RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 ABCC6O95255 1503 aa9.36□□□□□ -0.91
PBX3-208ENST00000491160 EVC2Q86UK5 1308 aa9.36□□□□□ -0.91
PBX3-208ENST00000491160 IL2RBP14784 551 aa9.36□□□□□ -0.91
PBX3-208ENST00000491160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.36□□□□□ -0.91
PBX3-208ENST00000491160 TFCP2L1Q9NZI6 479 aa9.36□□□□□ -0.91
PBX3-208ENST00000491160 COL24A1Q17RW2 1714 aa9.36□□□□□ -0.91
PBX3-208ENST00000491160 LTN1O94822 1766 aa9.35□□□□□ -0.91
PBX3-208ENST00000491160 PSEN1P49768 467 aa9.35□□□□□ -0.91
PBX3-208ENST00000491160 VASPP50552 380 aaPredicted RBP9.35□□□□□ -0.91
PBX3-208ENST00000491160 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
PBX3-208ENST00000491160 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
PBX3-208ENST00000491160 SLC16A10Q8TF71 515 aa9.35□□□□□ -0.91
PBX3-208ENST00000491160 KTN1Q86UP2 1357 aaKnown RBP9.35□□□□□ -0.91
PBX3-208ENST00000491160 ERBB3P21860 1342 aa9.34□□□□□ -0.91
PBX3-208ENST00000491160 TTC21AQ8NDW8 1320 aa9.34□□□□□ -0.91
PBX3-208ENST00000491160 G3V3G9 751 aa9.34□□□□□ -0.91
PBX3-208ENST00000491160 ANKRD24Q8TF21 1146 aa9.34□□□□□ -0.91
PBX3-208ENST00000491160 SYTL4Q96C24 671 aaPredicted RBP9.34□□□□□ -0.91
PBX3-208ENST00000491160 ATP10DQ9P241 1426 aa9.33□□□□□ -0.92
PBX3-208ENST00000491160 GRIN3BO60391 1043 aa9.33□□□□□ -0.92
PBX3-208ENST00000491160 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
PBX3-208ENST00000491160 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
PBX3-208ENST00000491160 NME9Q86XW9 330 aa9.33□□□□□ -0.92
PBX3-208ENST00000491160 ZNF526Q8TF50 670 aaPredicted RBP9.33□□□□□ -0.92
PBX3-208ENST00000491160 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
PBX3-208ENST00000491160 LTV1Q96GA3 475 aaPredicted RBP9.32□□□□□ -0.92
PBX3-208ENST00000491160 MON2Q7Z3U7 1717 aa9.31□□□□□ -0.92
PBX3-208ENST00000491160 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
PBX3-208ENST00000491160 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
PBX3-208ENST00000491160 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
PBX3-208ENST00000491160 WWC3Q9ULE0 1092 aa9.31□□□□□ -0.92
PBX3-208ENST00000491160 LY75O60449 1722 aa9.31□□□□□ -0.92
PBX3-208ENST00000491160 DOT1LQ8TEK3 1739 aa9.31□□□□□ -0.92
PBX3-208ENST00000491160 USP31Q70CQ4 1352 aa9.3□□□□□ -0.92
PBX3-208ENST00000491160 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
PBX3-208ENST00000491160 CCNL1Q9UK58 526 aaPredicted RBP9.3□□□□□ -0.92
PBX3-208ENST00000491160 HSPA6P17066 643 aa9.29□□□□□ -0.92
PBX3-208ENST00000491160 TMC1Q8TDI8 760 aa9.29□□□□□ -0.92
PBX3-208ENST00000491160 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
PBX3-208ENST00000491160 RGPD2P0DJD1 1756 aa9.29□□□□□ -0.92
PBX3-208ENST00000491160 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
PBX3-208ENST00000491160 NSD2O96028 1365 aa9.28□□□□□ -0.92
PBX3-208ENST00000491160 ANKRD36BQ8N2N9 1353 aa9.28□□□□□ -0.92
PBX3-208ENST00000491160 SBNO2Q9Y2G9 1366 aa9.28□□□□□ -0.92
PBX3-208ENST00000491160 FBLN1P23142 703 aa9.28□□□□□ -0.92
PBX3-208ENST00000491160 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
PBX3-208ENST00000491160 USP54Q70EL1 1684 aa9.27□□□□□ -0.93
PBX3-208ENST00000491160 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
PBX3-208ENST00000491160 IP6K1Q92551 441 aa9.27□□□□□ -0.93
PBX3-208ENST00000491160 SLC12A5Q9H2X9 1139 aa9.27□□□□□ -0.93
PBX3-208ENST00000491160 ROCK2O75116 1388 aaKnown RBP9.26□□□□□ -0.93
PBX3-208ENST00000491160 SMIM5Q71RC9 77 aa9.26□□□□□ -0.93
PBX3-208ENST00000491160 ZCRB1Q8TBF4 217 aaKnown RBP9.26□□□□□ -0.93
PBX3-208ENST00000491160 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
PBX3-208ENST00000491160 ADCY9O60503 1353 aa9.25□□□□□ -0.93
PBX3-208ENST00000491160 HDGFL2Q7Z4V5 671 aaPredicted RBP9.25□□□□□ -0.93
PBX3-208ENST00000491160 CD2APQ9Y5K6 639 aa9.25□□□□□ -0.93
PBX3-208ENST00000491160 USP47Q96K76 1375 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 C5P01031 1676 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
PBX3-208ENST00000491160 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 USHBP1Q8N6Y0 703 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 BOLA1Q9Y3E2 137 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 MEGF6O75095 1541 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
PBX3-208ENST00000491160 KIF3CO14782 793 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 HOXC9P31274 260 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 AMPHP49418 695 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 MAP3K19Q56UN5 1328 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 A0A1W2PP64 1363 aa9.23□□□□□ -0.93
PBX3-208ENST00000491160 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
PBX3-208ENST00000491160 PHF14O94880 888 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 DOK7Q18PE1 504 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 NBPF6Q5VWK0 638 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 MPRIPQ6WCQ1 1025 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 NBPF4Q96M43 638 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 KRTAP3-3Q9BYR6 98 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
PBX3-208ENST00000491160 SPOCK2Q92563 424 aa9.21□□□□□ -0.94
PBX3-208ENST00000491160 TERF2IPQ9NYB0 399 aa9.21□□□□□ -0.94
PBX3-208ENST00000491160 C4BP0C0L5 1744 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 TOGARAM1Q9Y4F4 1720 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 RIMBP2O15034 1052 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 RRS1Q15050 365 aaKnown RBP9.2□□□□□ -0.94
PBX3-208ENST00000491160 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 COG3Q96JB2 828 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 AK7Q96M32 723 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
PBX3-208ENST00000491160 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
PBX3-208ENST00000491160 ITGB4P16144 1822 aa9.19□□□□□ -0.94
PBX3-208ENST00000491160 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
PBX3-208ENST00000491160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
PBX3-208ENST00000491160 APLP1P51693 650 aa9.19□□□□□ -0.94
PBX3-208ENST00000491160 HTRA3P83110 453 aa9.19□□□□□ -0.94
PBX3-208ENST00000491160 RAPGEF4Q8WZA2 1011 aa9.19□□□□□ -0.94
PBX3-208ENST00000491160 CARD11Q9BXL7 1154 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms