RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 INSRP06213 1382 aa14.67□□□□□ -0.06
COL6A3-214ENST00000493608 FLT4P35916 1363 aa14.67□□□□□ -0.06
COL6A3-214ENST00000493608 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
COL6A3-214ENST00000493608 MEGF6O75095 1541 aa14.66□□□□□ -0.06
COL6A3-214ENST00000493608 SMG6Q86US8 1419 aaKnown RBP14.66□□□□□ -0.06
COL6A3-214ENST00000493608 POLKQ9UBT6 870 aa14.65□□□□□ -0.06
COL6A3-214ENST00000493608 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-214ENST00000493608 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
COL6A3-214ENST00000493608 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-214ENST00000493608 RAPGEF4Q8WZA2 1011 aa14.64□□□□□ -0.07
COL6A3-214ENST00000493608 SYTL4Q96C24 671 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-214ENST00000493608 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-214ENST00000493608 NHSQ6T4R5 1651 aa14.64□□□□□ -0.07
COL6A3-214ENST00000493608 BTAF1O14981 1849 aa14.64□□□□□ -0.07
COL6A3-214ENST00000493608 KIF7Q2M1P5 1343 aa14.64□□□□□ -0.07
COL6A3-214ENST00000493608 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
COL6A3-214ENST00000493608 ANKRD26Q9UPS8 1709 aa14.63□□□□□ -0.07
COL6A3-214ENST00000493608 RGPD3A6NKT7 1758 aaPredicted RBP14.63□□□□□ -0.07
COL6A3-214ENST00000493608 RGPD4Q7Z3J3 1758 aa14.63□□□□□ -0.07
COL6A3-214ENST00000493608 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
COL6A3-214ENST00000493608 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
COL6A3-214ENST00000493608 KIF24Q5T7B8 1368 aa14.62□□□□□ -0.07
COL6A3-214ENST00000493608 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
COL6A3-214ENST00000493608 EYA1Q99502 592 aa14.61□□□□□ -0.07
COL6A3-214ENST00000493608 PDGFDQ9GZP0 370 aaPredicted RBP14.61□□□□□ -0.07
COL6A3-214ENST00000493608 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
COL6A3-214ENST00000493608 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
COL6A3-214ENST00000493608 LRP5O75197 1615 aa14.61□□□□□ -0.07
COL6A3-214ENST00000493608 SEC24BO95487 1268 aa14.6□□□□□ -0.07
COL6A3-214ENST00000493608 MAMSTRQ6ZN01 415 aa14.6□□□□□ -0.07
COL6A3-214ENST00000493608 DOT1LQ8TEK3 1739 aa14.6□□□□□ -0.07
COL6A3-214ENST00000493608 KCNQ4P56696 695 aa14.59□□□□□ -0.07
COL6A3-214ENST00000493608 EIF4A2Q14240 407 aaKnown RBP14.59□□□□□ -0.07
COL6A3-214ENST00000493608 STK32BQ9NY57 414 aa14.59□□□□□ -0.07
COL6A3-214ENST00000493608 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
COL6A3-214ENST00000493608 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.08
COL6A3-214ENST00000493608 LRRC4BQ9NT99 713 aa14.58□□□□□ -0.08
COL6A3-214ENST00000493608 CYP27B1O15528 508 aa14.57□□□□□ -0.08
COL6A3-214ENST00000493608 SLC15A2Q16348 729 aa14.57□□□□□ -0.08
COL6A3-214ENST00000493608 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
COL6A3-214ENST00000493608 NSD2O96028 1365 aa14.56□□□□□ -0.08
COL6A3-214ENST00000493608 ZBTB7AO95365 584 aa14.55□□□□□ -0.08
COL6A3-214ENST00000493608 SPON1Q9HCB6 807 aa14.55□□□□□ -0.08
COL6A3-214ENST00000493608 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
COL6A3-214ENST00000493608 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
COL6A3-214ENST00000493608 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
COL6A3-214ENST00000493608 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
COL6A3-214ENST00000493608 MPRIPQ6WCQ1 1025 aa14.54□□□□□ -0.08
COL6A3-214ENST00000493608 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
COL6A3-214ENST00000493608 ZNF827Q17R98 1081 aa14.53□□□□□ -0.08
COL6A3-214ENST00000493608 SPG7Q9UQ90 795 aa14.53□□□□□ -0.08
COL6A3-214ENST00000493608 ITGB4P16144 1822 aa14.52□□□□□ -0.08
COL6A3-214ENST00000493608 CASZ1Q86V15 1759 aa14.52□□□□□ -0.08
COL6A3-214ENST00000493608 PSEN1P49768 467 aa14.52□□□□□ -0.09
COL6A3-214ENST00000493608 PPP1R1BQ9UD71 204 aaPredicted RBP14.52□□□□□ -0.09
COL6A3-214ENST00000493608 PKD1L3Q7Z443 1732 aa14.52□□□□□ -0.09
COL6A3-214ENST00000493608 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
COL6A3-214ENST00000493608 LY75O60449 1722 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 TOGARAM1Q9Y4F4 1720 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 SLC27A3Q5K4L6 730 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
COL6A3-214ENST00000493608 PAPPAQ13219 1627 aa14.5□□□□□ -0.09
COL6A3-214ENST00000493608 PLCG2P16885 1265 aa14.49□□□□□ -0.09
COL6A3-214ENST00000493608 MTHFSP49914 203 aa14.49□□□□□ -0.09
COL6A3-214ENST00000493608 IFNL2Q8IZJ0 200 aa14.49□□□□□ -0.09
COL6A3-214ENST00000493608 PIGBQ92521 554 aa14.49□□□□□ -0.09
COL6A3-214ENST00000493608 PHKG2P15735 406 aa14.48□□□□□ -0.09
COL6A3-214ENST00000493608 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
COL6A3-214ENST00000493608 NKX1-1Q15270 411 aaPredicted RBP14.48□□□□□ -0.09
COL6A3-214ENST00000493608 SULT6B1Q6IMI4 303 aa14.48□□□□□ -0.09
COL6A3-214ENST00000493608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.48□□□□□ -0.09
COL6A3-214ENST00000493608 TFCP2L1Q9NZI6 479 aa14.48□□□□□ -0.09
COL6A3-214ENST00000493608 IL13P35225 146 aa14.47□□□□□ -0.09
COL6A3-214ENST00000493608 PTGER2P43116 358 aa14.47□□□□□ -0.09
COL6A3-214ENST00000493608 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
COL6A3-214ENST00000493608 TUBGCP6Q96RT7 1819 aa14.47□□□□□ -0.09
COL6A3-214ENST00000493608 PLEKHO1Q53GL0 409 aaPredicted RBP14.46□□□□□ -0.09
COL6A3-214ENST00000493608 PALLDQ8WX93 1383 aa14.46□□□□□ -0.1
COL6A3-214ENST00000493608 PNPLA7Q6ZV29 1317 aa14.45□□□□□ -0.1
COL6A3-214ENST00000493608 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
COL6A3-214ENST00000493608 MTFR1LQ9H019 292 aa14.45□□□□□ -0.1
COL6A3-214ENST00000493608 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
COL6A3-214ENST00000493608 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
COL6A3-214ENST00000493608 HMOX1P09601 288 aa14.44□□□□□ -0.1
COL6A3-214ENST00000493608 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
COL6A3-214ENST00000493608 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-214ENST00000493608 AMOTQ4VCS5 1084 aa14.42□□□□□ -0.1
COL6A3-214ENST00000493608 SMIM5Q71RC9 77 aa14.42□□□□□ -0.1
COL6A3-214ENST00000493608 C5P01031 1676 aa14.42□□□□□ -0.1
COL6A3-214ENST00000493608 QSER1Q2KHR3 1735 aa14.41□□□□□ -0.1
COL6A3-214ENST00000493608 DIAPH1O60610 1272 aaKnown RBP14.41□□□□□ -0.1
COL6A3-214ENST00000493608 C1orf141Q5JVX7 400 aa14.41□□□□□ -0.1
COL6A3-214ENST00000493608 COL23A1Q86Y22 540 aaPredicted RBP14.41□□□□□ -0.1
COL6A3-214ENST00000493608 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
COL6A3-214ENST00000493608 ATG3Q9NT62 314 aa14.41□□□□□ -0.1
COL6A3-214ENST00000493608 LOC102724428A0A0B4J2F2 783 aa14.4□□□□□ -0.1
COL6A3-214ENST00000493608 SIK1P57059 783 aa14.4□□□□□ -0.1
COL6A3-214ENST00000493608 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms