RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, humanhuman

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-210ENST00000492314 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
PBX3-210ENST00000492314 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
PBX3-210ENST00000492314 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
PBX3-210ENST00000492314 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
PBX3-210ENST00000492314 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
PBX3-210ENST00000492314 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
PBX3-210ENST00000492314 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
PBX3-210ENST00000492314 SSFA2P28290 1259 aa12.88□□□□□ -0.35
PBX3-210ENST00000492314 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
PBX3-210ENST00000492314 FLT4P35916 1363 aa12.87□□□□□ -0.35
PBX3-210ENST00000492314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
PBX3-210ENST00000492314 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
PBX3-210ENST00000492314 PIGBQ92521 554 aa12.87□□□□□ -0.35
PBX3-210ENST00000492314 KIF13BQ9NQT8 1826 aa12.87□□□□□ -0.35
PBX3-210ENST00000492314 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
PBX3-210ENST00000492314 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
PBX3-210ENST00000492314 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
PBX3-210ENST00000492314 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
PBX3-210ENST00000492314 AK7Q96M32 723 aa12.86□□□□□ -0.35
PBX3-210ENST00000492314 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
PBX3-210ENST00000492314 SMIM5Q71RC9 77 aa12.85□□□□□ -0.35
PBX3-210ENST00000492314 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
PBX3-210ENST00000492314 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
PBX3-210ENST00000492314 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
PBX3-210ENST00000492314 SIK1P57059 783 aa12.84□□□□□ -0.35
PBX3-210ENST00000492314 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
PBX3-210ENST00000492314 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
PBX3-210ENST00000492314 PHF14O94880 888 aa12.83□□□□□ -0.36
PBX3-210ENST00000492314 APLP1P51693 650 aa12.83□□□□□ -0.36
PBX3-210ENST00000492314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
PBX3-210ENST00000492314 ITPK1Q13572 414 aa12.82□□□□□ -0.36
PBX3-210ENST00000492314 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
PBX3-210ENST00000492314 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
PBX3-210ENST00000492314 KDRP35968 1356 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 TOMM70O94826 608 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 TGFB2P61812 414 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
PBX3-210ENST00000492314 MMP10P09238 476 aa12.8□□□□□ -0.36
PBX3-210ENST00000492314 CARD14Q9BXL6 1004 aa12.8□□□□□ -0.36
PBX3-210ENST00000492314 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
PBX3-210ENST00000492314 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
PBX3-210ENST00000492314 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
PBX3-210ENST00000492314 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
PBX3-210ENST00000492314 GNPATO15228 680 aa12.79□□□□□ -0.36
PBX3-210ENST00000492314 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
PBX3-210ENST00000492314 PHKG2P15735 406 aa12.78□□□□□ -0.36
PBX3-210ENST00000492314 TMF1P82094 1093 aa12.78□□□□□ -0.36
PBX3-210ENST00000492314 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
PBX3-210ENST00000492314 EYA1Q99502 592 aa12.78□□□□□ -0.36
PBX3-210ENST00000492314 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
PBX3-210ENST00000492314 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
PBX3-210ENST00000492314 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
PBX3-210ENST00000492314 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
PBX3-210ENST00000492314 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
PBX3-210ENST00000492314 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 KCNA3P22001 575 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
PBX3-210ENST00000492314 NMRK2Q9NPI5 230 aa12.76□□□□□ -0.37
PBX3-210ENST00000492314 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
PBX3-210ENST00000492314 GYS1P13807 737 aa12.75□□□□□ -0.37
PBX3-210ENST00000492314 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
PBX3-210ENST00000492314 CNTNAP4Q9C0A0 1308 aa12.75□□□□□ -0.37
PBX3-210ENST00000492314 ARFGEF1Q9Y6D6 1849 aa12.75□□□□□ -0.37
PBX3-210ENST00000492314 DPEP1P16444 411 aa12.74□□□□□ -0.37
PBX3-210ENST00000492314 CDCA8Q53HL2 280 aa12.74□□□□□ -0.37
PBX3-210ENST00000492314 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
PBX3-210ENST00000492314 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
PBX3-210ENST00000492314 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
PBX3-210ENST00000492314 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
PBX3-210ENST00000492314 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
PBX3-210ENST00000492314 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
PBX3-210ENST00000492314 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
PBX3-210ENST00000492314 FSTL1Q12841 308 aa12.72□□□□□ -0.37
PBX3-210ENST00000492314 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
PBX3-210ENST00000492314 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
PBX3-210ENST00000492314 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
PBX3-210ENST00000492314 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
PBX3-210ENST00000492314 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
PBX3-210ENST00000492314 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
PBX3-210ENST00000492314 FCHSD2O94868 740 aa12.7□□□□□ -0.38
PBX3-210ENST00000492314 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
PBX3-210ENST00000492314 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
PBX3-210ENST00000492314 PPM1GO15355 546 aaPredicted RBP12.69□□□□□ -0.38
PBX3-210ENST00000492314 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
PBX3-210ENST00000492314 RFC4P35249 363 aa12.69□□□□□ -0.38
PBX3-210ENST00000492314 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
PBX3-210ENST00000492314 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
PBX3-210ENST00000492314 PIM2Q9P1W9 311 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms