RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
MCF2L2-213ENST00000492331 PHF14O94880 888 aa13.06□□□□□ -0.32
MCF2L2-213ENST00000492331 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
MCF2L2-213ENST00000492331 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
MCF2L2-213ENST00000492331 SGIP1Q9BQI5 828 aa13.06□□□□□ -0.32
MCF2L2-213ENST00000492331 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 ITPK1Q13572 414 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 SYT17Q9BSW7 474 aa13.05□□□□□ -0.32
MCF2L2-213ENST00000492331 GNPATO15228 680 aa13.04□□□□□ -0.32
MCF2L2-213ENST00000492331 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
MCF2L2-213ENST00000492331 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
MCF2L2-213ENST00000492331 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
MCF2L2-213ENST00000492331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
MCF2L2-213ENST00000492331 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
MCF2L2-213ENST00000492331 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
MCF2L2-213ENST00000492331 SCN11AQ9UI33 1791 aa13.02□□□□□ -0.33
MCF2L2-213ENST00000492331 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 SSFA2P28290 1259 aa13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
MCF2L2-213ENST00000492331 PRKAR2BP31323 418 aa13□□□□□ -0.33
MCF2L2-213ENST00000492331 DDX10Q13206 875 aaKnown RBP13□□□□□ -0.33
MCF2L2-213ENST00000492331 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
MCF2L2-213ENST00000492331 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
MCF2L2-213ENST00000492331 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
MCF2L2-213ENST00000492331 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
MCF2L2-213ENST00000492331 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
MCF2L2-213ENST00000492331 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
MCF2L2-213ENST00000492331 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
MCF2L2-213ENST00000492331 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
MCF2L2-213ENST00000492331 TEFQ10587 303 aa12.98□□□□□ -0.33
MCF2L2-213ENST00000492331 GPR162Q16538 588 aa12.98□□□□□ -0.33
MCF2L2-213ENST00000492331 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
MCF2L2-213ENST00000492331 PHACTR3Q96KR7 559 aa12.98□□□□□ -0.33
MCF2L2-213ENST00000492331 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
MCF2L2-213ENST00000492331 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
MCF2L2-213ENST00000492331 YY1P25490 414 aa12.97□□□□□ -0.33
MCF2L2-213ENST00000492331 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
MCF2L2-213ENST00000492331 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 RFC4P35249 363 aa12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
MCF2L2-213ENST00000492331 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
MCF2L2-213ENST00000492331 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
MCF2L2-213ENST00000492331 FCHSD2O94868 740 aa12.95□□□□□ -0.34
MCF2L2-213ENST00000492331 NEFMP07197 916 aa12.95□□□□□ -0.34
MCF2L2-213ENST00000492331 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
MCF2L2-213ENST00000492331 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
MCF2L2-213ENST00000492331 COL5A3P25940 1745 aaPredicted RBP12.94□□□□□ -0.34
MCF2L2-213ENST00000492331 ADRA2BP18089 450 aa12.94□□□□□ -0.34
MCF2L2-213ENST00000492331 MRC1P22897 1456 aa12.93□□□□□ -0.34
MCF2L2-213ENST00000492331 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
MCF2L2-213ENST00000492331 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
MCF2L2-213ENST00000492331 MMP10P09238 476 aa12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 TJP1Q07157 1748 aa12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 RALBP1Q15311 655 aa12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 CD2APQ9Y5K6 639 aa12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 ADAMTS7Q9UKP4 1686 aa12.92□□□□□ -0.34
MCF2L2-213ENST00000492331 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 INTS5Q6P9B9 1019 aaKnown RBP12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 MCM10Q7L590 875 aa12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
MCF2L2-213ENST00000492331 ZPR1O75312 459 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 STARD3NLO95772 234 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 GYS1P13807 737 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 PNNQ9H307 717 aaKnown RBP12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
MCF2L2-213ENST00000492331 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
MCF2L2-213ENST00000492331 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
MCF2L2-213ENST00000492331 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
MCF2L2-213ENST00000492331 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 KCNQ3O43525 872 aa12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 CEMIPQ8WUJ3 1361 aa12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
MCF2L2-213ENST00000492331 SIPA1L3O60292 1781 aaPredicted RBP12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
MCF2L2-213ENST00000492331 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms