RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 MMP10P09238 476 aa11.13□□□□□ -0.63
ALMS1-205ENST00000490821 AMPHP49418 695 aa11.13□□□□□ -0.63
ALMS1-205ENST00000490821 LINC00116Q8NCU8 138 aa11.13□□□□□ -0.63
ALMS1-205ENST00000490821 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
ALMS1-205ENST00000490821 TNRC6CQ9HCJ0 1690 aaKnown RBP11.13□□□□□ -0.63
ALMS1-205ENST00000490821 KCPQ6ZWJ8 1503 aa11.13□□□□□ -0.63
ALMS1-205ENST00000490821 RTL1A6NKG5 1358 aa11.13□□□□□ -0.63
ALMS1-205ENST00000490821 PCDH11XQ9BZA7 1347 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 PCDH11YQ9BZA8 1340 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 CYP27B1O15528 508 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 TGFB2P61812 414 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 ARHGAP27Q6ZUM4 889 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 SMARCC1Q92922 1105 aaPredicted RBP11.12□□□□□ -0.63
ALMS1-205ENST00000490821 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
ALMS1-205ENST00000490821 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
ALMS1-205ENST00000490821 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
ALMS1-205ENST00000490821 PIGBQ92521 554 aa11.11□□□□□ -0.63
ALMS1-205ENST00000490821 COG3Q96JB2 828 aa11.11□□□□□ -0.63
ALMS1-205ENST00000490821 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
ALMS1-205ENST00000490821 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
ALMS1-205ENST00000490821 GNPATO15228 680 aa11.1□□□□□ -0.63
ALMS1-205ENST00000490821 DPEP1P16444 411 aa11.1□□□□□ -0.63
ALMS1-205ENST00000490821 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
ALMS1-205ENST00000490821 SIK1P57059 783 aa11.1□□□□□ -0.63
ALMS1-205ENST00000490821 ITPK1Q13572 414 aa11.1□□□□□ -0.63
ALMS1-205ENST00000490821 RRS1Q15050 365 aaKnown RBP11.1□□□□□ -0.63
ALMS1-205ENST00000490821 FCHSD2O94868 740 aa11.09□□□□□ -0.63
ALMS1-205ENST00000490821 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
ALMS1-205ENST00000490821 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
ALMS1-205ENST00000490821 KCNA3P22001 575 aa11.09□□□□□ -0.63
ALMS1-205ENST00000490821 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
ALMS1-205ENST00000490821 SLC34A2O95436 690 aa11.08□□□□□ -0.64
ALMS1-205ENST00000490821 RRAGCQ9HB90 399 aa11.08□□□□□ -0.64
ALMS1-205ENST00000490821 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
ALMS1-205ENST00000490821 SMG6Q86US8 1419 aaKnown RBP11.08□□□□□ -0.64
ALMS1-205ENST00000490821 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
ALMS1-205ENST00000490821 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
ALMS1-205ENST00000490821 NKX1-1Q15270 411 aaPredicted RBP11.07□□□□□ -0.64
ALMS1-205ENST00000490821 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
ALMS1-205ENST00000490821 SMC1BQ8NDV3 1235 aa11.07□□□□□ -0.64
ALMS1-205ENST00000490821 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
ALMS1-205ENST00000490821 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
ALMS1-205ENST00000490821 INSRP06213 1382 aa11.06□□□□□ -0.64
ALMS1-205ENST00000490821 ZNF831Q5JPB2 1677 aa11.06□□□□□ -0.64
ALMS1-205ENST00000490821 SIN3AQ96ST3 1273 aa11.06□□□□□ -0.64
ALMS1-205ENST00000490821 ASAP1Q9ULH1 1129 aa11.06□□□□□ -0.64
ALMS1-205ENST00000490821 NCAPD2Q15021 1401 aa11.06□□□□□ -0.64
ALMS1-205ENST00000490821 KDRP35968 1356 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 TMF1P82094 1093 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 NLGN1Q8N2Q7 840 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 CCDC87Q9NVE4 849 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 RNF181Q9P0P0 153 aa11.05□□□□□ -0.64
ALMS1-205ENST00000490821 GYS1P13807 737 aa11.04□□□□□ -0.64
ALMS1-205ENST00000490821 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
ALMS1-205ENST00000490821 CARD11Q9BXL7 1154 aa11.04□□□□□ -0.64
ALMS1-205ENST00000490821 ATG3Q9NT62 314 aa11.04□□□□□ -0.64
ALMS1-205ENST00000490821 FLT4P35916 1363 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 KIF20BQ96Q89 1820 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 FYB1O15117 783 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 ARHGEF1Q92888 912 aaKnown RBP11.03□□□□□ -0.64
ALMS1-205ENST00000490821 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 TMOD3Q9NYL9 352 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 PIM2Q9P1W9 311 aa11.03□□□□□ -0.64
ALMS1-205ENST00000490821 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
ALMS1-205ENST00000490821 KDM6AO15550 1401 aaPredicted RBP11.02□□□□□ -0.64
ALMS1-205ENST00000490821 DALRD3Q5D0E6 543 aaKnown RBP11.02□□□□□ -0.65
ALMS1-205ENST00000490821 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
ALMS1-205ENST00000490821 KIF24Q5T7B8 1368 aa11.02□□□□□ -0.65
ALMS1-205ENST00000490821 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
ALMS1-205ENST00000490821 TESK2Q96S53 571 aa11.01□□□□□ -0.65
ALMS1-205ENST00000490821 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
ALMS1-205ENST00000490821 ZC3H4Q9UPT8 1303 aaKnown RBP11.01□□□□□ -0.65
ALMS1-205ENST00000490821 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
ALMS1-205ENST00000490821 CHRNA5P30532 468 aa11□□□□□ -0.65
ALMS1-205ENST00000490821 NEUROD1Q13562 356 aa11□□□□□ -0.65
ALMS1-205ENST00000490821 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
ALMS1-205ENST00000490821 SPG7Q9UQ90 795 aa11□□□□□ -0.65
ALMS1-205ENST00000490821 CNTNAP4Q9C0A0 1308 aa11□□□□□ -0.65
ALMS1-205ENST00000490821 ADAMTS7Q9UKP4 1686 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 VEGFAP15692 232 aaPredicted RBP10.99□□□□□ -0.65
ALMS1-205ENST00000490821 PHKG2P15735 406 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 RFC4P35249 363 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 RASSF7Q02833 373 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 DDR1Q08345 913 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.99□□□□□ -0.65
ALMS1-205ENST00000490821 AFDNP55196 1824 aaKnown RBP10.99□□□□□ -0.65
ALMS1-205ENST00000490821 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
ALMS1-205ENST00000490821 GLTPD2A6NH11 291 aa10.98□□□□□ -0.65
ALMS1-205ENST00000490821 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
ALMS1-205ENST00000490821 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
ALMS1-205ENST00000490821 POTECB2RU33 542 aa10.97□□□□□ -0.65
ALMS1-205ENST00000490821 FKBP8Q14318 412 aa10.97□□□□□ -0.65
ALMS1-205ENST00000490821 IFNL2Q8IZJ0 200 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms