RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GOLGA6L22H0YM25 854 aa19.83■□□□□ 0.76
SEMA4D-220ENST00000492386 FLIIQ13045 1269 aa19.83■□□□□ 0.76
SEMA4D-220ENST00000492386 USP54Q70EL1 1684 aa19.82■□□□□ 0.76
SEMA4D-220ENST00000492386 NUCB2P80303 420 aa19.82■□□□□ 0.76
SEMA4D-220ENST00000492386 EXOC6BQ9Y2D4 811 aa19.82■□□□□ 0.76
SEMA4D-220ENST00000492386 GNAT3A8MTJ3 354 aa19.81■□□□□ 0.76
SEMA4D-220ENST00000492386 ST18O60284 1047 aa19.81■□□□□ 0.76
SEMA4D-220ENST00000492386 CCDC30Q5VVM6 783 aa19.81■□□□□ 0.76
SEMA4D-220ENST00000492386 HOXC9P31274 260 aa19.8■□□□□ 0.76
SEMA4D-220ENST00000492386 NLRP6P59044 892 aa19.8■□□□□ 0.76
SEMA4D-220ENST00000492386 KLHL40Q2TBA0 621 aa19.8■□□□□ 0.76
SEMA4D-220ENST00000492386 FKBP5Q13451 457 aaPredicted RBP19.8■□□□□ 0.76
SEMA4D-220ENST00000492386 ANKARQ7Z5J8 1434 aa19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 GNAI3P08754 354 aa19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 PKP1Q13835 747 aa19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 CWC22Q9HCG8 908 aaKnown RBP19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 PNMA6EA0A0J9YXQ4 647 aa19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 IL17REQ8NFR9 667 aa19.79■□□□□ 0.76
SEMA4D-220ENST00000492386 ATP8B2P98198 1209 aa19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 TSHZ3Q63HK5 1081 aa19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 MAP3K5Q99683 1374 aa19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 IBTKQ9P2D0 1353 aaPredicted RBP19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 ZGPATQ8N5A5 531 aaKnown RBP19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 DDX49Q9Y6V7 483 aaKnown RBP19.78■□□□□ 0.76
SEMA4D-220ENST00000492386 SOS1Q07889 1333 aaPredicted RBP19.77■□□□□ 0.76
SEMA4D-220ENST00000492386 NECTIN2Q92692 538 aa19.77■□□□□ 0.76
SEMA4D-220ENST00000492386 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
SEMA4D-220ENST00000492386 CLCN1P35523 988 aa19.77■□□□□ 0.75
SEMA4D-220ENST00000492386 MX1P20591 662 aa19.76■□□□□ 0.75
SEMA4D-220ENST00000492386 NUTM2GQ5VZR2 741 aa19.76■□□□□ 0.75
SEMA4D-220ENST00000492386 MCTP1Q6DN14 999 aa19.76■□□□□ 0.75
SEMA4D-220ENST00000492386 ESYT1Q9BSJ8 1104 aa19.76■□□□□ 0.75
SEMA4D-220ENST00000492386 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
SEMA4D-220ENST00000492386 TAF7Q15545 349 aaPredicted RBP19.75■□□□□ 0.75
SEMA4D-220ENST00000492386 LMBRD1Q9NUN5 540 aa19.75■□□□□ 0.75
SEMA4D-220ENST00000492386 ZDHHC9Q9Y397 364 aa19.75■□□□□ 0.75
SEMA4D-220ENST00000492386 LRRFIP2Q9Y608 721 aaKnown RBP19.75■□□□□ 0.75
SEMA4D-220ENST00000492386 STAP2Q9UGK3 403 aa19.74■□□□□ 0.75
SEMA4D-220ENST00000492386 USP44Q9H0E7 712 aa19.73■□□□□ 0.75
SEMA4D-220ENST00000492386 FER1L4A9Z1Z3 1794 aa19.73■□□□□ 0.75
SEMA4D-220ENST00000492386 LTN1O94822 1766 aa19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 THEMISQ8N1K5 641 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 KCNA6P17658 529 aa19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 CHMLP26374 656 aa19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 ERBB4Q15303 1308 aa19.72■□□□□ 0.75
SEMA4D-220ENST00000492386 NEK4P51957 841 aa19.71■□□□□ 0.75
SEMA4D-220ENST00000492386 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
SEMA4D-220ENST00000492386 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
SEMA4D-220ENST00000492386 ESPNB1AK53 854 aa19.7■□□□□ 0.74
SEMA4D-220ENST00000492386 ZNF445P59923 1031 aa19.7■□□□□ 0.74
SEMA4D-220ENST00000492386 SRCIN1Q9C0H9 1055 aa19.7■□□□□ 0.74
SEMA4D-220ENST00000492386 TMX3Q96JJ7 454 aa19.7■□□□□ 0.74
SEMA4D-220ENST00000492386 PALD1Q9ULE6 856 aa19.7■□□□□ 0.74
SEMA4D-220ENST00000492386 MED1Q15648 1581 aaPredicted RBP19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 HDGFL1Q5TGJ6 251 aa19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 UNC5CLQ8IV45 518 aa19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 USHBP1Q8N6Y0 703 aa19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 SSH3Q8TE77 659 aa19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 RILPL2Q969X0 211 aa19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 PHAXQ9H814 394 aaKnown RBP19.69■□□□□ 0.74
SEMA4D-220ENST00000492386 CEMIPQ8WUJ3 1361 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 AOX1Q06278 1338 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 NASPP49321 788 aaPredicted RBP19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 ANAPC15P60006 121 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 CAVIN1Q6NZI2 390 aaKnown RBP19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 IL17RAQ96F46 866 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 MCM2P49736 904 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 ZSCAN23Q3MJ62 389 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 PPP1R9BQ96SB3 815 aa19.68■□□□□ 0.74
SEMA4D-220ENST00000492386 KDM3BQ7LBC6 1761 aa19.67■□□□□ 0.74
SEMA4D-220ENST00000492386 MCCP23508 829 aa19.67■□□□□ 0.74
SEMA4D-220ENST00000492386 ANO2Q9NQ90 1003 aa19.67■□□□□ 0.74
SEMA4D-220ENST00000492386 PRPF40AO75400 957 aaKnown RBP19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 CUL4AQ13619 759 aa19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 TRIM44Q96DX7 344 aaPredicted RBP19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 NCLP19338 710 aaKnown RBP19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 CCDC173Q0VFZ6 552 aa19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 POLA2Q14181 598 aa19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 GPT2Q8TD30 523 aa19.66■□□□□ 0.74
SEMA4D-220ENST00000492386 IL1RAPL2Q9NP60 686 aa19.65■□□□□ 0.74
SEMA4D-220ENST00000492386 NFAT5O94916 1531 aa19.65■□□□□ 0.74
SEMA4D-220ENST00000492386 CHAMP1Q96JM3 812 aa19.65■□□□□ 0.74
SEMA4D-220ENST00000492386 PPP1R42Q7Z4L9 355 aa19.64■□□□□ 0.74
SEMA4D-220ENST00000492386 IL25Q9H293 177 aa19.64■□□□□ 0.73
SEMA4D-220ENST00000492386 RAB11FIP3O75154 756 aa19.63■□□□□ 0.73
SEMA4D-220ENST00000492386 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
SEMA4D-220ENST00000492386 IP6K1Q92551 441 aa19.63■□□□□ 0.73
SEMA4D-220ENST00000492386 NUTM1Q86Y26 1132 aa19.63■□□□□ 0.73
SEMA4D-220ENST00000492386 SETD1BQ9UPS6 1966 aaKnown RBP19.63■□□□□ 0.73
SEMA4D-220ENST00000492386 RGPD2P0DJD1 1756 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 BRD1O95696 1058 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 INTS4Q96HW7 963 aaKnown RBP19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 LGR6Q9HBX8 967 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms