RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
MDC1-207ENST00000492462 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
MDC1-207ENST00000492462 SIK1P57059 783 aa15.93■□□□□ 0.14
MDC1-207ENST00000492462 ITPK1Q13572 414 aa15.93■□□□□ 0.14
MDC1-207ENST00000492462 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
MDC1-207ENST00000492462 COL24A1Q17RW2 1714 aa15.93■□□□□ 0.14
MDC1-207ENST00000492462 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
MDC1-207ENST00000492462 CAPN15O75808 1086 aa15.92■□□□□ 0.14
MDC1-207ENST00000492462 SLC34A2O95436 690 aa15.92■□□□□ 0.14
MDC1-207ENST00000492462 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
MDC1-207ENST00000492462 C1orf141Q5JVX7 400 aa15.92■□□□□ 0.14
MDC1-207ENST00000492462 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
MDC1-207ENST00000492462 UBR3Q6ZT12 1888 aa15.91■□□□□ 0.14
MDC1-207ENST00000492462 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
MDC1-207ENST00000492462 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
MDC1-207ENST00000492462 CABP4P57796 275 aa15.91■□□□□ 0.14
MDC1-207ENST00000492462 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
MDC1-207ENST00000492462 MSH5O43196 834 aa15.9■□□□□ 0.14
MDC1-207ENST00000492462 HSPA6P17066 643 aa15.9■□□□□ 0.14
MDC1-207ENST00000492462 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
MDC1-207ENST00000492462 SLC16A10Q8TF71 515 aa15.9■□□□□ 0.14
MDC1-207ENST00000492462 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
MDC1-207ENST00000492462 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
MDC1-207ENST00000492462 NFATC2IPQ8NCF5 419 aa15.89■□□□□ 0.13
MDC1-207ENST00000492462 ARXQ96QS3 562 aa15.89■□□□□ 0.13
MDC1-207ENST00000492462 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
MDC1-207ENST00000492462 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
MDC1-207ENST00000492462 AK7Q96M32 723 aa15.88■□□□□ 0.13
MDC1-207ENST00000492462 RBM42Q9BTD8 480 aaKnown RBP15.87■□□□□ 0.13
MDC1-207ENST00000492462 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
MDC1-207ENST00000492462 PHF14O94880 888 aa15.86■□□□□ 0.13
MDC1-207ENST00000492462 GPR162Q16538 588 aa15.86■□□□□ 0.13
MDC1-207ENST00000492462 ADAMTS7Q9UKP4 1686 aa15.86■□□□□ 0.13
MDC1-207ENST00000492462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
MDC1-207ENST00000492462 RNMTO43148 476 aaKnown RBP15.85■□□□□ 0.13
MDC1-207ENST00000492462 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
MDC1-207ENST00000492462 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
MDC1-207ENST00000492462 MYH14Q7Z406 1995 aaKnown RBP15.85■□□□□ 0.13
MDC1-207ENST00000492462 ZNF831Q5JPB2 1677 aa15.85■□□□□ 0.13
MDC1-207ENST00000492462 GNPATO15228 680 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 POLD1P28340 1107 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 MRC1P22897 1456 aa15.84■□□□□ 0.13
MDC1-207ENST00000492462 TJP1Q07157 1748 aa15.83■□□□□ 0.13
MDC1-207ENST00000492462 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
MDC1-207ENST00000492462 FLAD1Q8NFF5 587 aa15.83■□□□□ 0.12
MDC1-207ENST00000492462 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
MDC1-207ENST00000492462 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
MDC1-207ENST00000492462 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
MDC1-207ENST00000492462 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
MDC1-207ENST00000492462 SSFA2P28290 1259 aa15.81■□□□□ 0.12
MDC1-207ENST00000492462 PRELPP51888 382 aa15.81■□□□□ 0.12
MDC1-207ENST00000492462 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
MDC1-207ENST00000492462 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
MDC1-207ENST00000492462 MAP3K5Q99683 1374 aa15.81■□□□□ 0.12
MDC1-207ENST00000492462 COL13A1Q5TAT6 717 aaPredicted RBP15.8■□□□□ 0.12
MDC1-207ENST00000492462 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
MDC1-207ENST00000492462 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
MDC1-207ENST00000492462 CNTNAP4Q9C0A0 1308 aa15.79■□□□□ 0.12
MDC1-207ENST00000492462 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
MDC1-207ENST00000492462 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
MDC1-207ENST00000492462 SIPA1L3O60292 1781 aaPredicted RBP15.79■□□□□ 0.12
MDC1-207ENST00000492462 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
MDC1-207ENST00000492462 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
MDC1-207ENST00000492462 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
MDC1-207ENST00000492462 RC3H1Q5TC82 1133 aaKnown RBP15.78■□□□□ 0.12
MDC1-207ENST00000492462 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
MDC1-207ENST00000492462 RTCBQ9Y3I0 505 aaKnown RBP15.78■□□□□ 0.12
MDC1-207ENST00000492462 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.12
MDC1-207ENST00000492462 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
MDC1-207ENST00000492462 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
MDC1-207ENST00000492462 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
MDC1-207ENST00000492462 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
MDC1-207ENST00000492462 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
MDC1-207ENST00000492462 FCHSD2O94868 740 aa15.75■□□□□ 0.11
MDC1-207ENST00000492462 INTS5Q6P9B9 1019 aaKnown RBP15.75■□□□□ 0.11
MDC1-207ENST00000492462 ATP10DQ9P241 1426 aa15.75■□□□□ 0.11
MDC1-207ENST00000492462 TEFQ10587 303 aa15.74■□□□□ 0.11
MDC1-207ENST00000492462 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
MDC1-207ENST00000492462 TNS4Q8IZW8 715 aa15.74■□□□□ 0.11
MDC1-207ENST00000492462 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
MDC1-207ENST00000492462 PCDH10Q9P2E7 1040 aa15.74■□□□□ 0.11
MDC1-207ENST00000492462 CEMIPQ8WUJ3 1361 aa15.74■□□□□ 0.11
MDC1-207ENST00000492462 KCNQ3O43525 872 aa15.73■□□□□ 0.11
MDC1-207ENST00000492462 SRP68Q9UHB9 627 aaKnown RBP15.73■□□□□ 0.11
MDC1-207ENST00000492462 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 MMP10P09238 476 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
MDC1-207ENST00000492462 ADRA2BP18089 450 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 MCM10Q7L590 875 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
MDC1-207ENST00000492462 CCDC87Q9NVE4 849 aa15.72■□□□□ 0.11
MDC1-207ENST00000492462 GYS1P13807 737 aa15.71■□□□□ 0.11
MDC1-207ENST00000492462 RFC4P35249 363 aa15.71■□□□□ 0.11
MDC1-207ENST00000492462 RALBP1Q15311 655 aa15.71■□□□□ 0.11
MDC1-207ENST00000492462 ZNF790Q6PG37 636 aa15.71■□□□□ 0.11
MDC1-207ENST00000492462 DNAJC5GQ8N7S2 189 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms