RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 N4BP2Q86UW6 1770 aaPredicted RBP10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 SCN11AQ9UI33 1791 aa10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 PHF14O94880 888 aa10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 EIF4A2Q14240 407 aaKnown RBP10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
SEMA3F-209ENST00000493743 BRCA1P38398 1863 aaKnown RBP10.75□□□□□ -0.69
SEMA3F-209ENST00000493743 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
SEMA3F-209ENST00000493743 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
SEMA3F-209ENST00000493743 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
SEMA3F-209ENST00000493743 CICQ96RK0 1608 aaPredicted RBP10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 GNPATO15228 680 aa10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 IGSF1Q8N6C5 1336 aa10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 KDRP35968 1356 aa10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 ATP10DQ9P241 1426 aa10.74□□□□□ -0.69
SEMA3F-209ENST00000493743 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
SEMA3F-209ENST00000493743 ITPK1Q13572 414 aa10.73□□□□□ -0.69
SEMA3F-209ENST00000493743 SMIM5Q71RC9 77 aa10.73□□□□□ -0.69
SEMA3F-209ENST00000493743 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
SEMA3F-209ENST00000493743 TJP1Q07157 1748 aa10.72□□□□□ -0.69
SEMA3F-209ENST00000493743 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
SEMA3F-209ENST00000493743 GOLGB1Q14789 3259 aaKnown RBP10.72□□□□□ -0.69
SEMA3F-209ENST00000493743 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
SEMA3F-209ENST00000493743 ADCY9O60503 1353 aa10.72□□□□□ -0.69
SEMA3F-209ENST00000493743 ERVV-2B6SEH9 535 aa10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 KDM6AO15550 1401 aaPredicted RBP10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 DCAF5Q96JK2 942 aa10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 PANK3Q9H999 370 aa10.71□□□□□ -0.69
SEMA3F-209ENST00000493743 AMOTQ4VCS5 1084 aa10.7□□□□□ -0.7
SEMA3F-209ENST00000493743 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
SEMA3F-209ENST00000493743 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
SEMA3F-209ENST00000493743 RTN4Q9NQC3 1192 aaKnown RBP10.7□□□□□ -0.7
SEMA3F-209ENST00000493743 RTCBQ9Y3I0 505 aaKnown RBP10.7□□□□□ -0.7
SEMA3F-209ENST00000493743 PXDNLA1KZ92 1463 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 CNTNAP4Q9C0A0 1308 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 MMP10P09238 476 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 ADRA2BP18089 450 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 TRAPPC3LQ5T215 181 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 RC3H1Q5TC82 1133 aaKnown RBP10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 MORC1Q86VD1 984 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
SEMA3F-209ENST00000493743 C10orf71Q711Q0 1435 aa10.68□□□□□ -0.7
SEMA3F-209ENST00000493743 CABP4P57796 275 aa10.68□□□□□ -0.7
SEMA3F-209ENST00000493743 NLGN1Q8N2Q7 840 aa10.68□□□□□ -0.7
SEMA3F-209ENST00000493743 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
SEMA3F-209ENST00000493743 ADAMTS7Q9UKP4 1686 aa10.67□□□□□ -0.7
SEMA3F-209ENST00000493743 MTHFSP49914 203 aa10.67□□□□□ -0.7
SEMA3F-209ENST00000493743 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
SEMA3F-209ENST00000493743 AFDNP55196 1824 aaKnown RBP10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 RPS6KA4O75676 772 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 RFC4P35249 363 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 TGFB2P61812 414 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 ZNF526Q8TF50 670 aaPredicted RBP10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 SBF1O95248 1867 aa10.66□□□□□ -0.7
SEMA3F-209ENST00000493743 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 GYS1P13807 737 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 SULT6B1Q6IMI4 303 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 PARP3Q9Y6F1 533 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 MRC1P22897 1456 aa10.65□□□□□ -0.7
SEMA3F-209ENST00000493743 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.71
SEMA3F-209ENST00000493743 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
SEMA3F-209ENST00000493743 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
SEMA3F-209ENST00000493743 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
SEMA3F-209ENST00000493743 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
SEMA3F-209ENST00000493743 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
SEMA3F-209ENST00000493743 IL13P35225 146 aa10.63□□□□□ -0.71
SEMA3F-209ENST00000493743 CRKLP46109 303 aaKnown RBP10.63□□□□□ -0.71
SEMA3F-209ENST00000493743 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
SEMA3F-209ENST00000493743 NRXN2Q9P2S2 1712 aa10.62□□□□□ -0.71
SEMA3F-209ENST00000493743 HSPA6P17066 643 aa10.62□□□□□ -0.71
SEMA3F-209ENST00000493743 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
SEMA3F-209ENST00000493743 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 TNRC6CQ9HCJ0 1690 aaKnown RBP10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 KIF3CO14782 793 aa10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 FCHSD2O94868 740 aa10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 DPEP1P16444 411 aa10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
SEMA3F-209ENST00000493743 FKBP8Q14318 412 aa10.6□□□□□ -0.71
SEMA3F-209ENST00000493743 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
SEMA3F-209ENST00000493743 SLC52A2Q9HAB3 445 aa10.6□□□□□ -0.71
SEMA3F-209ENST00000493743 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
SEMA3F-209ENST00000493743 WDR90Q96KV7 1748 aa10.6□□□□□ -0.71
SEMA3F-209ENST00000493743 KIF7Q2M1P5 1343 aa10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 DDR1Q08345 913 aa10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 DNAJC10Q8IXB1 793 aa10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 PIM2Q9P1W9 311 aa10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
SEMA3F-209ENST00000493743 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.71
SEMA3F-209ENST00000493743 CACNA1SQ13698 1873 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms