RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 TRIM35Q9UPQ4 493 aa25.94■■□□□ 1.74
SHROOM3-209ENST00000490690 TOGARAM1Q9Y4F4 1720 aa25.93■■□□□ 1.74
SHROOM3-209ENST00000490690 BTBD11A6QL63 1104 aa25.92■■□□□ 1.74
SHROOM3-209ENST00000490690 DCTN1Q14203 1278 aa25.92■■□□□ 1.74
SHROOM3-209ENST00000490690 KAT6BQ8WYB5 2073 aa25.92■■□□□ 1.74
SHROOM3-209ENST00000490690 WDR63Q8IWG1 891 aa25.91■■□□□ 1.74
SHROOM3-209ENST00000490690 WWC1Q8IX03 1113 aa25.91■■□□□ 1.74
SHROOM3-209ENST00000490690 IL16Q14005 1332 aa25.9■■□□□ 1.74
SHROOM3-209ENST00000490690 DLG5Q8TDM6 1919 aa25.9■■□□□ 1.74
SHROOM3-209ENST00000490690 GNAI1P63096 354 aa25.89■■□□□ 1.74
SHROOM3-209ENST00000490690 SLC27A3Q5K4L6 730 aa25.89■■□□□ 1.74
SHROOM3-209ENST00000490690 PALLDQ8WX93 1383 aa25.89■■□□□ 1.74
SHROOM3-209ENST00000490690 EP400Q96L91 3159 aa25.88■■□□□ 1.73
SHROOM3-209ENST00000490690 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
SHROOM3-209ENST00000490690 IFT57Q9NWB7 429 aa25.88■■□□□ 1.73
SHROOM3-209ENST00000490690 ITGB4P16144 1822 aa25.88■■□□□ 1.73
SHROOM3-209ENST00000490690 ZNF790Q6PG37 636 aa25.87■■□□□ 1.73
SHROOM3-209ENST00000490690 ATG3Q9NT62 314 aa25.87■■□□□ 1.73
SHROOM3-209ENST00000490690 BTAF1O14981 1849 aa25.86■■□□□ 1.73
SHROOM3-209ENST00000490690 TNS1Q9HBL0 1735 aaKnown RBP25.86■■□□□ 1.73
SHROOM3-209ENST00000490690 RGPD3A6NKT7 1758 aaPredicted RBP25.86■■□□□ 1.73
SHROOM3-209ENST00000490690 RGPD4Q7Z3J3 1758 aa25.86■■□□□ 1.73
SHROOM3-209ENST00000490690 SOCS7O14512 581 aa25.85■■□□□ 1.73
SHROOM3-209ENST00000490690 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
SHROOM3-209ENST00000490690 TSPYL4Q9UJ04 414 aa25.85■■□□□ 1.73
SHROOM3-209ENST00000490690 VSIG10Q8N0Z9 540 aa25.84■■□□□ 1.73
SHROOM3-209ENST00000490690 FMNL2Q96PY5 1086 aa25.84■■□□□ 1.73
SHROOM3-209ENST00000490690 ASAP1Q9ULH1 1129 aa25.84■■□□□ 1.73
SHROOM3-209ENST00000490690 HNRNPUQ00839 825 aaKnown RBP eCLIP25.83■■□□□ 1.73
SHROOM3-209ENST00000490690 PTF1AQ7RTS3 328 aa25.83■■□□□ 1.73
SHROOM3-209ENST00000490690 TEX13AQ9BXU3 409 aaPredicted RBP25.83■■□□□ 1.73
SHROOM3-209ENST00000490690 SALL2Q9Y467 1007 aaPredicted RBP25.83■■□□□ 1.73
SHROOM3-209ENST00000490690 VIRMAQ69YN4 1812 aaKnown RBP25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 LOC102724428A0A0B4J2F2 783 aa25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 CHL1O00533 1208 aa25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 SIK1P57059 783 aa25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 CHMP4AQ9BY43 222 aa25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 MYH16Q9H6N6 1097 aa25.82■■□□□ 1.72
SHROOM3-209ENST00000490690 TXNRD1Q16881 649 aa25.81■■□□□ 1.72
SHROOM3-209ENST00000490690 CAMKK2Q96RR4 588 aa25.81■■□□□ 1.72
SHROOM3-209ENST00000490690 CCNL1Q9UK58 526 aaPredicted RBP25.81■■□□□ 1.72
SHROOM3-209ENST00000490690 SIPA1L3O60292 1781 aaPredicted RBP25.81■■□□□ 1.72
SHROOM3-209ENST00000490690 EN1Q05925 392 aaPredicted RBP25.8■■□□□ 1.72
SHROOM3-209ENST00000490690 GOLGA2Q08379 1002 aa25.8■■□□□ 1.72
SHROOM3-209ENST00000490690 RBM42Q9BTD8 480 aaKnown RBP25.8■■□□□ 1.72
SHROOM3-209ENST00000490690 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
SHROOM3-209ENST00000490690 ZNF853P0CG23 659 aa25.79■■□□□ 1.72
SHROOM3-209ENST00000490690 SLC39A6Q13433 755 aa25.79■■□□□ 1.72
SHROOM3-209ENST00000490690 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
SHROOM3-209ENST00000490690 PAPPAQ13219 1627 aa25.78■■□□□ 1.72
SHROOM3-209ENST00000490690 E9PSI1 815 aa25.77■■□□□ 1.72
SHROOM3-209ENST00000490690 PTCD1O75127 700 aaKnown RBP25.77■■□□□ 1.72
SHROOM3-209ENST00000490690 ATP6V1AP38606 617 aa25.77■■□□□ 1.72
SHROOM3-209ENST00000490690 SOS1Q07889 1333 aaPredicted RBP25.77■■□□□ 1.72
SHROOM3-209ENST00000490690 ZBED9Q6R2W3 1325 aa25.77■■□□□ 1.72
SHROOM3-209ENST00000490690 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
SHROOM3-209ENST00000490690 DEFB132Q7Z7B7 95 aa25.76■■□□□ 1.71
SHROOM3-209ENST00000490690 HEG1Q9ULI3 1381 aa25.76■■□□□ 1.71
SHROOM3-209ENST00000490690 ZNF831Q5JPB2 1677 aa25.75■■□□□ 1.71
SHROOM3-209ENST00000490690 EZH2Q15910 746 aaKnown RBP25.75■■□□□ 1.71
SHROOM3-209ENST00000490690 STARD3NLO95772 234 aa25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 HOXB7P09629 217 aa25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 EIF4A1P60842 406 aaKnown RBP25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 NBPF14Q5TI25 921 aa25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 ZNF496Q96IT1 587 aaPredicted RBP25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 MBIPQ9NS73 344 aa25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 LY75O60449 1722 aa25.74■■□□□ 1.71
SHROOM3-209ENST00000490690 KCPQ6ZWJ8 1503 aa25.73■■□□□ 1.71
SHROOM3-209ENST00000490690 MIS18AQ9NYP9 233 aa25.73■■□□□ 1.71
SHROOM3-209ENST00000490690 KDM3BQ7LBC6 1761 aa25.72■■□□□ 1.71
SHROOM3-209ENST00000490690 SENP3-EIF4A1A0A087X0R7 540 aa25.71■■□□□ 1.71
SHROOM3-209ENST00000490690 UBR2Q8IWV8 1755 aa25.71■■□□□ 1.71
SHROOM3-209ENST00000490690 PROM2Q8N271 834 aa25.7■■□□□ 1.7
SHROOM3-209ENST00000490690 CICQ96RK0 1608 aaPredicted RBP25.7■■□□□ 1.7
SHROOM3-209ENST00000490690 KCNQ3O43525 872 aa25.68■■□□□ 1.7
SHROOM3-209ENST00000490690 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
SHROOM3-209ENST00000490690 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
SHROOM3-209ENST00000490690 FANCIQ9NVI1 1328 aa25.67■■□□□ 1.7
SHROOM3-209ENST00000490690 GIGYF1O75420 1035 aaPredicted RBP25.67■■□□□ 1.7
SHROOM3-209ENST00000490690 LRRC4BQ9NT99 713 aa25.67■■□□□ 1.7
SHROOM3-209ENST00000490690 STK32BQ9NY57 414 aa25.67■■□□□ 1.7
SHROOM3-209ENST00000490690 SLFN5Q08AF3 891 aa25.66■■□□□ 1.7
SHROOM3-209ENST00000490690 AK7Q96M32 723 aa25.66■■□□□ 1.7
SHROOM3-209ENST00000490690 RREB1Q92766 1687 aa25.66■■□□□ 1.7
SHROOM3-209ENST00000490690 ERBB4Q15303 1308 aa25.65■■□□□ 1.7
SHROOM3-209ENST00000490690 NPM2Q86SE8 214 aaKnown RBP25.65■■□□□ 1.7
SHROOM3-209ENST00000490690 DNAJC10Q8IXB1 793 aa25.65■■□□□ 1.7
SHROOM3-209ENST00000490690 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
SHROOM3-209ENST00000490690 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
SHROOM3-209ENST00000490690 ITPK1Q13572 414 aa25.64■■□□□ 1.7
SHROOM3-209ENST00000490690 C5P01031 1676 aa25.64■■□□□ 1.69
SHROOM3-209ENST00000490690 TSR2Q969E8 191 aaKnown RBP25.63■■□□□ 1.69
SHROOM3-209ENST00000490690 CT47B1P0C2W7 299 aaPredicted RBP25.62■■□□□ 1.69
SHROOM3-209ENST00000490690 CYP19A1P11511 503 aaPredicted RBP25.62■■□□□ 1.69
SHROOM3-209ENST00000490690 LINC00116Q8NCU8 138 aa25.62■■□□□ 1.69
SHROOM3-209ENST00000490690 CCDC87Q9NVE4 849 aa25.62■■□□□ 1.69
SHROOM3-209ENST00000490690 DUSP27Q5VZP5 1158 aa25.61■■□□□ 1.69
SHROOM3-209ENST00000490690 ZNF428Q96B54 188 aa25.61■■□□□ 1.69
SHROOM3-209ENST00000490690 ADRA2BP18089 450 aa25.6■■□□□ 1.69
SHROOM3-209ENST00000490690 CRKLP46109 303 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms