RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
CNIH3-209ENST00000489556 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
CNIH3-209ENST00000489556 ERVV-2B6SEH9 535 aa11.23□□□□□ -0.61
CNIH3-209ENST00000489556 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
CNIH3-209ENST00000489556 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
CNIH3-209ENST00000489556 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
CNIH3-209ENST00000489556 VIRMAQ69YN4 1812 aaKnown RBP11.22□□□□□ -0.61
CNIH3-209ENST00000489556 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
CNIH3-209ENST00000489556 SLC52A2Q9HAB3 445 aa11.22□□□□□ -0.61
CNIH3-209ENST00000489556 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
CNIH3-209ENST00000489556 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
CNIH3-209ENST00000489556 DOT1LQ8TEK3 1739 aa11.21□□□□□ -0.61
CNIH3-209ENST00000489556 KCNQ2O43526 872 aa11.21□□□□□ -0.61
CNIH3-209ENST00000489556 CCDC27Q2M243 656 aa11.21□□□□□ -0.61
CNIH3-209ENST00000489556 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
CNIH3-209ENST00000489556 APBA3O96018 575 aa11.2□□□□□ -0.62
CNIH3-209ENST00000489556 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
CNIH3-209ENST00000489556 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
CNIH3-209ENST00000489556 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
CNIH3-209ENST00000489556 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
CNIH3-209ENST00000489556 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 GNAI1P63096 354 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 PIGBQ92521 554 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
CNIH3-209ENST00000489556 ITGB4P16144 1822 aa11.19□□□□□ -0.62
CNIH3-209ENST00000489556 SLC39A6Q13433 755 aa11.18□□□□□ -0.62
CNIH3-209ENST00000489556 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
CNIH3-209ENST00000489556 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
CNIH3-209ENST00000489556 SBF2Q86WG5 1849 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
CNIH3-209ENST00000489556 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 IFT57Q9NWB7 429 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 TOGARAM1Q9Y4F4 1720 aa11.17□□□□□ -0.62
CNIH3-209ENST00000489556 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 BAG6P46379 1132 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 NHSQ6T4R5 1651 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 BCL9O00512 1426 aa11.16□□□□□ -0.62
CNIH3-209ENST00000489556 IL16Q14005 1332 aa11.15□□□□□ -0.62
CNIH3-209ENST00000489556 E9PSI1 815 aa11.15□□□□□ -0.62
CNIH3-209ENST00000489556 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
CNIH3-209ENST00000489556 FMNL2Q96PY5 1086 aa11.15□□□□□ -0.62
CNIH3-209ENST00000489556 BABAM1Q9NWV8 329 aa11.15□□□□□ -0.62
CNIH3-209ENST00000489556 BTAF1O14981 1849 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 ZBED9Q6R2W3 1325 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 CHL1O00533 1208 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 KCNQ3O43525 872 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 MBIPQ9NS73 344 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
CNIH3-209ENST00000489556 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
CNIH3-209ENST00000489556 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
CNIH3-209ENST00000489556 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
CNIH3-209ENST00000489556 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
CNIH3-209ENST00000489556 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
CNIH3-209ENST00000489556 ZBTB22O15209 634 aa11.12□□□□□ -0.63
CNIH3-209ENST00000489556 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
CNIH3-209ENST00000489556 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
CNIH3-209ENST00000489556 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
CNIH3-209ENST00000489556 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
CNIH3-209ENST00000489556 SIPA1L3O60292 1781 aaPredicted RBP11.12□□□□□ -0.63
CNIH3-209ENST00000489556 MRC1P22897 1456 aa11.12□□□□□ -0.63
CNIH3-209ENST00000489556 ZNF521Q96K83 1311 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 FANCIQ9NVI1 1328 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 PLSCR1O15162 318 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 SNRPA1P09661 255 aaKnown RBP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 SIK1P57059 783 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 TXNRD1Q16881 649 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 DEFB132Q7Z7B7 95 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
CNIH3-209ENST00000489556 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
CNIH3-209ENST00000489556 STARD3NLO95772 234 aa11.1□□□□□ -0.63
CNIH3-209ENST00000489556 KCNQ4P56696 695 aa11.1□□□□□ -0.63
CNIH3-209ENST00000489556 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
CNIH3-209ENST00000489556 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
CNIH3-209ENST00000489556 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
CNIH3-209ENST00000489556 HEG1Q9ULI3 1381 aa11.09□□□□□ -0.63
CNIH3-209ENST00000489556 TWISTNBQ3B726 338 aaPredicted RBP11.09□□□□□ -0.63
CNIH3-209ENST00000489556 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
CNIH3-209ENST00000489556 DNAJC10Q8IXB1 793 aa11.09□□□□□ -0.63
CNIH3-209ENST00000489556 ARXQ96QS3 562 aa11.09□□□□□ -0.63
CNIH3-209ENST00000489556 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
CNIH3-209ENST00000489556 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
CNIH3-209ENST00000489556 ABCB7O75027 752 aa11.08□□□□□ -0.64
CNIH3-209ENST00000489556 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
CNIH3-209ENST00000489556 KRT24Q2M2I5 525 aa11.08□□□□□ -0.64
CNIH3-209ENST00000489556 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms