RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 HOXB7P09629 217 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 NCAPD2Q15021 1401 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
CSMD2-209ENST00000489419 NCOA3Q9Y6Q9 1424 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 GCP02774 474 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 AMOTQ4VCS5 1084 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
CSMD2-209ENST00000489419 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
CSMD2-209ENST00000489419 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
CSMD2-209ENST00000489419 PLEKHO1Q53GL0 409 aaPredicted RBP10.98□□□□□ -0.65
CSMD2-209ENST00000489419 KIF1AQ12756 1690 aa10.98□□□□□ -0.65
CSMD2-209ENST00000489419 GNAI3P08754 354 aa10.98□□□□□ -0.65
CSMD2-209ENST00000489419 G2E3Q7L622 706 aa10.98□□□□□ -0.65
CSMD2-209ENST00000489419 TBC1D2Q9BYX2 928 aa10.98□□□□□ -0.65
CSMD2-209ENST00000489419 FLIIQ13045 1269 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 AKAP4Q5JQC9 854 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 ORAI2Q96SN7 254 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 MEIS3Q99687 375 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
CSMD2-209ENST00000489419 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 OVOS2A0A0G2JMS6 1433 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 RBM33Q96EV2 1170 aaKnown RBP10.97□□□□□ -0.65
CSMD2-209ENST00000489419 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
CSMD2-209ENST00000489419 GNAI2P04899 355 aa10.96□□□□□ -0.65
CSMD2-209ENST00000489419 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
CSMD2-209ENST00000489419 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
CSMD2-209ENST00000489419 SNX21Q969T3 373 aa10.96□□□□□ -0.65
CSMD2-209ENST00000489419 CDC45O75419 566 aa10.96□□□□□ -0.66
CSMD2-209ENST00000489419 IPO4Q8TEX9 1081 aaKnown RBP10.96□□□□□ -0.66
CSMD2-209ENST00000489419 ANTXR1Q9H6X2 564 aa10.96□□□□□ -0.66
CSMD2-209ENST00000489419 DCCP43146 1447 aa10.96□□□□□ -0.66
CSMD2-209ENST00000489419 TRPM3Q9HCF6 1732 aaPredicted RBP10.96□□□□□ -0.66
CSMD2-209ENST00000489419 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
CSMD2-209ENST00000489419 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
CSMD2-209ENST00000489419 FKBP5Q13451 457 aaPredicted RBP10.95□□□□□ -0.66
CSMD2-209ENST00000489419 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
CSMD2-209ENST00000489419 SLC4A10Q6U841 1118 aa10.95□□□□□ -0.66
CSMD2-209ENST00000489419 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
CSMD2-209ENST00000489419 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
CSMD2-209ENST00000489419 F6X3S4 739 aa10.94□□□□□ -0.66
CSMD2-209ENST00000489419 RRP9O43818 475 aaKnown RBP10.94□□□□□ -0.66
CSMD2-209ENST00000489419 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
CSMD2-209ENST00000489419 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
CSMD2-209ENST00000489419 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
CSMD2-209ENST00000489419 N4BP2Q86UW6 1770 aaPredicted RBP10.94□□□□□ -0.66
CSMD2-209ENST00000489419 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
CSMD2-209ENST00000489419 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
CSMD2-209ENST00000489419 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
CSMD2-209ENST00000489419 TEFQ10587 303 aa10.93□□□□□ -0.66
CSMD2-209ENST00000489419 ZNF530Q6P9A1 599 aaPredicted RBP10.93□□□□□ -0.66
CSMD2-209ENST00000489419 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
CSMD2-209ENST00000489419 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
CSMD2-209ENST00000489419 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
CSMD2-209ENST00000489419 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CSMD2-209ENST00000489419 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
CSMD2-209ENST00000489419 GSPT1P15170 499 aaKnown RBP10.92□□□□□ -0.66
CSMD2-209ENST00000489419 ATF3P18847 181 aa10.92□□□□□ -0.66
CSMD2-209ENST00000489419 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
CSMD2-209ENST00000489419 LGR6Q9HBX8 967 aa10.92□□□□□ -0.66
CSMD2-209ENST00000489419 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
CSMD2-209ENST00000489419 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
CSMD2-209ENST00000489419 CASC1Q6TDU7 716 aa10.91□□□□□ -0.66
CSMD2-209ENST00000489419 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
CSMD2-209ENST00000489419 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
CSMD2-209ENST00000489419 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 FRAT2O75474 233 aaPredicted RBP10.9□□□□□ -0.66
CSMD2-209ENST00000489419 HSP90AA2PQ14568 343 aaPredicted RBP10.9□□□□□ -0.66
CSMD2-209ENST00000489419 CHMP5Q9NZZ3 219 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 ABCC6O95255 1503 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
CSMD2-209ENST00000489419 USP44Q9H0E7 712 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
CSMD2-209ENST00000489419 RGPD2P0DJD1 1756 aa10.9□□□□□ -0.67
CSMD2-209ENST00000489419 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-209ENST00000489419 GSE1Q14687 1217 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 KIF2CQ99661 725 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 SRCIN1Q9C0H9 1055 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-209ENST00000489419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSMD2-209ENST00000489419 UBTFL1P0CB47 393 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-209ENST00000489419 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 HDAC5Q9UQL6 1122 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 ERBB3P21860 1342 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 TMEM94Q12767 1356 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 ADAMTS7Q9UKP4 1686 aa10.89□□□□□ -0.67
CSMD2-209ENST00000489419 SDSP20132 328 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 PDE1AP54750 535 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
CSMD2-209ENST00000489419 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-209ENST00000489419 DBF4Q9UBU7 674 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms