RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NLGN2Q8NFZ4 835 aa15.48■□□□□ 0.07
CTSA-209ENST00000493522 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
CTSA-209ENST00000493522 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
CTSA-209ENST00000493522 GRIN3BO60391 1043 aa15.47■□□□□ 0.07
CTSA-209ENST00000493522 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
CTSA-209ENST00000493522 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTSA-209ENST00000493522 COL23A1Q86Y22 540 aaPredicted RBP15.46■□□□□ 0.07
CTSA-209ENST00000493522 PLEKHO1Q53GL0 409 aaPredicted RBP15.45■□□□□ 0.06
CTSA-209ENST00000493522 FLAD1Q8NFF5 587 aa15.45■□□□□ 0.06
CTSA-209ENST00000493522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTSA-209ENST00000493522 CYP27B1O15528 508 aa15.44■□□□□ 0.06
CTSA-209ENST00000493522 ZNF530Q6P9A1 599 aaPredicted RBP15.44■□□□□ 0.06
CTSA-209ENST00000493522 PALLDQ8WX93 1383 aa15.44■□□□□ 0.06
CTSA-209ENST00000493522 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
CTSA-209ENST00000493522 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
CTSA-209ENST00000493522 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
CTSA-209ENST00000493522 MSL1Q68DK7 614 aa15.43■□□□□ 0.06
CTSA-209ENST00000493522 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
CTSA-209ENST00000493522 C5P01031 1676 aa15.43■□□□□ 0.06
CTSA-209ENST00000493522 YBX3P16989 372 aaKnown RBP eCLIP15.42■□□□□ 0.06
CTSA-209ENST00000493522 MPRIPQ6WCQ1 1025 aa15.42■□□□□ 0.06
CTSA-209ENST00000493522 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
CTSA-209ENST00000493522 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
CTSA-209ENST00000493522 PHKG2P15735 406 aa15.41■□□□□ 0.06
CTSA-209ENST00000493522 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTSA-209ENST00000493522 C1orf141Q5JVX7 400 aa15.41■□□□□ 0.06
CTSA-209ENST00000493522 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
CTSA-209ENST00000493522 CD2APQ9Y5K6 639 aa15.41■□□□□ 0.06
CTSA-209ENST00000493522 AK7Q96M32 723 aa15.4■□□□□ 0.06
CTSA-209ENST00000493522 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
CTSA-209ENST00000493522 FCHSD2O94868 740 aa15.39■□□□□ 0.05
CTSA-209ENST00000493522 NEFMP07197 916 aa15.38■□□□□ 0.05
CTSA-209ENST00000493522 HSP90AB1P08238 724 aaKnown RBP15.38■□□□□ 0.05
CTSA-209ENST00000493522 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
CTSA-209ENST00000493522 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
CTSA-209ENST00000493522 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
CTSA-209ENST00000493522 TAF1LQ8IZX4 1826 aa15.38■□□□□ 0.05
CTSA-209ENST00000493522 C4BP0C0L5 1744 aa15.37■□□□□ 0.05
CTSA-209ENST00000493522 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
CTSA-209ENST00000493522 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
CTSA-209ENST00000493522 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
CTSA-209ENST00000493522 MRC1P22897 1456 aa15.37■□□□□ 0.05
CTSA-209ENST00000493522 AKAP4Q5JQC9 854 aa15.36■□□□□ 0.05
CTSA-209ENST00000493522 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
CTSA-209ENST00000493522 ATP10DQ9P241 1426 aa15.35■□□□□ 0.05
CTSA-209ENST00000493522 PHF14O94880 888 aa15.35■□□□□ 0.05
CTSA-209ENST00000493522 DIEXFQ68CQ4 756 aaKnown RBP15.35■□□□□ 0.05
CTSA-209ENST00000493522 PIGBQ92521 554 aa15.35■□□□□ 0.05
CTSA-209ENST00000493522 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
CTSA-209ENST00000493522 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
CTSA-209ENST00000493522 UBR2Q8IWV8 1755 aa15.34■□□□□ 0.05
CTSA-209ENST00000493522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
CTSA-209ENST00000493522 SSFA2P28290 1259 aa15.34■□□□□ 0.05
CTSA-209ENST00000493522 GPBP1L1Q9HC44 474 aaPredicted RBP15.34■□□□□ 0.05
CTSA-209ENST00000493522 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
CTSA-209ENST00000493522 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
CTSA-209ENST00000493522 SIK1P57059 783 aa15.33■□□□□ 0.04
CTSA-209ENST00000493522 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.04
CTSA-209ENST00000493522 UBR3Q6ZT12 1888 aa15.32■□□□□ 0.04
CTSA-209ENST00000493522 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
CTSA-209ENST00000493522 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
CTSA-209ENST00000493522 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
CTSA-209ENST00000493522 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
CTSA-209ENST00000493522 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 CABP4P57796 275 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 LINC00116Q8NCU8 138 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 ADCY9O60503 1353 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 ZNF831Q5JPB2 1677 aa15.31■□□□□ 0.04
CTSA-209ENST00000493522 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
CTSA-209ENST00000493522 GNPATO15228 680 aa15.3■□□□□ 0.04
CTSA-209ENST00000493522 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
CTSA-209ENST00000493522 TJP1Q07157 1748 aa15.3■□□□□ 0.04
CTSA-209ENST00000493522 CICQ96RK0 1608 aaPredicted RBP15.29■□□□□ 0.04
CTSA-209ENST00000493522 ATP6V1AP38606 617 aa15.29■□□□□ 0.04
CTSA-209ENST00000493522 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
CTSA-209ENST00000493522 RUNDC1Q96C34 613 aa15.29■□□□□ 0.04
CTSA-209ENST00000493522 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
CTSA-209ENST00000493522 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
CTSA-209ENST00000493522 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
CTSA-209ENST00000493522 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
CTSA-209ENST00000493522 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
CTSA-209ENST00000493522 TEFQ10587 303 aa15.27■□□□□ 0.04
CTSA-209ENST00000493522 ITPK1Q13572 414 aa15.27■□□□□ 0.04
CTSA-209ENST00000493522 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
CTSA-209ENST00000493522 SLC52A2Q9HAB3 445 aa15.27■□□□□ 0.04
CTSA-209ENST00000493522 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.04
CTSA-209ENST00000493522 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
CTSA-209ENST00000493522 CEMIPQ8WUJ3 1361 aa15.26■□□□□ 0.03
CTSA-209ENST00000493522 MCM10Q7L590 875 aa15.26■□□□□ 0.03
CTSA-209ENST00000493522 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
CTSA-209ENST00000493522 RRP7AQ9Y3A4 280 aaKnown RBP15.26■□□□□ 0.03
CTSA-209ENST00000493522 MMP10P09238 476 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
CTSA-209ENST00000493522 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 NEUROD2Q15784 382 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 FAM9BQ8IZU0 186 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 IL17REQ8NFR9 667 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
CTSA-209ENST00000493522 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms