RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 TBC1D2Q9BYX2 928 aa18.61■□□□□ 0.57
COL9A1-208ENST00000489611 MED1Q15648 1581 aaPredicted RBP18.61■□□□□ 0.57
COL9A1-208ENST00000489611 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
COL9A1-208ENST00000489611 CEP85Q6P2H3 762 aa18.61■□□□□ 0.57
COL9A1-208ENST00000489611 HOXB7P09629 217 aa18.59■□□□□ 0.57
COL9A1-208ENST00000489611 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
COL9A1-208ENST00000489611 GNAI3P08754 354 aa18.59■□□□□ 0.57
COL9A1-208ENST00000489611 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.56
COL9A1-208ENST00000489611 CDC45O75419 566 aa18.58■□□□□ 0.56
COL9A1-208ENST00000489611 LMO7Q8WWI1 1683 aa18.58■□□□□ 0.56
COL9A1-208ENST00000489611 SNX21Q969T3 373 aa18.58■□□□□ 0.56
COL9A1-208ENST00000489611 ANTXR1Q9H6X2 564 aa18.58■□□□□ 0.56
COL9A1-208ENST00000489611 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
COL9A1-208ENST00000489611 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
COL9A1-208ENST00000489611 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
COL9A1-208ENST00000489611 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
COL9A1-208ENST00000489611 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
COL9A1-208ENST00000489611 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
COL9A1-208ENST00000489611 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
COL9A1-208ENST00000489611 GNAI2P04899 355 aa18.55■□□□□ 0.56
COL9A1-208ENST00000489611 FLIIQ13045 1269 aa18.55■□□□□ 0.56
COL9A1-208ENST00000489611 MEIS3Q99687 375 aa18.55■□□□□ 0.56
COL9A1-208ENST00000489611 KDM3BQ7LBC6 1761 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 GSE1Q14687 1217 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 CASC1Q6TDU7 716 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
COL9A1-208ENST00000489611 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-208ENST00000489611 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
COL9A1-208ENST00000489611 FKBP5Q13451 457 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-208ENST00000489611 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
COL9A1-208ENST00000489611 CHRNA2Q15822 529 aa18.52■□□□□ 0.56
COL9A1-208ENST00000489611 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
COL9A1-208ENST00000489611 SLC4A10Q6U841 1118 aa18.52■□□□□ 0.56
COL9A1-208ENST00000489611 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
COL9A1-208ENST00000489611 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
COL9A1-208ENST00000489611 NHSL1Q5SYE7 1610 aa18.52■□□□□ 0.55
COL9A1-208ENST00000489611 G2E3Q7L622 706 aa18.51■□□□□ 0.55
COL9A1-208ENST00000489611 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
COL9A1-208ENST00000489611 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
COL9A1-208ENST00000489611 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
COL9A1-208ENST00000489611 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
COL9A1-208ENST00000489611 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
COL9A1-208ENST00000489611 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
COL9A1-208ENST00000489611 HDGFL1Q5TGJ6 251 aa18.49■□□□□ 0.55
COL9A1-208ENST00000489611 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
COL9A1-208ENST00000489611 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
COL9A1-208ENST00000489611 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
COL9A1-208ENST00000489611 F6X3S4 739 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 TEFQ10587 303 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
COL9A1-208ENST00000489611 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 TOM1O60784 492 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
COL9A1-208ENST00000489611 ATP8B2P98198 1209 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
COL9A1-208ENST00000489611 ERBB3P21860 1342 aa18.46■□□□□ 0.55
COL9A1-208ENST00000489611 ABCC6O95255 1503 aa18.46■□□□□ 0.55
COL9A1-208ENST00000489611 CPDO75976 1380 aa18.46■□□□□ 0.55
COL9A1-208ENST00000489611 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-208ENST00000489611 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
COL9A1-208ENST00000489611 REC8O95072 547 aa18.45■□□□□ 0.54
COL9A1-208ENST00000489611 LRRCC1Q9C099 1032 aa18.45■□□□□ 0.54
COL9A1-208ENST00000489611 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
COL9A1-208ENST00000489611 HDAC5Q9UQL6 1122 aa18.45■□□□□ 0.54
COL9A1-208ENST00000489611 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
COL9A1-208ENST00000489611 UBTFL1P0CB47 393 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-208ENST00000489611 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-208ENST00000489611 RGPD5Q99666 1765 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 RABEP1Q15276 862 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 KIF2CQ99661 725 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 AOX1Q06278 1338 aa18.43■□□□□ 0.54
COL9A1-208ENST00000489611 COL18A1P39060 1754 aa18.42■□□□□ 0.54
COL9A1-208ENST00000489611 SDSP20132 328 aa18.42■□□□□ 0.54
COL9A1-208ENST00000489611 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-208ENST00000489611 RAB11FIP3O75154 756 aa18.41■□□□□ 0.54
COL9A1-208ENST00000489611 HSP90AB1P08238 724 aaKnown RBP18.41■□□□□ 0.54
COL9A1-208ENST00000489611 CSB-PGBD3P0DP91 1061 aa18.41■□□□□ 0.54
COL9A1-208ENST00000489611 NLRP2Q9NX02 1062 aa18.41■□□□□ 0.54
COL9A1-208ENST00000489611 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-208ENST00000489611 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
COL9A1-208ENST00000489611 PDE1AP54750 535 aa18.41■□□□□ 0.54
COL9A1-208ENST00000489611 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-208ENST00000489611 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
COL9A1-208ENST00000489611 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
COL9A1-208ENST00000489611 K7ELQ4 463 aaPredicted RBP18.4■□□□□ 0.54
COL9A1-208ENST00000489611 DDIT3P35638 169 aa18.4■□□□□ 0.54
COL9A1-208ENST00000489611 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
COL9A1-208ENST00000489611 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.54
COL9A1-208ENST00000489611 PTMSP20962 102 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 USP26Q9BXU7 913 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 SALL3Q9BXA9 1300 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
COL9A1-208ENST00000489611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms