RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SLFNL1Q499Z3 407 aa7.47□□□□□ -1.21
CSTF1-205ENST00000490539 TSEN34Q9BSV6 310 aaKnown RBP7.47□□□□□ -1.21
CSTF1-205ENST00000490539 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
CSTF1-205ENST00000490539 TTBK1Q5TCY1 1321 aaPredicted RBP7.47□□□□□ -1.21
CSTF1-205ENST00000490539 IQGAP2Q13576 1575 aa7.46□□□□□ -1.21
CSTF1-205ENST00000490539 MED1Q15648 1581 aaPredicted RBP7.46□□□□□ -1.21
CSTF1-205ENST00000490539 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
CSTF1-205ENST00000490539 GOLGA3Q08378 1498 aa7.46□□□□□ -1.22
CSTF1-205ENST00000490539 PRXQ9BXM0 1461 aa7.46□□□□□ -1.22
CSTF1-205ENST00000490539 SHROOM2Q13796 1616 aa7.45□□□□□ -1.22
CSTF1-205ENST00000490539 COL17A1Q9UMD9 1497 aaPredicted RBP7.45□□□□□ -1.22
CSTF1-205ENST00000490539 BMP2P12643 396 aa7.45□□□□□ -1.22
CSTF1-205ENST00000490539 C6orf118Q5T5N4 469 aa7.45□□□□□ -1.22
CSTF1-205ENST00000490539 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
CSTF1-205ENST00000490539 TNIKQ9UKE5 1360 aa7.45□□□□□ -1.22
CSTF1-205ENST00000490539 PTPRGP23470 1445 aa7.44□□□□□ -1.22
CSTF1-205ENST00000490539 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
CSTF1-205ENST00000490539 POM121Q96HA1 1249 aa7.44□□□□□ -1.22
CSTF1-205ENST00000490539 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
CSTF1-205ENST00000490539 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
CSTF1-205ENST00000490539 Q6ZVU0 165 aa7.43□□□□□ -1.22
CSTF1-205ENST00000490539 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
CSTF1-205ENST00000490539 ZNF784Q8NCA9 323 aaPredicted RBP7.43□□□□□ -1.22
CSTF1-205ENST00000490539 TMPRSS4Q9NRS4 437 aa7.43□□□□□ -1.22
CSTF1-205ENST00000490539 PCDHB11Q9Y5F2 797 aa7.43□□□□□ -1.22
CSTF1-205ENST00000490539 PTPRMP28827 1452 aa7.43□□□□□ -1.22
CSTF1-205ENST00000490539 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
CSTF1-205ENST00000490539 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
CSTF1-205ENST00000490539 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-205ENST00000490539 CBLBQ13191 982 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 CNTNAP3BQ96NU0 1288 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 CNTNAP3Q9BZ76 1288 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 CYLDQ9NQC7 956 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 UGGT2Q9NYU1 1516 aa7.41□□□□□ -1.22
CSTF1-205ENST00000490539 HSPA2P54652 639 aa7.4□□□□□ -1.22
CSTF1-205ENST00000490539 KRT76Q01546 638 aa7.4□□□□□ -1.22
CSTF1-205ENST00000490539 USP4Q13107 963 aa7.4□□□□□ -1.22
CSTF1-205ENST00000490539 PROSER2Q86WR7 435 aaPredicted RBP7.4□□□□□ -1.22
CSTF1-205ENST00000490539 DOLKQ9UPQ8 538 aa7.4□□□□□ -1.22
CSTF1-205ENST00000490539 GTF3C3Q9Y5Q9 886 aa7.4□□□□□ -1.22
CSTF1-205ENST00000490539 PPRC1Q5VV67 1664 aaKnown RBP7.39□□□□□ -1.23
CSTF1-205ENST00000490539 KIF21BO75037 1637 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 A6NJR5 290 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 ADH1AP07327 375 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 RELBQ01201 579 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 CYP2U1Q7Z449 544 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 CLUAP1Q96AJ1 413 aa7.39□□□□□ -1.23
CSTF1-205ENST00000490539 SOS2Q07890 1332 aaPredicted RBP7.38□□□□□ -1.23
CSTF1-205ENST00000490539 LILRA1O75019 489 aa7.38□□□□□ -1.23
CSTF1-205ENST00000490539 IGHA1P01876 353 aa7.38□□□□□ -1.23
CSTF1-205ENST00000490539 ERVK-9P63128 1117 aa7.38□□□□□ -1.23
CSTF1-205ENST00000490539 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
CSTF1-205ENST00000490539 GPR161Q8N6U8 529 aaKnown RBP7.38□□□□□ -1.23
CSTF1-205ENST00000490539 DNMT3LQ9UJW3 386 aa7.38□□□□□ -1.23
CSTF1-205ENST00000490539 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
CSTF1-205ENST00000490539 UACAQ9BZF9 1416 aa7.37□□□□□ -1.23
CSTF1-205ENST00000490539 AGBL1Q96MI9 1066 aa7.37□□□□□ -1.23
CSTF1-205ENST00000490539 KIAA0556O60303 1618 aa7.37□□□□□ -1.23
CSTF1-205ENST00000490539 DISP1Q96F81 1524 aa7.37□□□□□ -1.23
CSTF1-205ENST00000490539 TTLL8A6PVC2 850 aa7.36□□□□□ -1.23
CSTF1-205ENST00000490539 SPINT1O43278 529 aa7.36□□□□□ -1.23
CSTF1-205ENST00000490539 LZTS3O60299 673 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-205ENST00000490539 ADD1P35611 737 aaKnown RBP7.36□□□□□ -1.23
CSTF1-205ENST00000490539 PTGIRP43119 386 aa7.36□□□□□ -1.23
CSTF1-205ENST00000490539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.236e-7■■■■□ 26.5
CSTF1-205ENST00000490539 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
CSTF1-205ENST00000490539 COL25A1Q9BXS0 654 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-205ENST00000490539 ALG2Q9H553 416 aa7.36□□□□□ -1.23
CSTF1-205ENST00000490539 POLMQ9NP87 494 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-205ENST00000490539 IRS1P35568 1242 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 HDGFL1Q5TGJ6 251 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 ZNF385CQ66K41 422 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-205ENST00000490539 PHTF2Q8N3S3 785 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 NLRP3Q96P20 1036 aa7.35□□□□□ -1.23
CSTF1-205ENST00000490539 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-205ENST00000490539 EFCAB5A4FU69 1503 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 ABCC2Q92887 1545 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 FOXK2Q01167 660 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
CSTF1-205ENST00000490539 UHRF1BP1LA0JNW5 1464 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 IQSEC2Q5JU85 1478 aa7.34□□□□□ -1.23
CSTF1-205ENST00000490539 PLB1Q6P1J6 1458 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 MEN1O00255 615 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 GNRH1P01148 92 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 SKIP12755 728 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 PTSQ03393 145 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 EML3Q32P44 896 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 ESCO1Q5FWF5 840 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
CSTF1-205ENST00000490539 FNBP4Q8N3X1 1017 aaPredicted RBP7.33□□□□□ -1.24
CSTF1-205ENST00000490539 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
CSTF1-205ENST00000490539 CALR3Q96L12 384 aaKnown RBP7.33□□□□□ -1.24
CSTF1-205ENST00000490539 INSM2Q96T92 566 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms