RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 AXIN2Q9Y2T1 843 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 MON2Q7Z3U7 1717 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 TNS2Q63HR2 1409 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 ERBB3P21860 1342 aa7□□□□□ -1.29
PRDM1-207ENST00000489365 A0A1W2PP64 1363 aa6.99□□□□□ -1.29
PRDM1-207ENST00000489365 LRRC37A3O60309 1634 aa6.99□□□□□ -1.29
PRDM1-207ENST00000489365 NFAT5O94916 1531 aa6.99□□□□□ -1.29
PRDM1-207ENST00000489365 BCL9O00512 1426 aa6.99□□□□□ -1.29
PRDM1-207ENST00000489365 ANKRD36BQ8N2N9 1353 aa6.98□□□□□ -1.29
PRDM1-207ENST00000489365 USP47Q96K76 1375 aa6.98□□□□□ -1.29
PRDM1-207ENST00000489365 KCNQ2O43526 872 aa6.98□□□□□ -1.29
PRDM1-207ENST00000489365 MARCH10Q8NA82 808 aaPredicted RBP6.98□□□□□ -1.29
PRDM1-207ENST00000489365 LTV1Q96GA3 475 aaPredicted RBP6.98□□□□□ -1.29
PRDM1-207ENST00000489365 FAM163AQ96GL9 167 aaPredicted RBP6.98□□□□□ -1.29
PRDM1-207ENST00000489365 TIMELESSQ9UNS1 1208 aa6.98□□□□□ -1.29
PRDM1-207ENST00000489365 RGPD3A6NKT7 1758 aaPredicted RBP6.97□□□□□ -1.29
PRDM1-207ENST00000489365 RGPD4Q7Z3J3 1758 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 DDX54Q8TDD1 881 aaKnown RBP6.97□□□□□ -1.29
PRDM1-207ENST00000489365 RAPGEF4Q8WZA2 1011 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 IP6K1Q92551 441 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
PRDM1-207ENST00000489365 CRISPLD2Q9H0B8 497 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 CGNL1Q0VF96 1302 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 WNK3Q9BYP7 1800 aa6.97□□□□□ -1.29
PRDM1-207ENST00000489365 RREB1Q92766 1687 aa6.96□□□□□ -1.29
PRDM1-207ENST00000489365 RTL1A6NKG5 1358 aa6.96□□□□□ -1.29
PRDM1-207ENST00000489365 KAT6BQ8WYB5 2073 aa6.96□□□□□ -1.29
PRDM1-207ENST00000489365 LTN1O94822 1766 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 COL18A1P39060 1754 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 PDE4AP27815 886 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 TXNRD1Q16881 649 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 PCGF6Q9BYE7 350 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 FAM208AQ9UK61 1670 aaKnown RBP6.96□□□□□ -1.3
PRDM1-207ENST00000489365 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.3
PRDM1-207ENST00000489365 RGPD5Q99666 1765 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 SLC27A3Q5K4L6 730 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 TESK2Q96S53 571 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 POLR3GLQ9BT43 218 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 CD163L1Q9NR16 1453 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 USP54Q70EL1 1684 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 PEAK1Q9H792 1746 aa6.95□□□□□ -1.3
PRDM1-207ENST00000489365 ZBTB7AO95365 584 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 TATP17735 454 aaPredicted RBP6.94□□□□□ -1.3
PRDM1-207ENST00000489365 POLD1P28340 1107 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 HOXC9P31274 260 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 SLC15A2Q16348 729 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 TMEM92Q6UXU6 159 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 ZCRB1Q8TBF4 217 aaKnown RBP6.94□□□□□ -1.3
PRDM1-207ENST00000489365 GPHNQ9NQX3 736 aaPredicted RBP6.94□□□□□ -1.3
PRDM1-207ENST00000489365 MAP3K19Q56UN5 1328 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 SBF2Q86WG5 1849 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 KIF24Q5T7B8 1368 aa6.94□□□□□ -1.3
PRDM1-207ENST00000489365 KIF3CO14782 793 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 PPM1GO15355 546 aaPredicted RBP6.93□□□□□ -1.3
PRDM1-207ENST00000489365 YY1P25490 414 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 MFSD10Q14728 455 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 C3orf67Q6ZVT6 689 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
PRDM1-207ENST00000489365 LARP6Q9BRS8 491 aaKnown RBP6.93□□□□□ -1.3
PRDM1-207ENST00000489365 GGNBP2Q9H3C7 697 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 TFCP2L1Q9NZI6 479 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 PCDH11XQ9BZA7 1347 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 PCDH11YQ9BZA8 1340 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 NHSQ6T4R5 1651 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 FLT4P35916 1363 aa6.93□□□□□ -1.3
PRDM1-207ENST00000489365 C2orf72A6NCS6 295 aa6.92□□□□□ -1.3
PRDM1-207ENST00000489365 RRS1Q15050 365 aaKnown RBP6.92□□□□□ -1.3
PRDM1-207ENST00000489365 TMC2Q8TDI7 906 aa6.92□□□□□ -1.3
PRDM1-207ENST00000489365 ANO8Q9HCE9 1232 aaPredicted RBP6.92□□□□□ -1.3
PRDM1-207ENST00000489365 FYB1O15117 783 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 PRIM1P49642 420 aaKnown RBP6.91□□□□□ -1.3
PRDM1-207ENST00000489365 EIF4G2P78344 907 aaKnown RBP eCLIP6.91□□□□□ -1.3
PRDM1-207ENST00000489365 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 ARXQ96QS3 562 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 WDR70Q9NW82 654 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.91□□□□□ -1.3
PRDM1-207ENST00000489365 CCNL1Q9UK58 526 aaPredicted RBP6.91□□□□□ -1.3
PRDM1-207ENST00000489365 SPG7Q9UQ90 795 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 INSRP06213 1382 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 NSD3Q9BZ95 1437 aa6.91□□□□□ -1.3
PRDM1-207ENST00000489365 PTF1AQ7RTS3 328 aa6.9□□□□□ -1.3
PRDM1-207ENST00000489365 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.3
PRDM1-207ENST00000489365 DDX27Q96GQ7 796 aaKnown RBP6.9□□□□□ -1.3
PRDM1-207ENST00000489365 BTAF1O14981 1849 aa6.9□□□□□ -1.31
PRDM1-207ENST00000489365 KIF20BQ96Q89 1820 aa6.9□□□□□ -1.31
PRDM1-207ENST00000489365 FOXK1P85037 733 aa6.89□□□□□ -1.31
PRDM1-207ENST00000489365 DSG2Q14126 1118 aa6.89□□□□□ -1.31
PRDM1-207ENST00000489365 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
PRDM1-207ENST00000489365 GPR162Q16538 588 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 PPP1R15BQ5SWA1 713 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 MPRIPQ6WCQ1 1025 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 AK7Q96M32 723 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
PRDM1-207ENST00000489365 FHDC1Q9C0D6 1143 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms