RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 SMARCC1Q92922 1105 aaPredicted RBP20.83■□□□□ 0.93
FXR1-221ENST00000491674 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
FXR1-221ENST00000491674 MRC1P22897 1456 aa20.82■□□□□ 0.92
FXR1-221ENST00000491674 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
FXR1-221ENST00000491674 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
FXR1-221ENST00000491674 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
FXR1-221ENST00000491674 TSPYL4Q9UJ04 414 aa20.82■□□□□ 0.92
FXR1-221ENST00000491674 ADAMTS7Q9UKP4 1686 aa20.81■□□□□ 0.92
FXR1-221ENST00000491674 CHL1O00533 1208 aa20.8■□□□□ 0.92
FXR1-221ENST00000491674 CCDC125Q86Z20 511 aa20.8■□□□□ 0.92
FXR1-221ENST00000491674 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
FXR1-221ENST00000491674 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
FXR1-221ENST00000491674 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
FXR1-221ENST00000491674 E9PSI1 815 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 APBA3O96018 575 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 ZNF853P0CG23 659 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 ILDR2Q71H61 639 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 PTF1AQ7RTS3 328 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 ATG3Q9NT62 314 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 ASAP1Q9ULH1 1129 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 SCN11AQ9UI33 1791 aa20.79■□□□□ 0.92
FXR1-221ENST00000491674 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
FXR1-221ENST00000491674 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
FXR1-221ENST00000491674 TOGARAM1Q9Y4F4 1720 aa20.77■□□□□ 0.92
FXR1-221ENST00000491674 MBIPQ9NS73 344 aa20.76■□□□□ 0.91
FXR1-221ENST00000491674 NHSQ6T4R5 1651 aa20.76■□□□□ 0.91
FXR1-221ENST00000491674 PALLDQ8WX93 1383 aa20.75■□□□□ 0.91
FXR1-221ENST00000491674 FMNL2Q96PY5 1086 aa20.75■□□□□ 0.91
FXR1-221ENST00000491674 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
FXR1-221ENST00000491674 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
FXR1-221ENST00000491674 PTCD1O75127 700 aaKnown RBP20.74■□□□□ 0.91
FXR1-221ENST00000491674 BAG6P46379 1132 aa20.74■□□□□ 0.91
FXR1-221ENST00000491674 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
FXR1-221ENST00000491674 PLSCR1O15162 318 aa20.73■□□□□ 0.91
FXR1-221ENST00000491674 KCNQ3O43525 872 aa20.73■□□□□ 0.91
FXR1-221ENST00000491674 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
FXR1-221ENST00000491674 TSR2Q969E8 191 aaKnown RBP20.73■□□□□ 0.91
FXR1-221ENST00000491674 SPINK5Q9NQ38 1064 aaPredicted RBP20.73■□□□□ 0.91
FXR1-221ENST00000491674 HMGB2P26583 209 aaKnown RBP20.72■□□□□ 0.91
FXR1-221ENST00000491674 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
FXR1-221ENST00000491674 ZNF496Q96IT1 587 aaPredicted RBP20.72■□□□□ 0.91
FXR1-221ENST00000491674 LOC102724428A0A0B4J2F2 783 aa20.71■□□□□ 0.91
FXR1-221ENST00000491674 SIK1P57059 783 aa20.71■□□□□ 0.91
FXR1-221ENST00000491674 VSIG10Q8N0Z9 540 aa20.71■□□□□ 0.91
FXR1-221ENST00000491674 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
FXR1-221ENST00000491674 UPF1Q92900 1129 aaKnown RBP eCLIP20.7■□□□□ 0.9
FXR1-221ENST00000491674 ITGB4P16144 1822 aa20.69■□□□□ 0.9
FXR1-221ENST00000491674 SBF2Q86WG5 1849 aa20.69■□□□□ 0.9
FXR1-221ENST00000491674 SNRPA1P09661 255 aaKnown RBP20.69■□□□□ 0.9
FXR1-221ENST00000491674 SLC27A3Q5K4L6 730 aa20.69■□□□□ 0.9
FXR1-221ENST00000491674 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
FXR1-221ENST00000491674 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
FXR1-221ENST00000491674 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
FXR1-221ENST00000491674 TRMT2AQ8IZ69 625 aaKnown RBP20.68■□□□□ 0.9
FXR1-221ENST00000491674 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
FXR1-221ENST00000491674 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
FXR1-221ENST00000491674 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
FXR1-221ENST00000491674 EN1Q05925 392 aaPredicted RBP20.67■□□□□ 0.9
FXR1-221ENST00000491674 TXNRD1Q16881 649 aa20.67■□□□□ 0.9
FXR1-221ENST00000491674 EP400Q96L91 3159 aa20.67■□□□□ 0.9
FXR1-221ENST00000491674 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
FXR1-221ENST00000491674 HOXB7P09629 217 aa20.66■□□□□ 0.9
FXR1-221ENST00000491674 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
FXR1-221ENST00000491674 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
FXR1-221ENST00000491674 SOS1Q07889 1333 aaPredicted RBP20.66■□□□□ 0.9
FXR1-221ENST00000491674 BTAF1O14981 1849 aa20.66■□□□□ 0.9
FXR1-221ENST00000491674 STARD3NLO95772 234 aa20.65■□□□□ 0.9
FXR1-221ENST00000491674 CAMKK2Q96RR4 588 aa20.65■□□□□ 0.9
FXR1-221ENST00000491674 VIRMAQ69YN4 1812 aaKnown RBP20.64■□□□□ 0.9
FXR1-221ENST00000491674 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
FXR1-221ENST00000491674 DEFB132Q7Z7B7 95 aa20.64■□□□□ 0.89
FXR1-221ENST00000491674 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.89
FXR1-221ENST00000491674 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
FXR1-221ENST00000491674 ELL2O00472 640 aaPredicted RBP20.63■□□□□ 0.89
FXR1-221ENST00000491674 EZH2Q15910 746 aaKnown RBP20.63■□□□□ 0.89
FXR1-221ENST00000491674 KRT24Q2M2I5 525 aa20.63■□□□□ 0.89
FXR1-221ENST00000491674 TWISTNBQ3B726 338 aaPredicted RBP20.63■□□□□ 0.89
FXR1-221ENST00000491674 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
FXR1-221ENST00000491674 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
FXR1-221ENST00000491674 PROM2Q8N271 834 aa20.62■□□□□ 0.89
FXR1-221ENST00000491674 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
FXR1-221ENST00000491674 CT47B1P0C2W7 299 aaPredicted RBP20.61■□□□□ 0.89
FXR1-221ENST00000491674 ITPK1Q13572 414 aa20.61■□□□□ 0.89
FXR1-221ENST00000491674 TNS1Q9HBL0 1735 aaKnown RBP20.61■□□□□ 0.89
FXR1-221ENST00000491674 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
FXR1-221ENST00000491674 KCNQ4P56696 695 aa20.6■□□□□ 0.89
FXR1-221ENST00000491674 TSPYL6Q8N831 410 aa20.6■□□□□ 0.89
FXR1-221ENST00000491674 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
FXR1-221ENST00000491674 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
FXR1-221ENST00000491674 PRAMEF22A3QJZ6 481 aa20.59■□□□□ 0.89
FXR1-221ENST00000491674 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
FXR1-221ENST00000491674 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
FXR1-221ENST00000491674 VAMP4O75379 141 aa20.58■□□□□ 0.89
FXR1-221ENST00000491674 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
FXR1-221ENST00000491674 CCDC30Q5VVM6 783 aa20.58■□□□□ 0.89
FXR1-221ENST00000491674 LINC00116Q8NCU8 138 aa20.58■□□□□ 0.89
FXR1-221ENST00000491674 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
FXR1-221ENST00000491674 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
FXR1-221ENST00000491674 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms