RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 MRC1P22897 1456 aa18.7■□□□□ 0.58
MMP11-213ENST00000493132 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
MMP11-213ENST00000493132 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
MMP11-213ENST00000493132 RALBP1Q15311 655 aa18.69■□□□□ 0.58
MMP11-213ENST00000493132 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
MMP11-213ENST00000493132 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
MMP11-213ENST00000493132 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
MMP11-213ENST00000493132 MSH5O43196 834 aa18.68■□□□□ 0.58
MMP11-213ENST00000493132 GAS2L2Q8NHY3 880 aa18.68■□□□□ 0.58
MMP11-213ENST00000493132 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
MMP11-213ENST00000493132 PNPLA7Q6ZV29 1317 aa18.68■□□□□ 0.58
MMP11-213ENST00000493132 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
MMP11-213ENST00000493132 ATP6V1AP38606 617 aa18.67■□□□□ 0.58
MMP11-213ENST00000493132 NFATC2IPQ8NCF5 419 aa18.67■□□□□ 0.58
MMP11-213ENST00000493132 AK7Q96M32 723 aa18.67■□□□□ 0.58
MMP11-213ENST00000493132 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
MMP11-213ENST00000493132 LINC00116Q8NCU8 138 aa18.66■□□□□ 0.58
MMP11-213ENST00000493132 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
MMP11-213ENST00000493132 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
MMP11-213ENST00000493132 TJP1Q07157 1748 aa18.66■□□□□ 0.58
MMP11-213ENST00000493132 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
MMP11-213ENST00000493132 DLG5Q8TDM6 1919 aa18.65■□□□□ 0.58
MMP11-213ENST00000493132 PTCD1O75127 700 aaKnown RBP18.65■□□□□ 0.58
MMP11-213ENST00000493132 ITPK1Q13572 414 aa18.65■□□□□ 0.58
MMP11-213ENST00000493132 PHACTR3Q96KR7 559 aa18.65■□□□□ 0.58
MMP11-213ENST00000493132 MTFR1LQ9H019 292 aa18.65■□□□□ 0.58
MMP11-213ENST00000493132 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
MMP11-213ENST00000493132 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
MMP11-213ENST00000493132 PHF14O94880 888 aa18.64■□□□□ 0.57
MMP11-213ENST00000493132 FCHSD2O94868 740 aa18.62■□□□□ 0.57
MMP11-213ENST00000493132 NEFMP07197 916 aa18.62■□□□□ 0.57
MMP11-213ENST00000493132 HMGB2P26583 209 aaKnown RBP18.62■□□□□ 0.57
MMP11-213ENST00000493132 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
MMP11-213ENST00000493132 GNPATO15228 680 aa18.61■□□□□ 0.57
MMP11-213ENST00000493132 TEFQ10587 303 aa18.61■□□□□ 0.57
MMP11-213ENST00000493132 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
MMP11-213ENST00000493132 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
MMP11-213ENST00000493132 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
MMP11-213ENST00000493132 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
MMP11-213ENST00000493132 KCPQ6ZWJ8 1503 aa18.6■□□□□ 0.57
MMP11-213ENST00000493132 PTGER2P43116 358 aa18.6■□□□□ 0.57
MMP11-213ENST00000493132 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
MMP11-213ENST00000493132 COL23A1Q86Y22 540 aaPredicted RBP18.6■□□□□ 0.57
MMP11-213ENST00000493132 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
MMP11-213ENST00000493132 AMIGO3Q86WK7 504 aa18.59■□□□□ 0.57
MMP11-213ENST00000493132 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
MMP11-213ENST00000493132 C4AP0C0L4 1744 aa18.58■□□□□ 0.57
MMP11-213ENST00000493132 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
MMP11-213ENST00000493132 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
MMP11-213ENST00000493132 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.56
MMP11-213ENST00000493132 PRKRIP1Q9H875 184 aaPredicted RBP18.58■□□□□ 0.56
MMP11-213ENST00000493132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
MMP11-213ENST00000493132 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
MMP11-213ENST00000493132 SLC16A10Q8TF71 515 aa18.57■□□□□ 0.56
MMP11-213ENST00000493132 POLD1P28340 1107 aa18.56■□□□□ 0.56
MMP11-213ENST00000493132 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
MMP11-213ENST00000493132 MCM10Q7L590 875 aa18.56■□□□□ 0.56
MMP11-213ENST00000493132 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
MMP11-213ENST00000493132 FLAD1Q8NFF5 587 aa18.56■□□□□ 0.56
MMP11-213ENST00000493132 CNTNAP4Q9C0A0 1308 aa18.55■□□□□ 0.56
MMP11-213ENST00000493132 SSFA2P28290 1259 aa18.55■□□□□ 0.56
MMP11-213ENST00000493132 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
MMP11-213ENST00000493132 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
MMP11-213ENST00000493132 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
MMP11-213ENST00000493132 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
MMP11-213ENST00000493132 ARXQ96QS3 562 aa18.54■□□□□ 0.56
MMP11-213ENST00000493132 SGIP1Q9BQI5 828 aa18.54■□□□□ 0.56
MMP11-213ENST00000493132 RTCBQ9Y3I0 505 aaKnown RBP18.54■□□□□ 0.56
MMP11-213ENST00000493132 CRKLP46109 303 aaKnown RBP18.53■□□□□ 0.56
MMP11-213ENST00000493132 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
MMP11-213ENST00000493132 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
MMP11-213ENST00000493132 FHDC1Q9C0D6 1143 aaPredicted RBP18.52■□□□□ 0.56
MMP11-213ENST00000493132 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
MMP11-213ENST00000493132 NFE2L2Q16236 605 aa18.51■□□□□ 0.55
MMP11-213ENST00000493132 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
MMP11-213ENST00000493132 RC3H1Q5TC82 1133 aaKnown RBP18.5■□□□□ 0.55
MMP11-213ENST00000493132 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
MMP11-213ENST00000493132 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
MMP11-213ENST00000493132 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
MMP11-213ENST00000493132 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
MMP11-213ENST00000493132 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
MMP11-213ENST00000493132 KCNQ3O43525 872 aa18.48■□□□□ 0.55
MMP11-213ENST00000493132 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
MMP11-213ENST00000493132 RPS6KA4O75676 772 aa18.48■□□□□ 0.55
MMP11-213ENST00000493132 TRAPPC3LQ5T215 181 aa18.48■□□□□ 0.55
MMP11-213ENST00000493132 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
MMP11-213ENST00000493132 RFC4P35249 363 aa18.47■□□□□ 0.55
MMP11-213ENST00000493132 FMNL2Q96PY5 1086 aa18.47■□□□□ 0.55
MMP11-213ENST00000493132 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
MMP11-213ENST00000493132 LAMB4A4D0S4 1761 aa18.46■□□□□ 0.55
MMP11-213ENST00000493132 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
MMP11-213ENST00000493132 ADRA2BP18089 450 aa18.46■□□□□ 0.55
MMP11-213ENST00000493132 INTS5Q6P9B9 1019 aaKnown RBP18.46■□□□□ 0.55
MMP11-213ENST00000493132 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
MMP11-213ENST00000493132 ANP32CO43423 234 aa18.45■□□□□ 0.54
MMP11-213ENST00000493132 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
MMP11-213ENST00000493132 SYT17Q9BSW7 474 aa18.45■□□□□ 0.54
MMP11-213ENST00000493132 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
MMP11-213ENST00000493132 COL15A1P39059 1388 aa18.44■□□□□ 0.54
MMP11-213ENST00000493132 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms