RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ZNF521Q96K83 1311 aa15.07■□□□□ 0
LSM2-214ENST00000493387 MRC1P22897 1456 aa15.07■□□□□ 0
LSM2-214ENST00000493387 SENP3-EIF4A1A0A087X0R7 540 aa15.06■□□□□ 0
LSM2-214ENST00000493387 GOLGA2Q08379 1002 aa15.06■□□□□ 0
LSM2-214ENST00000493387 PIGBQ92521 554 aa15.06■□□□□ 0
LSM2-214ENST00000493387 CFAP44Q96MT7 982 aa15.06■□□□□ 0
LSM2-214ENST00000493387 BTBD11A6QL63 1104 aa15.05■□□□□ -0
LSM2-214ENST00000493387 SMARCC1Q92922 1105 aaPredicted RBP15.05■□□□□ -0
LSM2-214ENST00000493387 E9PSI1 815 aa15.04■□□□□ -0
LSM2-214ENST00000493387 CHL1O00533 1208 aa15.04■□□□□ -0
LSM2-214ENST00000493387 KCNQ2O43526 872 aa15.04■□□□□ -0
LSM2-214ENST00000493387 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
LSM2-214ENST00000493387 TRIM37O94972 964 aa15.03■□□□□ -0
LSM2-214ENST00000493387 ZNF853P0CG23 659 aa15.03■□□□□ -0
LSM2-214ENST00000493387 CCDC125Q86Z20 511 aa15.03■□□□□ -0
LSM2-214ENST00000493387 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
LSM2-214ENST00000493387 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
LSM2-214ENST00000493387 LAS1LQ9Y4W2 734 aaKnown RBP15.03■□□□□ -0
LSM2-214ENST00000493387 HMGB2P26583 209 aaKnown RBP15.02■□□□□ -0
LSM2-214ENST00000493387 DOT1LQ8TEK3 1739 aa15.02□□□□□ -0.01
LSM2-214ENST00000493387 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
LSM2-214ENST00000493387 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
LSM2-214ENST00000493387 SF3B2Q13435 895 aaKnown RBP15.01□□□□□ -0.01
LSM2-214ENST00000493387 ZNF790Q6PG37 636 aa15.01□□□□□ -0.01
LSM2-214ENST00000493387 YTHDC1Q96MU7 727 aaKnown RBP15.01□□□□□ -0.01
LSM2-214ENST00000493387 SLFN5Q08AF3 891 aa15□□□□□ -0.01
LSM2-214ENST00000493387 ATG3Q9NT62 314 aa15□□□□□ -0.01
LSM2-214ENST00000493387 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
LSM2-214ENST00000493387 ITGB4P16144 1822 aa15□□□□□ -0.01
LSM2-214ENST00000493387 VIRMAQ69YN4 1812 aaKnown RBP15□□□□□ -0.01
LSM2-214ENST00000493387 SBF2Q86WG5 1849 aa15□□□□□ -0.01
LSM2-214ENST00000493387 SLC39A6Q13433 755 aa14.99□□□□□ -0.01
LSM2-214ENST00000493387 ILDR2Q71H61 639 aa14.99□□□□□ -0.01
LSM2-214ENST00000493387 FMNL2Q96PY5 1086 aa14.99□□□□□ -0.01
LSM2-214ENST00000493387 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
LSM2-214ENST00000493387 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
LSM2-214ENST00000493387 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
LSM2-214ENST00000493387 PLSCR1O15162 318 aa14.98□□□□□ -0.01
LSM2-214ENST00000493387 APBA3O96018 575 aa14.98□□□□□ -0.01
LSM2-214ENST00000493387 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
LSM2-214ENST00000493387 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
LSM2-214ENST00000493387 EIF4A1P60842 406 aaKnown RBP14.97□□□□□ -0.01
LSM2-214ENST00000493387 PTF1AQ7RTS3 328 aa14.97□□□□□ -0.01
LSM2-214ENST00000493387 TRMT2AQ8IZ69 625 aaKnown RBP14.97□□□□□ -0.01
LSM2-214ENST00000493387 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
LSM2-214ENST00000493387 TEX13AQ9BXU3 409 aaPredicted RBP14.97□□□□□ -0.01
LSM2-214ENST00000493387 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
LSM2-214ENST00000493387 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
LSM2-214ENST00000493387 KCNQ3O43525 872 aa14.96□□□□□ -0.01
LSM2-214ENST00000493387 BAG6P46379 1132 aa14.96□□□□□ -0.01
LSM2-214ENST00000493387 CDCA7LQ96GN5 454 aa14.96□□□□□ -0.01
LSM2-214ENST00000493387 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
LSM2-214ENST00000493387 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
LSM2-214ENST00000493387 BTAF1O14981 1849 aa14.95□□□□□ -0.02
LSM2-214ENST00000493387 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
LSM2-214ENST00000493387 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
LSM2-214ENST00000493387 HOXB7P09629 217 aa14.95□□□□□ -0.02
LSM2-214ENST00000493387 SNRPA1P09661 255 aaKnown RBP14.95□□□□□ -0.02
LSM2-214ENST00000493387 SIK1P57059 783 aa14.95□□□□□ -0.02
LSM2-214ENST00000493387 SLC27A3Q5K4L6 730 aa14.95□□□□□ -0.02
LSM2-214ENST00000493387 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
LSM2-214ENST00000493387 ZNF496Q96IT1 587 aaPredicted RBP14.95□□□□□ -0.02
LSM2-214ENST00000493387 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
LSM2-214ENST00000493387 HEG1Q9ULI3 1381 aa14.94□□□□□ -0.02
LSM2-214ENST00000493387 PAPPAQ13219 1627 aa14.93□□□□□ -0.02
LSM2-214ENST00000493387 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
LSM2-214ENST00000493387 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
LSM2-214ENST00000493387 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
LSM2-214ENST00000493387 STARD3NLO95772 234 aa14.92□□□□□ -0.02
LSM2-214ENST00000493387 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
LSM2-214ENST00000493387 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
LSM2-214ENST00000493387 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
LSM2-214ENST00000493387 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
LSM2-214ENST00000493387 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
LSM2-214ENST00000493387 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
LSM2-214ENST00000493387 TWISTNBQ3B726 338 aaPredicted RBP14.9□□□□□ -0.02
LSM2-214ENST00000493387 C8orf58Q8NAV2 365 aa14.9□□□□□ -0.02
LSM2-214ENST00000493387 ZNF428Q96B54 188 aa14.9□□□□□ -0.02
LSM2-214ENST00000493387 CAMKK2Q96RR4 588 aa14.9□□□□□ -0.02
LSM2-214ENST00000493387 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
LSM2-214ENST00000493387 TNS1Q9HBL0 1735 aaKnown RBP14.89□□□□□ -0.03
LSM2-214ENST00000493387 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
LSM2-214ENST00000493387 SLC4A9Q96Q91 983 aa14.89□□□□□ -0.03
LSM2-214ENST00000493387 ZNF831Q5JPB2 1677 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
LSM2-214ENST00000493387 VAMP4O75379 141 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 KRT24Q2M2I5 525 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 CCDC30Q5VVM6 783 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 DNAJC10Q8IXB1 793 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 TSPYL6Q8N831 410 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
LSM2-214ENST00000493387 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
LSM2-214ENST00000493387 LY75O60449 1722 aa14.87□□□□□ -0.03
LSM2-214ENST00000493387 CYP19A1P11511 503 aaPredicted RBP14.87□□□□□ -0.03
LSM2-214ENST00000493387 ITPK1Q13572 414 aa14.87□□□□□ -0.03
LSM2-214ENST00000493387 RC3H1Q5TC82 1133 aaKnown RBP14.87□□□□□ -0.03
LSM2-214ENST00000493387 PROM2Q8N271 834 aa14.87□□□□□ -0.03
LSM2-214ENST00000493387 USP16Q9Y5T5 823 aa14.87□□□□□ -0.03
LSM2-214ENST00000493387 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms