RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
SS18L1-204ENST00000491916 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
SS18L1-204ENST00000491916 CCNL1Q9UK58 526 aaPredicted RBP20.22■□□□□ 0.83
SS18L1-204ENST00000491916 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
SS18L1-204ENST00000491916 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
SS18L1-204ENST00000491916 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
SS18L1-204ENST00000491916 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
SS18L1-204ENST00000491916 DLG5Q8TDM6 1919 aa20.2■□□□□ 0.82
SS18L1-204ENST00000491916 LOC102724428A0A0B4J2F2 783 aa20.2■□□□□ 0.82
SS18L1-204ENST00000491916 SIK1P57059 783 aa20.2■□□□□ 0.82
SS18L1-204ENST00000491916 PDGFDQ9GZP0 370 aaPredicted RBP20.2■□□□□ 0.82
SS18L1-204ENST00000491916 ANP32CO43423 234 aa20.19■□□□□ 0.82
SS18L1-204ENST00000491916 ITPK1Q13572 414 aa20.19■□□□□ 0.82
SS18L1-204ENST00000491916 C5P01031 1676 aa20.18■□□□□ 0.82
SS18L1-204ENST00000491916 ZNF831Q5JPB2 1677 aa20.18■□□□□ 0.82
SS18L1-204ENST00000491916 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
SS18L1-204ENST00000491916 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
SS18L1-204ENST00000491916 NFE2L2Q16236 605 aa20.17■□□□□ 0.82
SS18L1-204ENST00000491916 STK32BQ9NY57 414 aa20.17■□□□□ 0.82
SS18L1-204ENST00000491916 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
SS18L1-204ENST00000491916 SLC39A6Q13433 755 aa20.16■□□□□ 0.82
SS18L1-204ENST00000491916 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
SS18L1-204ENST00000491916 MCM10Q7L590 875 aa20.16■□□□□ 0.82
SS18L1-204ENST00000491916 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
SS18L1-204ENST00000491916 AMIGO3Q86WK7 504 aa20.15■□□□□ 0.82
SS18L1-204ENST00000491916 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
SS18L1-204ENST00000491916 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SS18L1-204ENST00000491916 KCPQ6ZWJ8 1503 aa20.15■□□□□ 0.82
SS18L1-204ENST00000491916 C4BP0C0L5 1744 aa20.14■□□□□ 0.81
SS18L1-204ENST00000491916 QSER1Q2KHR3 1735 aa20.14■□□□□ 0.81
SS18L1-204ENST00000491916 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
SS18L1-204ENST00000491916 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
SS18L1-204ENST00000491916 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
SS18L1-204ENST00000491916 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
SS18L1-204ENST00000491916 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
SS18L1-204ENST00000491916 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
SS18L1-204ENST00000491916 PTCD1O75127 700 aaKnown RBP20.12■□□□□ 0.81
SS18L1-204ENST00000491916 TMPOP42166 694 aaKnown RBP20.12■□□□□ 0.81
SS18L1-204ENST00000491916 RUNDC1Q96C34 613 aa20.12■□□□□ 0.81
SS18L1-204ENST00000491916 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
SS18L1-204ENST00000491916 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
SS18L1-204ENST00000491916 TJP1Q07157 1748 aa20.11■□□□□ 0.81
SS18L1-204ENST00000491916 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
SS18L1-204ENST00000491916 KCNQ3O43525 872 aa20.11■□□□□ 0.81
SS18L1-204ENST00000491916 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
SS18L1-204ENST00000491916 TEFQ10587 303 aa20.1■□□□□ 0.81
SS18L1-204ENST00000491916 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
SS18L1-204ENST00000491916 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
SS18L1-204ENST00000491916 NEFMP07197 916 aa20.09■□□□□ 0.81
SS18L1-204ENST00000491916 ZNF790Q6PG37 636 aa20.09■□□□□ 0.81
SS18L1-204ENST00000491916 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
SS18L1-204ENST00000491916 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
SS18L1-204ENST00000491916 LRP5O75197 1615 aa20.09■□□□□ 0.81
SS18L1-204ENST00000491916 RIPK4P57078 832 aa20.08■□□□□ 0.81
SS18L1-204ENST00000491916 MRS2Q9HD23 443 aa20.08■□□□□ 0.81
SS18L1-204ENST00000491916 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
SS18L1-204ENST00000491916 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.81
SS18L1-204ENST00000491916 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
SS18L1-204ENST00000491916 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
SS18L1-204ENST00000491916 ZNF496Q96IT1 587 aaPredicted RBP20.07■□□□□ 0.8
SS18L1-204ENST00000491916 BTBD11A6QL63 1104 aa20.06■□□□□ 0.8
SS18L1-204ENST00000491916 RC3H1Q5TC82 1133 aaKnown RBP20.06■□□□□ 0.8
SS18L1-204ENST00000491916 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
SS18L1-204ENST00000491916 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
SS18L1-204ENST00000491916 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
SS18L1-204ENST00000491916 CNTNAP4Q9C0A0 1308 aa20.04■□□□□ 0.8
SS18L1-204ENST00000491916 ZBTB7AO95365 584 aa20.04■□□□□ 0.8
SS18L1-204ENST00000491916 HMGB2P26583 209 aaKnown RBP20.04■□□□□ 0.8
SS18L1-204ENST00000491916 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
SS18L1-204ENST00000491916 SGIP1Q9BQI5 828 aa20.04■□□□□ 0.8
SS18L1-204ENST00000491916 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
SS18L1-204ENST00000491916 COL24A1Q17RW2 1714 aa20.04■□□□□ 0.8
SS18L1-204ENST00000491916 APAF1O14727 1248 aa20.03■□□□□ 0.8
SS18L1-204ENST00000491916 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
SS18L1-204ENST00000491916 PTGER2P43116 358 aa20.03■□□□□ 0.8
SS18L1-204ENST00000491916 AK7Q96M32 723 aa20.03■□□□□ 0.8
SS18L1-204ENST00000491916 HEG1Q9ULI3 1381 aa20.03■□□□□ 0.8
SS18L1-204ENST00000491916 CRKLP46109 303 aaKnown RBP20.02■□□□□ 0.8
SS18L1-204ENST00000491916 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
SS18L1-204ENST00000491916 KDM3BQ7LBC6 1761 aa20.02■□□□□ 0.8
SS18L1-204ENST00000491916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
SS18L1-204ENST00000491916 GNPATO15228 680 aa20.01■□□□□ 0.79
SS18L1-204ENST00000491916 SSFA2P28290 1259 aa20.01■□□□□ 0.79
SS18L1-204ENST00000491916 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
SS18L1-204ENST00000491916 MTFR1LQ9H019 292 aa20.01■□□□□ 0.79
SS18L1-204ENST00000491916 ATF5Q9Y2D1 282 aaPredicted RBP20.01■□□□□ 0.79
SS18L1-204ENST00000491916 RPS6KA4O75676 772 aa20■□□□□ 0.79
SS18L1-204ENST00000491916 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
SS18L1-204ENST00000491916 SPON1Q9HCB6 807 aa20■□□□□ 0.79
SS18L1-204ENST00000491916 PRAMEF22A3QJZ6 481 aa19.99■□□□□ 0.79
SS18L1-204ENST00000491916 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
SS18L1-204ENST00000491916 PHF14O94880 888 aa19.98■□□□□ 0.79
SS18L1-204ENST00000491916 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
SS18L1-204ENST00000491916 FLAD1Q8NFF5 587 aa19.98■□□□□ 0.79
SS18L1-204ENST00000491916 EIF4A1P60842 406 aaKnown RBP19.97■□□□□ 0.79
SS18L1-204ENST00000491916 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
SS18L1-204ENST00000491916 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
SS18L1-204ENST00000491916 USP16Q9Y5T5 823 aa19.97■□□□□ 0.79
SS18L1-204ENST00000491916 ARHGEF1Q92888 912 aaKnown RBP19.96■□□□□ 0.79
SS18L1-204ENST00000491916 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms