RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
CCM2-217ENST00000492883 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
CCM2-217ENST00000492883 HMGB2P26583 209 aaKnown RBP18.43■□□□□ 0.54
CCM2-217ENST00000492883 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
CCM2-217ENST00000492883 SIK1P57059 783 aa18.43■□□□□ 0.54
CCM2-217ENST00000492883 RIPK4P57078 832 aa18.43■□□□□ 0.54
CCM2-217ENST00000492883 DIEXFQ68CQ4 756 aaKnown RBP18.43■□□□□ 0.54
CCM2-217ENST00000492883 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
CCM2-217ENST00000492883 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
CCM2-217ENST00000492883 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
CCM2-217ENST00000492883 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
CCM2-217ENST00000492883 BTAF1O14981 1849 aa18.42■□□□□ 0.54
CCM2-217ENST00000492883 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
CCM2-217ENST00000492883 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
CCM2-217ENST00000492883 SLC15A2Q16348 729 aa18.41■□□□□ 0.54
CCM2-217ENST00000492883 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
CCM2-217ENST00000492883 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
CCM2-217ENST00000492883 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
CCM2-217ENST00000492883 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
CCM2-217ENST00000492883 KAT6BQ8WYB5 2073 aa18.39■□□□□ 0.53
CCM2-217ENST00000492883 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
CCM2-217ENST00000492883 APAF1O14727 1248 aa18.38■□□□□ 0.53
CCM2-217ENST00000492883 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
CCM2-217ENST00000492883 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
CCM2-217ENST00000492883 FAM9BQ8IZU0 186 aa18.37■□□□□ 0.53
CCM2-217ENST00000492883 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
CCM2-217ENST00000492883 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
CCM2-217ENST00000492883 RGPD3A6NKT7 1758 aaPredicted RBP18.36■□□□□ 0.53
CCM2-217ENST00000492883 ITPK1Q13572 414 aa18.36■□□□□ 0.53
CCM2-217ENST00000492883 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
CCM2-217ENST00000492883 RGPD4Q7Z3J3 1758 aa18.36■□□□□ 0.53
CCM2-217ENST00000492883 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
CCM2-217ENST00000492883 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
CCM2-217ENST00000492883 MRC1P22897 1456 aa18.35■□□□□ 0.53
CCM2-217ENST00000492883 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
CCM2-217ENST00000492883 AK7Q96M32 723 aa18.35■□□□□ 0.53
CCM2-217ENST00000492883 RREB1Q92766 1687 aa18.34■□□□□ 0.53
CCM2-217ENST00000492883 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
CCM2-217ENST00000492883 ITGB4P16144 1822 aa18.34■□□□□ 0.53
CCM2-217ENST00000492883 CCER2I3L3R5 266 aa18.33■□□□□ 0.52
CCM2-217ENST00000492883 KCNQ3O43525 872 aa18.33■□□□□ 0.52
CCM2-217ENST00000492883 NUP188Q5SRE5 1749 aa18.32■□□□□ 0.52
CCM2-217ENST00000492883 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
CCM2-217ENST00000492883 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
CCM2-217ENST00000492883 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
CCM2-217ENST00000492883 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
CCM2-217ENST00000492883 SENP3-EIF4A1A0A087X0R7 540 aa18.31■□□□□ 0.52
CCM2-217ENST00000492883 MSH5O43196 834 aa18.31■□□□□ 0.52
CCM2-217ENST00000492883 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
CCM2-217ENST00000492883 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
CCM2-217ENST00000492883 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
CCM2-217ENST00000492883 GNPATO15228 680 aa18.3■□□□□ 0.52
CCM2-217ENST00000492883 MIER1Q8N108 512 aa18.3■□□□□ 0.52
CCM2-217ENST00000492883 PDGFDQ9GZP0 370 aaPredicted RBP18.3■□□□□ 0.52
CCM2-217ENST00000492883 LY75O60449 1722 aa18.29■□□□□ 0.52
CCM2-217ENST00000492883 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
CCM2-217ENST00000492883 TEX13AQ9BXU3 409 aaPredicted RBP18.29■□□□□ 0.52
CCM2-217ENST00000492883 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
CCM2-217ENST00000492883 LAS1LQ9Y4W2 734 aaKnown RBP18.29■□□□□ 0.52
CCM2-217ENST00000492883 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
CCM2-217ENST00000492883 PHF14O94880 888 aa18.28■□□□□ 0.52
CCM2-217ENST00000492883 STARD3NLO95772 234 aa18.28■□□□□ 0.52
CCM2-217ENST00000492883 FLAD1Q8NFF5 587 aa18.28■□□□□ 0.52
CCM2-217ENST00000492883 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
CCM2-217ENST00000492883 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
CCM2-217ENST00000492883 ZBTB7AO95365 584 aa18.27■□□□□ 0.52
CCM2-217ENST00000492883 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
CCM2-217ENST00000492883 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
CCM2-217ENST00000492883 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
CCM2-217ENST00000492883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
CCM2-217ENST00000492883 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
CCM2-217ENST00000492883 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
CCM2-217ENST00000492883 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
CCM2-217ENST00000492883 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
CCM2-217ENST00000492883 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
CCM2-217ENST00000492883 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
CCM2-217ENST00000492883 PAPPAQ13219 1627 aa18.26■□□□□ 0.51
CCM2-217ENST00000492883 RPS6KA4O75676 772 aa18.25■□□□□ 0.51
CCM2-217ENST00000492883 SSFA2P28290 1259 aa18.25■□□□□ 0.51
CCM2-217ENST00000492883 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
CCM2-217ENST00000492883 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
CCM2-217ENST00000492883 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
CCM2-217ENST00000492883 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
CCM2-217ENST00000492883 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
CCM2-217ENST00000492883 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
CCM2-217ENST00000492883 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
CCM2-217ENST00000492883 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
CCM2-217ENST00000492883 SPON1Q9HCB6 807 aa18.24■□□□□ 0.51
CCM2-217ENST00000492883 CHL1O00533 1208 aa18.23■□□□□ 0.51
CCM2-217ENST00000492883 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
CCM2-217ENST00000492883 CFAP44Q96MT7 982 aa18.23■□□□□ 0.51
CCM2-217ENST00000492883 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
CCM2-217ENST00000492883 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
CCM2-217ENST00000492883 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
CCM2-217ENST00000492883 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
CCM2-217ENST00000492883 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
CCM2-217ENST00000492883 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
CCM2-217ENST00000492883 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
CCM2-217ENST00000492883 ADRA2BP18089 450 aa18.21■□□□□ 0.51
CCM2-217ENST00000492883 RFC4P35249 363 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms