207ENST00000493886 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
VCP-207ENST00000493886 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
VCP-207ENST00000493886 HSPA2P54652 639 aa17.12■□□□□ 0.33
VCP-207ENST00000493886 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
VCP-207ENST00000493886 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
VCP-207ENST00000493886 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
VCP-207ENST00000493886 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
VCP-207ENST00000493886 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
VCP-207ENST00000493886 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
VCP-207ENST00000493886 TEFQ10587 303 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 PXDNQ92626 1479 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 KDM3BQ7LBC6 1761 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 RGPD5Q99666 1765 aa17.11■□□□□ 0.33
VCP-207ENST00000493886 ERBB3P21860 1342 aa17.1■□□□□ 0.33
VCP-207ENST00000493886 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
VCP-207ENST00000493886 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
VCP-207ENST00000493886 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
VCP-207ENST00000493886 HMMRO75330 724 aa17.09■□□□□ 0.33
VCP-207ENST00000493886 HOXB7P09629 217 aa17.09■□□□□ 0.33
VCP-207ENST00000493886 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
VCP-207ENST00000493886 KCNQ3O43525 872 aa17.08■□□□□ 0.33
VCP-207ENST00000493886 GNAI2P04899 355 aa17.08■□□□□ 0.33
VCP-207ENST00000493886 ANTXR1Q9H6X2 564 aa17.08■□□□□ 0.32
VCP-207ENST00000493886 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
VCP-207ENST00000493886 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
VCP-207ENST00000493886 GNAI3P08754 354 aa17.07■□□□□ 0.32
VCP-207ENST00000493886 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
VCP-207ENST00000493886 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
VCP-207ENST00000493886 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
VCP-207ENST00000493886 N4BP2Q86UW6 1770 aaPredicted RBP17.06■□□□□ 0.32
VCP-207ENST00000493886 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
VCP-207ENST00000493886 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
VCP-207ENST00000493886 GZF1Q9H116 711 aaPredicted RBP17.05■□□□□ 0.32
VCP-207ENST00000493886 APBB1O00213 710 aa17.05■□□□□ 0.32
VCP-207ENST00000493886 GSPT1P15170 499 aaKnown RBP17.05■□□□□ 0.32
VCP-207ENST00000493886 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
VCP-207ENST00000493886 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
VCP-207ENST00000493886 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
VCP-207ENST00000493886 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
VCP-207ENST00000493886 CHPF2Q9P2E5 772 aa17.04■□□□□ 0.32
VCP-207ENST00000493886 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
VCP-207ENST00000493886 RBM25P49756 843 aaKnown RBP17.03■□□□□ 0.32
VCP-207ENST00000493886 OTUD7AQ8TE49 926 aaPredicted RBP17.03■□□□□ 0.32
VCP-207ENST00000493886 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
VCP-207ENST00000493886 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
VCP-207ENST00000493886 CDC45O75419 566 aa17.03■□□□□ 0.32
VCP-207ENST00000493886 COL18A1P39060 1754 aa17.02■□□□□ 0.32
VCP-207ENST00000493886 USP44Q9H0E7 712 aa17.02■□□□□ 0.32
VCP-207ENST00000493886 SPATA31A3Q5VYP0 1347 aa17.02■□□□□ 0.32
VCP-207ENST00000493886 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
VCP-207ENST00000493886 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
VCP-207ENST00000493886 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
VCP-207ENST00000493886 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
VCP-207ENST00000493886 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
VCP-207ENST00000493886 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
VCP-207ENST00000493886 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
VCP-207ENST00000493886 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
VCP-207ENST00000493886 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
VCP-207ENST00000493886 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
VCP-207ENST00000493886 CHRNA2Q15822 529 aa17■□□□□ 0.31
VCP-207ENST00000493886 SRCIN1Q9C0H9 1055 aa17■□□□□ 0.31
VCP-207ENST00000493886 HEG1Q9ULI3 1381 aa17■□□□□ 0.31
VCP-207ENST00000493886 ANXA1P04083 346 aa17■□□□□ 0.31
VCP-207ENST00000493886 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
VCP-207ENST00000493886 CRYBG1Q9Y4K1 1723 aa17■□□□□ 0.31
VCP-207ENST00000493886 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
VCP-207ENST00000493886 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 549.1 ms