RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
LRRC1-204ENST00000490222 SV2AQ7L0J3 742 aa10.63□□□□□ -0.71
LRRC1-204ENST00000490222 USP17L1Q7RTZ2 530 aa10.63□□□□□ -0.71
LRRC1-204ENST00000490222 TIMMDC1Q9NPL8 285 aa10.63□□□□□ -0.71
LRRC1-204ENST00000490222 CDC14CA4D256 554 aa10.62□□□□□ -0.71
LRRC1-204ENST00000490222 TMEM229AB2RXF0 380 aa10.62□□□□□ -0.71
LRRC1-204ENST00000490222 GNASQ5JWF2 1037 aa10.62□□□□□ -0.71
LRRC1-204ENST00000490222 TMEM214Q6NUQ4 689 aaKnown RBP10.62□□□□□ -0.71
LRRC1-204ENST00000490222 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
LRRC1-204ENST00000490222 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
LRRC1-204ENST00000490222 GMCL1Q96IK5 515 aa10.61□□□□□ -0.71
LRRC1-204ENST00000490222 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
LRRC1-204ENST00000490222 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
LRRC1-204ENST00000490222 SMTNP53814 917 aa10.6□□□□□ -0.71
LRRC1-204ENST00000490222 KRT76Q01546 638 aa10.6□□□□□ -0.71
LRRC1-204ENST00000490222 C4orf17Q53FE4 359 aa10.6□□□□□ -0.71
LRRC1-204ENST00000490222 TRIM50Q86XT4 487 aa10.6□□□□□ -0.71
LRRC1-204ENST00000490222 PHKA2P46019 1235 aa10.59□□□□□ -0.71
LRRC1-204ENST00000490222 PSME1Q06323 249 aa10.59□□□□□ -0.71
LRRC1-204ENST00000490222 RIPOR1Q6ZS17 1223 aa10.59□□□□□ -0.71
LRRC1-204ENST00000490222 RHBDD1Q8TEB9 315 aa10.59□□□□□ -0.71
LRRC1-204ENST00000490222 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
LRRC1-204ENST00000490222 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
LRRC1-204ENST00000490222 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
LRRC1-204ENST00000490222 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
LRRC1-204ENST00000490222 SERTAD1Q9UHV2 236 aa10.59□□□□□ -0.71
LRRC1-204ENST00000490222 F11P03951 625 aa10.58□□□□□ -0.72
LRRC1-204ENST00000490222 STK17AQ9UEE5 414 aa10.58□□□□□ -0.72
LRRC1-204ENST00000490222 A0A1B0GTH6 734 aa10.57□□□□□ -0.72
LRRC1-204ENST00000490222 DBN1Q16643 649 aa10.57□□□□□ -0.72
LRRC1-204ENST00000490222 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
LRRC1-204ENST00000490222 ZSCAN1Q8NBB4 408 aa10.57□□□□□ -0.72
LRRC1-204ENST00000490222 TFIP11Q9UBB9 837 aaKnown RBP10.57□□□□□ -0.72
LRRC1-204ENST00000490222 MAFBQ9Y5Q3 323 aaPredicted RBP10.57□□□□□ -0.72
LRRC1-204ENST00000490222 H7C1W4 665 aa10.56□□□□□ -0.72
LRRC1-204ENST00000490222 MTFR1Q15390 333 aa10.56□□□□□ -0.72
LRRC1-204ENST00000490222 A6NJY4 79 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 CDK2AP1O14519 115 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 BACH1O14867 736 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 ATP1A2P50993 1020 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 CLDN10P78369 228 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 ZNF295-AS1Q8N0V1 137 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 ZNF358Q9NW07 568 aa10.55□□□□□ -0.72
LRRC1-204ENST00000490222 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 PPP1R12CQ9BZL4 782 aa10.54□□□□□ -0.72
LRRC1-204ENST00000490222 GPAMQ9HCL2 828 aa10.54□□□□□ -0.72
LRRC1-204ENST00000490222 MKRN1Q9UHC7 482 aaKnown RBP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
LRRC1-204ENST00000490222 KIAA1024Q9UPX6 916 aa10.54□□□□□ -0.72
LRRC1-204ENST00000490222 PLA2G4AP47712 749 aa10.53□□□□□ -0.72
LRRC1-204ENST00000490222 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
LRRC1-204ENST00000490222 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
LRRC1-204ENST00000490222 DNAAF2Q9NVR5 837 aaKnown RBP10.53□□□□□ -0.72
LRRC1-204ENST00000490222 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
LRRC1-204ENST00000490222 MSX1P28360 303 aa10.52□□□□□ -0.73
LRRC1-204ENST00000490222 GAS6Q14393 721 aa10.52□□□□□ -0.73
LRRC1-204ENST00000490222 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
LRRC1-204ENST00000490222 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
LRRC1-204ENST00000490222 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
LRRC1-204ENST00000490222 GTPBP3Q969Y2 492 aaKnown RBP10.52□□□□□ -0.73
LRRC1-204ENST00000490222 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
LRRC1-204ENST00000490222 THBS1P07996 1170 aa10.51□□□□□ -0.73
LRRC1-204ENST00000490222 EPHA4P54764 986 aa10.51□□□□□ -0.73
LRRC1-204ENST00000490222 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
LRRC1-204ENST00000490222 USP3Q9Y6I4 520 aa10.51□□□□□ -0.73
LRRC1-204ENST00000490222 SIX5Q8N196 739 aa10.5□□□□□ -0.73
LRRC1-204ENST00000490222 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
LRRC1-204ENST00000490222 GPR25O00155 361 aa10.49□□□□□ -0.73
LRRC1-204ENST00000490222 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
LRRC1-204ENST00000490222 FOXK2Q01167 660 aa10.49□□□□□ -0.73
LRRC1-204ENST00000490222 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
LRRC1-204ENST00000490222 PGBD3Q8N328 593 aa10.49□□□□□ -0.73
LRRC1-204ENST00000490222 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 SLURP2P0DP57 97 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 TNS4Q8IZW8 715 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
LRRC1-204ENST00000490222 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 CRISPLD1Q9H336 500 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
LRRC1-204ENST00000490222 M0R2N6 131 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 DKK1O94907 266 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 ATP4AP20648 1035 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 RASA1P20936 1047 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
LRRC1-204ENST00000490222 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
LRRC1-204ENST00000490222 UBAP2LQ14157 1087 aaKnown RBP10.46□□□□□ -0.73
LRRC1-204ENST00000490222 NBPF1Q3BBV0 1214 aa10.46□□□□□ -0.73
LRRC1-204ENST00000490222 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
LRRC1-204ENST00000490222 AIDAQ96BJ3 306 aa10.46□□□□□ -0.73
LRRC1-204ENST00000490222 LMOD1P29536 600 aaPredicted RBP10.45□□□□□ -0.74
LRRC1-204ENST00000490222 SRSF11Q05519 484 aaKnown RBP10.45□□□□□ -0.74
LRRC1-204ENST00000490222 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
LRRC1-204ENST00000490222 MBIPQ9NS73 344 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms