RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 TSHZ3Q63HK5 1081 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 FAM43AQ8N2R8 423 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 SNX21Q969T3 373 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
PRAME-213ENST00000492657 RGPD2P0DJD1 1756 aa15.91■□□□□ 0.14
PRAME-213ENST00000492657 PNMA6EA0A0J9YXQ4 647 aa15.91■□□□□ 0.14
PRAME-213ENST00000492657 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
PRAME-213ENST00000492657 NFAT5O94916 1531 aa15.91■□□□□ 0.14
PRAME-213ENST00000492657 USP54Q70EL1 1684 aa15.91■□□□□ 0.14
PRAME-213ENST00000492657 HMMRO75330 724 aa15.9■□□□□ 0.14
PRAME-213ENST00000492657 PANK2Q9BZ23 570 aa15.9■□□□□ 0.14
PRAME-213ENST00000492657 GCP02774 474 aa15.9■□□□□ 0.14
PRAME-213ENST00000492657 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
PRAME-213ENST00000492657 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
PRAME-213ENST00000492657 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
PRAME-213ENST00000492657 ANXA1P04083 346 aa15.89■□□□□ 0.13
PRAME-213ENST00000492657 NPHP4O75161 1426 aaPredicted RBP15.89■□□□□ 0.13
PRAME-213ENST00000492657 MCM4P33991 863 aa15.89■□□□□ 0.13
PRAME-213ENST00000492657 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
PRAME-213ENST00000492657 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
PRAME-213ENST00000492657 USP44Q9H0E7 712 aa15.88■□□□□ 0.13
PRAME-213ENST00000492657 FAM208AQ9UK61 1670 aaKnown RBP15.88■□□□□ 0.13
PRAME-213ENST00000492657 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
PRAME-213ENST00000492657 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
PRAME-213ENST00000492657 DDIT3P35638 169 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 GNAI3P08754 354 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 PDE1AP54750 535 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 PROSER2Q86WR7 435 aaPredicted RBP15.87■□□□□ 0.13
PRAME-213ENST00000492657 BABAM1Q9NWV8 329 aa15.87■□□□□ 0.13
PRAME-213ENST00000492657 ZNF142P52746 1687 aaPredicted RBP15.87■□□□□ 0.13
PRAME-213ENST00000492657 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
PRAME-213ENST00000492657 NCOA3Q9Y6Q9 1424 aa15.86■□□□□ 0.13
PRAME-213ENST00000492657 CHPF2Q9P2E5 772 aa15.86■□□□□ 0.13
PRAME-213ENST00000492657 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
PRAME-213ENST00000492657 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
PRAME-213ENST00000492657 TEFQ10587 303 aa15.85■□□□□ 0.13
PRAME-213ENST00000492657 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
PRAME-213ENST00000492657 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
PRAME-213ENST00000492657 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
PRAME-213ENST00000492657 K7ELQ4 463 aaPredicted RBP15.84■□□□□ 0.13
PRAME-213ENST00000492657 PLEKHO1Q53GL0 409 aaPredicted RBP15.84■□□□□ 0.13
PRAME-213ENST00000492657 DDX17Q92841 729 aaKnown RBP15.84■□□□□ 0.13
PRAME-213ENST00000492657 HSP90AA1P07900 732 aaKnown RBP15.84■□□□□ 0.13
PRAME-213ENST00000492657 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
PRAME-213ENST00000492657 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.13
PRAME-213ENST00000492657 ZC3H6P61129 1189 aaKnown RBP15.83■□□□□ 0.13
PRAME-213ENST00000492657 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.13
PRAME-213ENST00000492657 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
PRAME-213ENST00000492657 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
PRAME-213ENST00000492657 PXDNQ92626 1479 aa15.83■□□□□ 0.12
PRAME-213ENST00000492657 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
PRAME-213ENST00000492657 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
PRAME-213ENST00000492657 SOS1Q07889 1333 aaPredicted RBP15.82■□□□□ 0.12
PRAME-213ENST00000492657 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
PRAME-213ENST00000492657 TNPO1Q92973 898 aaKnown RBP15.82■□□□□ 0.12
PRAME-213ENST00000492657 OSBPL3Q9H4L5 887 aa15.82■□□□□ 0.12
PRAME-213ENST00000492657 NBPF7P0C2Y1 421 aaPredicted RBP15.81■□□□□ 0.12
PRAME-213ENST00000492657 SALL3Q9BXA9 1300 aa15.81■□□□□ 0.12
PRAME-213ENST00000492657 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
PRAME-213ENST00000492657 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
PRAME-213ENST00000492657 IBTKQ9P2D0 1353 aaPredicted RBP15.81■□□□□ 0.12
PRAME-213ENST00000492657 XRCC6P12956 609 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRAME-213ENST00000492657 C1orf141Q5JVX7 400 aa15.81■□□□□ 0.12
PRAME-213ENST00000492657 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
PRAME-213ENST00000492657 MX1P20591 662 aa15.8■□□□□ 0.12
PRAME-213ENST00000492657 PROSER3Q2NL68 480 aa15.8■□□□□ 0.12
PRAME-213ENST00000492657 CASC1Q6TDU7 716 aa15.8■□□□□ 0.12
PRAME-213ENST00000492657 TRAK2O60296 914 aa15.8■□□□□ 0.12
PRAME-213ENST00000492657 RABEP1Q15276 862 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 DNAAF4Q8WXU2 420 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 PKNOX2Q96KN3 472 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 ERC2O15083 957 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 AMOTQ4VCS5 1084 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 RILPL2Q969X0 211 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
PRAME-213ENST00000492657 AK9Q5TCS8 1911 aa15.79■□□□□ 0.12
PRAME-213ENST00000492657 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
PRAME-213ENST00000492657 L1TD1Q5T7N2 865 aaKnown RBP15.78■□□□□ 0.12
PRAME-213ENST00000492657 SSH3Q8TE77 659 aa15.78■□□□□ 0.12
PRAME-213ENST00000492657 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
PRAME-213ENST00000492657 RAB3GAP1Q15042 981 aa15.78■□□□□ 0.12
PRAME-213ENST00000492657 SSFA2P28290 1259 aa15.77■□□□□ 0.12
PRAME-213ENST00000492657 C19orf44Q9H6X5 657 aa15.77■□□□□ 0.12
PRAME-213ENST00000492657 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.12
PRAME-213ENST00000492657 SRGAP3O43295 1099 aa15.77■□□□□ 0.11
PRAME-213ENST00000492657 KDM3BQ7LBC6 1761 aa15.77■□□□□ 0.11
PRAME-213ENST00000492657 RGPD5Q99666 1765 aa15.77■□□□□ 0.11
PRAME-213ENST00000492657 SLIT3O75094 1523 aa15.77■□□□□ 0.11
PRAME-213ENST00000492657 ADCY9O60503 1353 aa15.77■□□□□ 0.11
PRAME-213ENST00000492657 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
PRAME-213ENST00000492657 REC8O95072 547 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms