RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 CCDC7Q96M83 1385 aa7.08□□□□□ -1.28
UBE2D4-211ENST00000491770 USP54Q70EL1 1684 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 SPDYE16A6NNV3 312 aaPredicted RBP7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 TRIM37O94972 964 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 APBA3O96018 575 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 FAM182BQ5T319 152 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 LARP1Q6PKG0 1096 aaKnown RBP7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 COG3Q96JB2 828 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 NLRP2Q9NX02 1062 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 PPP1R1BQ9UD71 204 aaPredicted RBP7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 A0A1W2PP64 1363 aa7.07□□□□□ -1.28
UBE2D4-211ENST00000491770 WDR17Q8IZU2 1322 aa7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 LRP5O75197 1615 aa7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 PSDA5PKW4 1024 aaPredicted RBP7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 AMPHP49418 695 aa7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 TNS2Q63HR2 1409 aa7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 NFAT5O94916 1531 aa7.06□□□□□ -1.28
UBE2D4-211ENST00000491770 RGPD3A6NKT7 1758 aaPredicted RBP7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 RGPD4Q7Z3J3 1758 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 NUP188Q5SRE5 1749 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 EN1Q05925 392 aaPredicted RBP7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 BARGINQ6ZT62 677 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 NME9Q86XW9 330 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 RREB1Q92766 1687 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 ANKRD36BQ8N2N9 1353 aa7.05□□□□□ -1.28
UBE2D4-211ENST00000491770 CLSPNQ9HAW4 1339 aa7.04□□□□□ -1.28
UBE2D4-211ENST00000491770 ST20-MTHFSA0A0A6YYL1 179 aa7.04□□□□□ -1.28
UBE2D4-211ENST00000491770 SLC34A2O95436 690 aa7.04□□□□□ -1.28
UBE2D4-211ENST00000491770 PTCD2Q8WV60 388 aaKnown RBP7.04□□□□□ -1.28
UBE2D4-211ENST00000491770 NHSQ6T4R5 1651 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 DISP2A7MBM2 1401 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 EXOC5O00471 708 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 MAP3K9P80192 1104 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 R3HDM1Q15032 1099 aaKnown RBP7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 SMYD5Q6GMV2 418 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 ZC3H15Q8WU90 426 aaKnown RBP7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 DOT1LQ8TEK3 1739 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 RTL1A6NKG5 1358 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 SBF2Q86WG5 1849 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 MYOM1P52179 1685 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 COL18A1P39060 1754 aa7.03□□□□□ -1.28
UBE2D4-211ENST00000491770 NSD3Q9BZ95 1437 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 ANKRD26Q9UPS8 1709 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 TULP1O00294 542 aaPredicted RBP7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 IL2RBP14784 551 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 RBM26Q5T8P6 1007 aaKnown RBP7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 ANKRD24Q8TF21 1146 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
UBE2D4-211ENST00000491770 ERBB3P21860 1342 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 USP31Q70CQ4 1352 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 PPM1GO15355 546 aaPredicted RBP7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 ONECUT3O60422 494 aaPredicted RBP7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 PTGER2P43116 358 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 EZH2Q15910 746 aaKnown RBP7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 ARHGEF25Q86VW2 580 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 RAPGEF4Q8WZA2 1011 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 STK32BQ9NY57 414 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 BTAF1O14981 1849 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 CGNL1Q0VF96 1302 aa7.01□□□□□ -1.29
UBE2D4-211ENST00000491770 EIF4G2P78344 907 aaKnown RBP eCLIP7□□□□□ -1.29
UBE2D4-211ENST00000491770 PUS7Q96PZ0 661 aaKnown RBP7□□□□□ -1.29
UBE2D4-211ENST00000491770 CD163L1Q9NR16 1453 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 PEAK1Q9H792 1746 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 FLT4P35916 1363 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 EVI5O60447 810 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 TATP17735 454 aaPredicted RBP6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 DDX54Q8TDD1 881 aaKnown RBP6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 ACSBG1Q96GR2 724 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 GGNBP2Q9H3C7 697 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 ANO8Q9HCE9 1232 aaPredicted RBP6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 RGPD2P0DJD1 1756 aa6.99□□□□□ -1.29
UBE2D4-211ENST00000491770 ZMYND10O75800 440 aa6.98□□□□□ -1.29
UBE2D4-211ENST00000491770 OSBPP22059 807 aa6.98□□□□□ -1.29
UBE2D4-211ENST00000491770 SPON1Q9HCB6 807 aa6.98□□□□□ -1.29
UBE2D4-211ENST00000491770 MAP3K19Q56UN5 1328 aa6.98□□□□□ -1.29
UBE2D4-211ENST00000491770 TBC1D12O60347 775 aa6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 HOXB3P14651 431 aaPredicted RBP6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 RRS1Q15050 365 aaKnown RBP6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 PCDHGA4Q9Y5G9 962 aa6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 PCDH11XQ9BZA7 1347 aa6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 PCDH11YQ9BZA8 1340 aa6.97□□□□□ -1.29
UBE2D4-211ENST00000491770 GRXCR2A6NFK2 248 aa6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 HMGB2P26583 209 aaKnown RBP6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 HOXC9P31274 260 aa6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 TNNT2P45379 298 aaPredicted RBP6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 PRIM1P49642 420 aaKnown RBP6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 IP6K1Q92551 441 aa6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 TESK2Q96S53 571 aa6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 AXIN2Q9Y2T1 843 aa6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 MAP2P11137 1827 aaKnown RBP6.96□□□□□ -1.3
UBE2D4-211ENST00000491770 NSD2O96028 1365 aa6.95□□□□□ -1.3
UBE2D4-211ENST00000491770 KIF24Q5T7B8 1368 aa6.95□□□□□ -1.3
UBE2D4-211ENST00000491770 GPR37O15354 613 aa6.95□□□□□ -1.3
UBE2D4-211ENST00000491770 USHBP1Q8N6Y0 703 aa6.95□□□□□ -1.3
UBE2D4-211ENST00000491770 DDX12PQ92771 950 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms