RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 STK31Q9BXU1 1019 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 SLC52A2Q9HAB3 445 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 GLI3P10071 1580 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 BRWD3Q6RI45 1802 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 RGPD5Q99666 1765 aa6.85□□□□□ -1.31
NEK4-205ENST00000493199 HOXB7P09629 217 aa6.84□□□□□ -1.31
NEK4-205ENST00000493199 CANXP27824 592 aaKnown RBP6.84□□□□□ -1.31
NEK4-205ENST00000493199 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
NEK4-205ENST00000493199 FMNL2Q96PY5 1086 aa6.84□□□□□ -1.31
NEK4-205ENST00000493199 CHL1O00533 1208 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 STARD3NLO95772 234 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 CCDC30Q5VVM6 783 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 PPP4R3CPQ6ZMV5 832 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 MCM10Q7L590 875 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 TRIM35Q9UPQ4 493 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 HDAC5Q9UQL6 1122 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 RGPD1P0DJD0 1748 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 TNS2Q63HR2 1409 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 LRP5O75197 1615 aa6.83□□□□□ -1.32
NEK4-205ENST00000493199 CYP27B1O15528 508 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 DDX58O95786 925 aaKnown RBP6.82□□□□□ -1.32
NEK4-205ENST00000493199 SNRPA1P09661 255 aaKnown RBP6.82□□□□□ -1.32
NEK4-205ENST00000493199 TWISTNBQ3B726 338 aaPredicted RBP6.82□□□□□ -1.32
NEK4-205ENST00000493199 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 ZNF790Q6PG37 636 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 DEFB132Q7Z7B7 95 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 VSIG10Q8N0Z9 540 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 IL17REQ8NFR9 667 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 CEMIPQ8WUJ3 1361 aa6.82□□□□□ -1.32
NEK4-205ENST00000493199 KIF16BQ96L93 1317 aa6.81□□□□□ -1.32
NEK4-205ENST00000493199 C1QBPQ07021 282 aaKnown RBP6.81□□□□□ -1.32
NEK4-205ENST00000493199 BCL11BQ9C0K0 894 aaPredicted RBP6.81□□□□□ -1.32
NEK4-205ENST00000493199 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
NEK4-205ENST00000493199 MEGF6O75095 1541 aa6.81□□□□□ -1.32
NEK4-205ENST00000493199 PRIM1P49642 420 aaKnown RBP6.8□□□□□ -1.32
NEK4-205ENST00000493199 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
NEK4-205ENST00000493199 NRAPQ86VF7 1730 aa6.8□□□□□ -1.32
NEK4-205ENST00000493199 CNKSR2Q8WXI2 1034 aa6.8□□□□□ -1.32
NEK4-205ENST00000493199 RBM42Q9BTD8 480 aaKnown RBP6.8□□□□□ -1.32
NEK4-205ENST00000493199 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
NEK4-205ENST00000493199 RNF216Q9NWF9 866 aaPredicted RBP6.8□□□□□ -1.32
NEK4-205ENST00000493199 DBF4Q9UBU7 674 aaPredicted RBP6.8□□□□□ -1.32
NEK4-205ENST00000493199 RCAN3Q9UKA8 241 aa6.8□□□□□ -1.32
NEK4-205ENST00000493199 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 ZNF521Q96K83 1311 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 BCL9O00512 1426 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 ZNF853P0CG23 659 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 BAG6P46379 1132 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 EXOSC9Q06265 439 aaKnown RBP6.79□□□□□ -1.32
NEK4-205ENST00000493199 AAMPQ13685 434 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 SLC27A3Q5K4L6 730 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 HDGFL1Q5TGJ6 251 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 DUSP27Q5VZP5 1158 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 MARCH10Q8NA82 808 aaPredicted RBP6.79□□□□□ -1.32
NEK4-205ENST00000493199 MBIPQ9NS73 344 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 SMC4Q9NTJ3 1288 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 HYPKQ9NX55 129 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 RGPD2P0DJD1 1756 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
NEK4-205ENST00000493199 FANCIQ9NVI1 1328 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 A0A087WZG4 1122 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 HSP90B1P14625 803 aaKnown RBP6.78□□□□□ -1.32
NEK4-205ENST00000493199 EIF2S2P20042 333 aaKnown RBP6.78□□□□□ -1.32
NEK4-205ENST00000493199 ATP6V1AP38606 617 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 NEXNQ0ZGT2 675 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 FTSJ3Q8IY81 847 aaKnown RBP6.78□□□□□ -1.32
NEK4-205ENST00000493199 TRMT2AQ8IZ69 625 aaKnown RBP6.78□□□□□ -1.32
NEK4-205ENST00000493199 FLAD1Q8NFF5 587 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
NEK4-205ENST00000493199 API5Q9BZZ5 524 aaKnown RBP6.78□□□□□ -1.32
NEK4-205ENST00000493199 PTPRCP08575 1304 aa6.77□□□□□ -1.32
NEK4-205ENST00000493199 ELL2O00472 640 aaPredicted RBP6.77□□□□□ -1.33
NEK4-205ENST00000493199 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
NEK4-205ENST00000493199 APBA3O96018 575 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 SLC4A2P04920 1241 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 EIF4A1P60842 406 aaKnown RBP6.77□□□□□ -1.33
NEK4-205ENST00000493199 NBPF14Q5TI25 921 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 ERICH6BQ5W0A0 696 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 PIGBQ92521 554 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 ARHGAP45Q92619 1136 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 TSR2Q969E8 191 aaKnown RBP6.77□□□□□ -1.33
NEK4-205ENST00000493199 CDCA7LQ96GN5 454 aa6.77□□□□□ -1.33
NEK4-205ENST00000493199 THUMPD2Q9BTF0 503 aaKnown RBP6.77□□□□□ -1.33
NEK4-205ENST00000493199 PLSCR1O15162 318 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 GIGYF1O75420 1035 aaPredicted RBP6.76□□□□□ -1.33
NEK4-205ENST00000493199 BRPF1P55201 1214 aaPredicted RBP6.76□□□□□ -1.33
NEK4-205ENST00000493199 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 ZKSCAN2Q63HK3 967 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 KIF6Q6ZMV9 814 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
NEK4-205ENST00000493199 ARXQ96QS3 562 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 MIS18AQ9NYP9 233 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 HEG1Q9ULI3 1381 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 DLG5Q8TDM6 1919 aa6.76□□□□□ -1.33
NEK4-205ENST00000493199 SCN11AQ9UI33 1791 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 PALLDQ8WX93 1383 aa6.75□□□□□ -1.33
NEK4-205ENST00000493199 SENP3-EIF4A1A0A087X0R7 540 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms