RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
NCKAP1-206ENST00000492058 KCNQ4P56696 695 aa13.25□□□□□ -0.29
NCKAP1-206ENST00000492058 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
NCKAP1-206ENST00000492058 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
NCKAP1-206ENST00000492058 USP6P35125 1406 aa13.24□□□□□ -0.29
NCKAP1-206ENST00000492058 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
NCKAP1-206ENST00000492058 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
NCKAP1-206ENST00000492058 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
NCKAP1-206ENST00000492058 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 SLC16A10Q8TF71 515 aa13.23□□□□□ -0.29
NCKAP1-206ENST00000492058 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
NCKAP1-206ENST00000492058 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
NCKAP1-206ENST00000492058 IL2RBP14784 551 aa13.21□□□□□ -0.29
NCKAP1-206ENST00000492058 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
NCKAP1-206ENST00000492058 SLIT3O75094 1523 aa13.21□□□□□ -0.29
NCKAP1-206ENST00000492058 COL18A1P39060 1754 aa13.2□□□□□ -0.3
NCKAP1-206ENST00000492058 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
NCKAP1-206ENST00000492058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
NCKAP1-206ENST00000492058 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
NCKAP1-206ENST00000492058 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
NCKAP1-206ENST00000492058 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
NCKAP1-206ENST00000492058 EVC2Q86UK5 1308 aa13.18□□□□□ -0.3
NCKAP1-206ENST00000492058 HSPA6P17066 643 aa13.18□□□□□ -0.3
NCKAP1-206ENST00000492058 SLC27A3Q5K4L6 730 aa13.18□□□□□ -0.3
NCKAP1-206ENST00000492058 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
NCKAP1-206ENST00000492058 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
NCKAP1-206ENST00000492058 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
NCKAP1-206ENST00000492058 ANKRD24Q8TF21 1146 aa13.17□□□□□ -0.3
NCKAP1-206ENST00000492058 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
NCKAP1-206ENST00000492058 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
NCKAP1-206ENST00000492058 LTV1Q96GA3 475 aaPredicted RBP13.16□□□□□ -0.3
NCKAP1-206ENST00000492058 SHANK3Q9BYB0 1731 aa13.16□□□□□ -0.3
NCKAP1-206ENST00000492058 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
NCKAP1-206ENST00000492058 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
NCKAP1-206ENST00000492058 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
NCKAP1-206ENST00000492058 KTN1Q86UP2 1357 aaKnown RBP13.15□□□□□ -0.3
NCKAP1-206ENST00000492058 NHSQ6T4R5 1651 aa13.15□□□□□ -0.31
NCKAP1-206ENST00000492058 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
NCKAP1-206ENST00000492058 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
NCKAP1-206ENST00000492058 NME9Q86XW9 330 aa13.13□□□□□ -0.31
NCKAP1-206ENST00000492058 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
NCKAP1-206ENST00000492058 BTAF1O14981 1849 aa13.13□□□□□ -0.31
NCKAP1-206ENST00000492058 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
NCKAP1-206ENST00000492058 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
NCKAP1-206ENST00000492058 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
NCKAP1-206ENST00000492058 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
NCKAP1-206ENST00000492058 ABCC6O95255 1503 aa13.11□□□□□ -0.31
NCKAP1-206ENST00000492058 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
NCKAP1-206ENST00000492058 NFAT5O94916 1531 aa13.09□□□□□ -0.31
NCKAP1-206ENST00000492058 QRICH2Q9H0J4 1663 aa13.09□□□□□ -0.31
NCKAP1-206ENST00000492058 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
NCKAP1-206ENST00000492058 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
NCKAP1-206ENST00000492058 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
NCKAP1-206ENST00000492058 KIAA1210Q9ULL0 1709 aa13.07□□□□□ -0.32
NCKAP1-206ENST00000492058 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
NCKAP1-206ENST00000492058 USP47Q96K76 1375 aa13.06□□□□□ -0.32
NCKAP1-206ENST00000492058 APLP1P51693 650 aa13.05□□□□□ -0.32
NCKAP1-206ENST00000492058 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
NCKAP1-206ENST00000492058 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
NCKAP1-206ENST00000492058 IP6K1Q92551 441 aa13.05□□□□□ -0.32
NCKAP1-206ENST00000492058 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
NCKAP1-206ENST00000492058 STK25O00506 426 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 KIF3CO14782 793 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 PHF14O94880 888 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
NCKAP1-206ENST00000492058 FBLN1P23142 703 aa13.03□□□□□ -0.32
NCKAP1-206ENST00000492058 AMPHP49418 695 aa13.03□□□□□ -0.32
NCKAP1-206ENST00000492058 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
NCKAP1-206ENST00000492058 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
NCKAP1-206ENST00000492058 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
NCKAP1-206ENST00000492058 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
NCKAP1-206ENST00000492058 ADCY9O60503 1353 aa13.02□□□□□ -0.33
NCKAP1-206ENST00000492058 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
NCKAP1-206ENST00000492058 NSD2O96028 1365 aa13.02□□□□□ -0.33
NCKAP1-206ENST00000492058 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
NCKAP1-206ENST00000492058 PBX2P40425 430 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 DNAJC5GQ8N7S2 189 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 AK7Q96M32 723 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 SBNO2Q9Y2G9 1366 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
NCKAP1-206ENST00000492058 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
NCKAP1-206ENST00000492058 NEUROD1Q13562 356 aa13□□□□□ -0.33
NCKAP1-206ENST00000492058 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
NCKAP1-206ENST00000492058 TOMM70O94826 608 aa12.99□□□□□ -0.33
NCKAP1-206ENST00000492058 HTRA3P83110 453 aa12.99□□□□□ -0.33
NCKAP1-206ENST00000492058 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1-206ENST00000492058 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms