RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 FHDC1Q9C0D6 1143 aaPredicted RBP36.5■■■■□ 3.43
SH3GL3-204ENST00000492099 C4BP0C0L5 1744 aa36.49■■■■□ 3.43
SH3GL3-204ENST00000492099 DCAF8L1A6NGE4 600 aa36.49■■■■□ 3.43
SH3GL3-204ENST00000492099 U2SURPO15042 1029 aaKnown RBP36.48■■■■□ 3.43
SH3GL3-204ENST00000492099 LINC00116Q8NCU8 138 aa36.47■■■■□ 3.43
SH3GL3-204ENST00000492099 SYT17Q9BSW7 474 aa36.47■■■■□ 3.43
SH3GL3-204ENST00000492099 ITPK1Q13572 414 aa36.45■■■■□ 3.43
SH3GL3-204ENST00000492099 NFATC2IPQ8NCF5 419 aa36.45■■■■□ 3.43
SH3GL3-204ENST00000492099 PPP2R1AP30153 589 aa36.44■■■■□ 3.42
SH3GL3-204ENST00000492099 RBM42Q9BTD8 480 aaKnown RBP36.44■■■■□ 3.42
SH3GL3-204ENST00000492099 MTHFSDQ2M296 383 aaKnown RBP36.43■■■■□ 3.42
SH3GL3-204ENST00000492099 COL24A1Q17RW2 1714 aa36.42■■■■□ 3.42
SH3GL3-204ENST00000492099 MAP3K5Q99683 1374 aa36.41■■■■□ 3.42
SH3GL3-204ENST00000492099 SSFA2P28290 1259 aa36.4■■■■□ 3.42
SH3GL3-204ENST00000492099 NUDCQ9Y266 331 aa36.4■■■■□ 3.42
SH3GL3-204ENST00000492099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP36.39■■■■□ 3.42
SH3GL3-204ENST00000492099 RNMTO43148 476 aaKnown RBP36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 PHF14O94880 888 aa36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 SLC4A9Q96Q91 983 aa36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 SLC52A2Q9HAB3 445 aa36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 LGR6Q9HBX8 967 aa36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 SCN11AQ9UI33 1791 aa36.38■■■■□ 3.41
SH3GL3-204ENST00000492099 GNPATO15228 680 aa36.37■■■■□ 3.41
SH3GL3-204ENST00000492099 AMIGO3Q86WK7 504 aa36.37■■■■□ 3.41
SH3GL3-204ENST00000492099 ZNF831Q5JPB2 1677 aa36.37■■■■□ 3.41
SH3GL3-204ENST00000492099 MSL1Q68DK7 614 aa36.35■■■■□ 3.41
SH3GL3-204ENST00000492099 UBR3Q6ZT12 1888 aa36.35■■■■□ 3.41
SH3GL3-204ENST00000492099 PTCD1O75127 700 aaKnown RBP36.34■■■■□ 3.41
SH3GL3-204ENST00000492099 GAS2L2Q8NHY3 880 aa36.34■■■■□ 3.41
SH3GL3-204ENST00000492099 RC3H1Q5TC82 1133 aaKnown RBP36.33■■■■□ 3.41
SH3GL3-204ENST00000492099 SMIM5Q71RC9 77 aa36.31■■■■□ 3.4
SH3GL3-204ENST00000492099 KLHL34Q8N239 644 aa36.31■■■■□ 3.4
SH3GL3-204ENST00000492099 RTCBQ9Y3I0 505 aaKnown RBP36.3■■■■□ 3.4
SH3GL3-204ENST00000492099 CNTNAP4Q9C0A0 1308 aa36.3■■■■□ 3.4
SH3GL3-204ENST00000492099 MRC1P22897 1456 aa36.3■■■■□ 3.4
SH3GL3-204ENST00000492099 U2AF1L5P0DN76 240 aaPredicted RBP36.28■■■■□ 3.4
SH3GL3-204ENST00000492099 U2AF1Q01081 240 aaKnown RBP eCLIP36.28■■■■□ 3.4
SH3GL3-204ENST00000492099 RSPH6AQ9H0K4 717 aa36.28■■■■□ 3.4
SH3GL3-204ENST00000492099 GNAT3A8MTJ3 354 aa36.27■■■■□ 3.4
SH3GL3-204ENST00000492099 PRKAR2BP31323 418 aa36.27■■■■□ 3.4
SH3GL3-204ENST00000492099 TRAPPC3LQ5T215 181 aa36.26■■■■□ 3.4
SH3GL3-204ENST00000492099 ADAMTS7Q9UKP4 1686 aa36.26■■■■□ 3.39
SH3GL3-204ENST00000492099 ADRA2BP18089 450 aa36.25■■■■□ 3.39
SH3GL3-204ENST00000492099 RPS6KA4O75676 772 aa36.24■■■■□ 3.39
SH3GL3-204ENST00000492099 FCHSD2O94868 740 aa36.24■■■■□ 3.39
SH3GL3-204ENST00000492099 COL5A3P25940 1745 aaPredicted RBP36.22■■■■□ 3.39
SH3GL3-204ENST00000492099 PHACTR3Q96KR7 559 aa36.22■■■■□ 3.39
SH3GL3-204ENST00000492099 SLC39A6Q13433 755 aa36.21■■■■□ 3.39
SH3GL3-204ENST00000492099 CRKLP46109 303 aaKnown RBP36.2■■■■□ 3.39
SH3GL3-204ENST00000492099 IL17REQ8NFR9 667 aa36.2■■■■□ 3.39
SH3GL3-204ENST00000492099 TEFQ10587 303 aa36.19■■■■□ 3.38
SH3GL3-204ENST00000492099 VIRMAQ69YN4 1812 aaKnown RBP36.18■■■■□ 3.38
SH3GL3-204ENST00000492099 ARHGEF1Q92888 912 aaKnown RBP36.18■■■■□ 3.38
SH3GL3-204ENST00000492099 CICQ96RK0 1608 aaPredicted RBP36.17■■■■□ 3.38
SH3GL3-204ENST00000492099 CD2APQ9Y5K6 639 aa36.17■■■■□ 3.38
SH3GL3-204ENST00000492099 YY1P25490 414 aa36.16■■■■□ 3.38
SH3GL3-204ENST00000492099 RFC4P35249 363 aa36.16■■■■□ 3.38
SH3GL3-204ENST00000492099 DDX10Q13206 875 aaKnown RBP36.16■■■■□ 3.38
SH3GL3-204ENST00000492099 NLGN2Q8NFZ4 835 aa36.16■■■■□ 3.38
SH3GL3-204ENST00000492099 VSIG10Q8N0Z9 540 aa36.15■■■■□ 3.38
SH3GL3-204ENST00000492099 RALBP1Q15311 655 aa36.14■■■■□ 3.38
SH3GL3-204ENST00000492099 GPR162Q16538 588 aa36.14■■■■□ 3.38
SH3GL3-204ENST00000492099 DNAJC10Q8IXB1 793 aa36.14■■■■□ 3.38
SH3GL3-204ENST00000492099 TTC5Q8N0Z6 440 aa36.14■■■■□ 3.38
SH3GL3-204ENST00000492099 NLGN1Q8N2Q7 840 aa36.13■■■■□ 3.37
SH3GL3-204ENST00000492099 TJP1Q07157 1748 aa36.13■■■■□ 3.37
SH3GL3-204ENST00000492099 MYH14Q7Z406 1995 aaKnown RBP36.13■■■■□ 3.37
SH3GL3-204ENST00000492099 KCPQ6ZWJ8 1503 aa36.12■■■■□ 3.37
SH3GL3-204ENST00000492099 CEMIPQ8WUJ3 1361 aa36.12■■■■□ 3.37
SH3GL3-204ENST00000492099 INTS5Q6P9B9 1019 aaKnown RBP36.11■■■■□ 3.37
SH3GL3-204ENST00000492099 CCDC87Q9NVE4 849 aa36.1■■■■□ 3.37
SH3GL3-204ENST00000492099 CYP19A1P11511 503 aaPredicted RBP36.09■■■■□ 3.37
SH3GL3-204ENST00000492099 RTF1Q92541 710 aaKnown RBP36.09■■■■□ 3.37
SH3GL3-204ENST00000492099 NEFMP07197 916 aa36.08■■■■□ 3.37
SH3GL3-204ENST00000492099 MMP10P09238 476 aa36.08■■■■□ 3.37
SH3GL3-204ENST00000492099 ZNF790Q6PG37 636 aa36.08■■■■□ 3.37
SH3GL3-204ENST00000492099 GYS1P13807 737 aa36.07■■■■□ 3.36
SH3GL3-204ENST00000492099 PELP1Q8IZL8 1130 aaKnown RBP36.06■■■■□ 3.36
SH3GL3-204ENST00000492099 HTATSF1O43719 755 aaKnown RBP36.05■■■■□ 3.36
SH3GL3-204ENST00000492099 UBR2Q8IWV8 1755 aa36.03■■■■□ 3.36
SH3GL3-204ENST00000492099 PNNQ9H307 717 aaKnown RBP36.03■■■■□ 3.36
SH3GL3-204ENST00000492099 BTBD11A6QL63 1104 aa36.02■■■■□ 3.36
SH3GL3-204ENST00000492099 STARD3NLO95772 234 aa36.02■■■■□ 3.36
SH3GL3-204ENST00000492099 ZEB1P37275 1124 aaPredicted RBP36.02■■■■□ 3.36
SH3GL3-204ENST00000492099 ZNF496Q96IT1 587 aaPredicted RBP36.02■■■■□ 3.36
SH3GL3-204ENST00000492099 TEX13AQ9BXU3 409 aaPredicted RBP36.01■■■■□ 3.36
SH3GL3-204ENST00000492099 SIPA1L3O60292 1781 aaPredicted RBP36.01■■■■□ 3.35
SH3GL3-204ENST00000492099 SOS1Q07889 1333 aaPredicted RBP36.01■■■■□ 3.35
SH3GL3-204ENST00000492099 USP42Q9H9J4 1324 aaKnown RBP36.01■■■■□ 3.35
SH3GL3-204ENST00000492099 MCM10Q7L590 875 aa36■■■■□ 3.35
SH3GL3-204ENST00000492099 FMNL2Q96PY5 1086 aa36■■■■□ 3.35
SH3GL3-204ENST00000492099 HEG1Q9ULI3 1381 aa36■■■■□ 3.35
SH3GL3-204ENST00000492099 UTRNP46939 3433 aa35.99■■■■□ 3.35
SH3GL3-204ENST00000492099 SRP68Q9UHB9 627 aaKnown RBP35.99■■■■□ 3.35
SH3GL3-204ENST00000492099 C4AP0C0L4 1744 aa35.99■■■■□ 3.35
SH3GL3-204ENST00000492099 GRIN3BO60391 1043 aa35.98■■■■□ 3.35
SH3GL3-204ENST00000492099 PLEKHF1Q96S99 279 aa35.98■■■■□ 3.35
SH3GL3-204ENST00000492099 ZBTB1Q9Y2K1 713 aa35.98■■■■□ 3.35
SH3GL3-204ENST00000492099 PARP3Q9Y6F1 533 aa35.98■■■■□ 3.35
SH3GL3-204ENST00000492099 ZPR1O75312 459 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms