RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
SHC1-211ENST00000490667 AK7Q96M32 723 aa17.65■□□□□ 0.42
SHC1-211ENST00000490667 CASZ1Q86V15 1759 aa17.65■□□□□ 0.42
SHC1-211ENST00000490667 ARXQ96QS3 562 aa17.64■□□□□ 0.41
SHC1-211ENST00000490667 LY75O60449 1722 aa17.64■□□□□ 0.41
SHC1-211ENST00000490667 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
SHC1-211ENST00000490667 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHC1-211ENST00000490667 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
SHC1-211ENST00000490667 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
SHC1-211ENST00000490667 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
SHC1-211ENST00000490667 POLD1P28340 1107 aa17.62■□□□□ 0.41
SHC1-211ENST00000490667 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
SHC1-211ENST00000490667 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
SHC1-211ENST00000490667 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
SHC1-211ENST00000490667 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
SHC1-211ENST00000490667 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
SHC1-211ENST00000490667 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
SHC1-211ENST00000490667 FCHSD2O94868 740 aa17.6■□□□□ 0.41
SHC1-211ENST00000490667 PHF14O94880 888 aa17.6■□□□□ 0.41
SHC1-211ENST00000490667 AMIGO3Q86WK7 504 aa17.6■□□□□ 0.41
SHC1-211ENST00000490667 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
SHC1-211ENST00000490667 FHDC1Q9C0D6 1143 aaPredicted RBP17.6■□□□□ 0.41
SHC1-211ENST00000490667 ITGB4P16144 1822 aa17.59■□□□□ 0.41
SHC1-211ENST00000490667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
SHC1-211ENST00000490667 GNAT3A8MTJ3 354 aa17.59■□□□□ 0.41
SHC1-211ENST00000490667 GNPATO15228 680 aa17.59■□□□□ 0.41
SHC1-211ENST00000490667 SSFA2P28290 1259 aa17.59■□□□□ 0.41
SHC1-211ENST00000490667 RALBP1Q15311 655 aa17.58■□□□□ 0.4
SHC1-211ENST00000490667 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
SHC1-211ENST00000490667 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
SHC1-211ENST00000490667 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
SHC1-211ENST00000490667 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
SHC1-211ENST00000490667 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
SHC1-211ENST00000490667 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
SHC1-211ENST00000490667 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
SHC1-211ENST00000490667 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
SHC1-211ENST00000490667 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
SHC1-211ENST00000490667 TEFQ10587 303 aa17.54■□□□□ 0.4
SHC1-211ENST00000490667 KLHL34Q8N239 644 aa17.54■□□□□ 0.4
SHC1-211ENST00000490667 CNTNAP4Q9C0A0 1308 aa17.53■□□□□ 0.4
SHC1-211ENST00000490667 C4BP0C0L5 1744 aa17.53■□□□□ 0.4
SHC1-211ENST00000490667 C5P01031 1676 aa17.53■□□□□ 0.4
SHC1-211ENST00000490667 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.4
SHC1-211ENST00000490667 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
SHC1-211ENST00000490667 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
SHC1-211ENST00000490667 NEFMP07197 916 aa17.51■□□□□ 0.39
SHC1-211ENST00000490667 ADRA2BP18089 450 aa17.51■□□□□ 0.39
SHC1-211ENST00000490667 QSER1Q2KHR3 1735 aa17.51■□□□□ 0.39
SHC1-211ENST00000490667 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
SHC1-211ENST00000490667 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
SHC1-211ENST00000490667 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
SHC1-211ENST00000490667 RFC4P35249 363 aa17.49■□□□□ 0.39
SHC1-211ENST00000490667 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
SHC1-211ENST00000490667 ZNF790Q6PG37 636 aa17.49■□□□□ 0.39
SHC1-211ENST00000490667 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
SHC1-211ENST00000490667 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
SHC1-211ENST00000490667 MRC1P22897 1456 aa17.49■□□□□ 0.39
SHC1-211ENST00000490667 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
SHC1-211ENST00000490667 MCM10Q7L590 875 aa17.48■□□□□ 0.39
SHC1-211ENST00000490667 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
SHC1-211ENST00000490667 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
SHC1-211ENST00000490667 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
SHC1-211ENST00000490667 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
SHC1-211ENST00000490667 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
SHC1-211ENST00000490667 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
SHC1-211ENST00000490667 TUBGCP6Q96RT7 1819 aa17.47■□□□□ 0.39
SHC1-211ENST00000490667 BTBD11A6QL63 1104 aa17.47■□□□□ 0.39
SHC1-211ENST00000490667 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
SHC1-211ENST00000490667 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
SHC1-211ENST00000490667 SCN11AQ9UI33 1791 aa17.46■□□□□ 0.39
SHC1-211ENST00000490667 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
SHC1-211ENST00000490667 CD2APQ9Y5K6 639 aa17.46■□□□□ 0.39
SHC1-211ENST00000490667 GYS1P13807 737 aa17.45■□□□□ 0.38
SHC1-211ENST00000490667 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
SHC1-211ENST00000490667 KCNQ3O43525 872 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 STARD3NLO95772 234 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 MMP10P09238 476 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 GPR162Q16538 588 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 FMNL2Q96PY5 1086 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
SHC1-211ENST00000490667 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
SHC1-211ENST00000490667 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
SHC1-211ENST00000490667 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
SHC1-211ENST00000490667 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
SHC1-211ENST00000490667 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
SHC1-211ENST00000490667 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
SHC1-211ENST00000490667 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
SHC1-211ENST00000490667 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
SHC1-211ENST00000490667 ZBTB1Q9Y2K1 713 aa17.42■□□□□ 0.38
SHC1-211ENST00000490667 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
SHC1-211ENST00000490667 UBR3Q6ZT12 1888 aa17.41■□□□□ 0.38
SHC1-211ENST00000490667 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
SHC1-211ENST00000490667 ZPR1O75312 459 aa17.41■□□□□ 0.38
SHC1-211ENST00000490667 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
SHC1-211ENST00000490667 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
SHC1-211ENST00000490667 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
SHC1-211ENST00000490667 YY1P25490 414 aa17.4■□□□□ 0.38
SHC1-211ENST00000490667 FKBP8Q14318 412 aa17.4■□□□□ 0.38
SHC1-211ENST00000490667 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms