RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
SGIP1-213ENST00000493564 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
SGIP1-213ENST00000493564 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
SGIP1-213ENST00000493564 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
SGIP1-213ENST00000493564 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
SGIP1-213ENST00000493564 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
SGIP1-213ENST00000493564 LY75O60449 1722 aa12.61□□□□□ -0.39
SGIP1-213ENST00000493564 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
SGIP1-213ENST00000493564 FCHSD2O94868 740 aa12.6□□□□□ -0.39
SGIP1-213ENST00000493564 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
SGIP1-213ENST00000493564 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
SGIP1-213ENST00000493564 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
SGIP1-213ENST00000493564 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
SGIP1-213ENST00000493564 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 PHF14O94880 888 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 PTGER2P43116 358 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 AMIGO3Q86WK7 504 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 AK7Q96M32 723 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
SGIP1-213ENST00000493564 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
SGIP1-213ENST00000493564 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
SGIP1-213ENST00000493564 MSL1Q68DK7 614 aa12.57□□□□□ -0.4
SGIP1-213ENST00000493564 MCM10Q7L590 875 aa12.57□□□□□ -0.4
SGIP1-213ENST00000493564 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
SGIP1-213ENST00000493564 LRP5O75197 1615 aa12.56□□□□□ -0.4
SGIP1-213ENST00000493564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
SGIP1-213ENST00000493564 GNPATO15228 680 aa12.56□□□□□ -0.4
SGIP1-213ENST00000493564 TEFQ10587 303 aa12.56□□□□□ -0.4
SGIP1-213ENST00000493564 PRKRIP1Q9H875 184 aaPredicted RBP12.56□□□□□ -0.4
SGIP1-213ENST00000493564 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
SGIP1-213ENST00000493564 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
SGIP1-213ENST00000493564 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
SGIP1-213ENST00000493564 C5P01031 1676 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 KCNQ3O43525 872 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 NEFMP07197 916 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
SGIP1-213ENST00000493564 DNAJC10Q8IXB1 793 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 PLEKHF1Q96S99 279 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
SGIP1-213ENST00000493564 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 POLD1P28340 1107 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 FLAD1Q8NFF5 587 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 ARXQ96QS3 562 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
SGIP1-213ENST00000493564 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
SGIP1-213ENST00000493564 BTBD11A6QL63 1104 aa12.52□□□□□ -0.41
SGIP1-213ENST00000493564 TTC5Q8N0Z6 440 aa12.52□□□□□ -0.41
SGIP1-213ENST00000493564 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.41
SGIP1-213ENST00000493564 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
SGIP1-213ENST00000493564 SSFA2P28290 1259 aa12.51□□□□□ -0.41
SGIP1-213ENST00000493564 CRKLP46109 303 aaKnown RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 RC3H1Q5TC82 1133 aaKnown RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
SGIP1-213ENST00000493564 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
SGIP1-213ENST00000493564 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
SGIP1-213ENST00000493564 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.41
SGIP1-213ENST00000493564 NFE2L2Q16236 605 aa12.5□□□□□ -0.41
SGIP1-213ENST00000493564 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
SGIP1-213ENST00000493564 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
SGIP1-213ENST00000493564 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
SGIP1-213ENST00000493564 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
SGIP1-213ENST00000493564 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
SGIP1-213ENST00000493564 VIRMAQ69YN4 1812 aaKnown RBP12.5□□□□□ -0.41
SGIP1-213ENST00000493564 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
SGIP1-213ENST00000493564 RFC4P35249 363 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 RIPK4P57078 832 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
SGIP1-213ENST00000493564 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
SGIP1-213ENST00000493564 MRC1P22897 1456 aa12.48□□□□□ -0.41
SGIP1-213ENST00000493564 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
SGIP1-213ENST00000493564 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
SGIP1-213ENST00000493564 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
SGIP1-213ENST00000493564 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
SGIP1-213ENST00000493564 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
SGIP1-213ENST00000493564 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
SGIP1-213ENST00000493564 UBR3Q6ZT12 1888 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 ZBTB1Q9Y2K1 713 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 ADAMTS7Q9UKP4 1686 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
SGIP1-213ENST00000493564 SENP3-EIF4A1A0A087X0R7 540 aa12.46□□□□□ -0.41
SGIP1-213ENST00000493564 ANP32CO43423 234 aa12.46□□□□□ -0.41
SGIP1-213ENST00000493564 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
SGIP1-213ENST00000493564 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
SGIP1-213ENST00000493564 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
SGIP1-213ENST00000493564 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
SGIP1-213ENST00000493564 STARD3NLO95772 234 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms