RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
PRPF3-206ENST00000493553 FUT2Q10981 343 aa13.28□□□□□ -0.28
PRPF3-206ENST00000493553 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
PRPF3-206ENST00000493553 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
PRPF3-206ENST00000493553 GGCXP38435 758 aa13.27□□□□□ -0.29
PRPF3-206ENST00000493553 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
PRPF3-206ENST00000493553 MORN1Q5T089 497 aa13.27□□□□□ -0.29
PRPF3-206ENST00000493553 SCUBE3Q8IX30 993 aa13.27□□□□□ -0.29
PRPF3-206ENST00000493553 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
PRPF3-206ENST00000493553 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.29
PRPF3-206ENST00000493553 TLL1O43897 1013 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 MYOM1P52179 1685 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 AMHR2Q16671 573 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 CFAP53Q96M91 514 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
PRPF3-206ENST00000493553 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
PRPF3-206ENST00000493553 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
PRPF3-206ENST00000493553 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
PRPF3-206ENST00000493553 PTPRMP28827 1452 aa13.25□□□□□ -0.29
PRPF3-206ENST00000493553 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
PRPF3-206ENST00000493553 NUTM2DQ5VT03 806 aaPredicted RBP13.25□□□□□ -0.29
PRPF3-206ENST00000493553 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
PRPF3-206ENST00000493553 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
PRPF3-206ENST00000493553 STK26Q9P289 416 aa13.25□□□□□ -0.29
PRPF3-206ENST00000493553 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
PRPF3-206ENST00000493553 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
PRPF3-206ENST00000493553 ADH1BP00325 375 aa13.24□□□□□ -0.29
PRPF3-206ENST00000493553 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
PRPF3-206ENST00000493553 TECPR2O15040 1411 aa13.23□□□□□ -0.29
PRPF3-206ENST00000493553 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
PRPF3-206ENST00000493553 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
PRPF3-206ENST00000493553 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
PRPF3-206ENST00000493553 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
PRPF3-206ENST00000493553 AK7Q96M32 723 aa13.22□□□□□ -0.29
PRPF3-206ENST00000493553 REPIN1Q9BWE0 567 aaKnown RBP13.22□□□□□ -0.29
PRPF3-206ENST00000493553 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
PRPF3-206ENST00000493553 MED14O60244 1454 aa13.21□□□□□ -0.3
PRPF3-206ENST00000493553 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
PRPF3-206ENST00000493553 KDM4AO75164 1064 aa13.2□□□□□ -0.3
PRPF3-206ENST00000493553 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
PRPF3-206ENST00000493553 SLC27A5Q9Y2P5 690 aa13.2□□□□□ -0.3
PRPF3-206ENST00000493553 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
PRPF3-206ENST00000493553 TRIM66O15016 1216 aa13.19□□□□□ -0.3
PRPF3-206ENST00000493553 USP46P62068 366 aa13.19□□□□□ -0.3
PRPF3-206ENST00000493553 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-206ENST00000493553 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
PRPF3-206ENST00000493553 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-206ENST00000493553 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
PRPF3-206ENST00000493553 SPSB2Q99619 263 aa13.18□□□□□ -0.3
PRPF3-206ENST00000493553 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
PRPF3-206ENST00000493553 ATP7BP35670 1465 aa13.17□□□□□ -0.3
PRPF3-206ENST00000493553 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
PRPF3-206ENST00000493553 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
PRPF3-206ENST00000493553 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
PRPF3-206ENST00000493553 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-206ENST00000493553 S1PR4O95977 384 aa13.16□□□□□ -0.3
PRPF3-206ENST00000493553 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-206ENST00000493553 TXNDC2Q86VQ3 553 aa13.16□□□□□ -0.3
PRPF3-206ENST00000493553 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
PRPF3-206ENST00000493553 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-206ENST00000493553 SLIT1O75093 1534 aa13.16□□□□□ -0.3
PRPF3-206ENST00000493553 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
PRPF3-206ENST00000493553 SAFB2Q14151 953 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRPF3-206ENST00000493553 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
PRPF3-206ENST00000493553 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
PRPF3-206ENST00000493553 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
PRPF3-206ENST00000493553 CPS1P31327 1500 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 BRICD5Q6PL45 260 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 ANKLE1Q8NAG6 615 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 PIK3R4Q99570 1358 aa13.14□□□□□ -0.31
PRPF3-206ENST00000493553 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
PRPF3-206ENST00000493553 HOXA2O43364 376 aa13.13□□□□□ -0.31
PRPF3-206ENST00000493553 Q3C1V9 767 aa13.13□□□□□ -0.31
PRPF3-206ENST00000493553 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
PRPF3-206ENST00000493553 METP08581 1390 aa13.12□□□□□ -0.31
PRPF3-206ENST00000493553 PARP9Q8IXQ6 854 aa13.12□□□□□ -0.31
PRPF3-206ENST00000493553 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
PRPF3-206ENST00000493553 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 NUTM1Q86Y26 1132 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-206ENST00000493553 RUNDC1Q96C34 613 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 IRX2Q9BZI1 471 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-206ENST00000493553 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
PRPF3-206ENST00000493553 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
PRPF3-206ENST00000493553 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
PRPF3-206ENST00000493553 E9PSI1 815 aa13.1□□□□□ -0.31
PRPF3-206ENST00000493553 MTHFSP49914 203 aa13.1□□□□□ -0.31
PRPF3-206ENST00000493553 FYB1O15117 783 aa13.09□□□□□ -0.31
PRPF3-206ENST00000493553 PTCH1Q13635 1447 aa13.09□□□□□ -0.31
PRPF3-206ENST00000493553 CCDC27Q2M243 656 aa13.09□□□□□ -0.31
PRPF3-206ENST00000493553 RNF19BQ6ZMZ0 732 aa13.09□□□□□ -0.31
PRPF3-206ENST00000493553 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms