RNA–Protein interactions for RNA: ENST00000489253.1

SNRPD2P1-201, Transcript of small nuclear ribonucleoprotein D2 pseudogene 1, humanhuman

BASIC

Gene SNRPD2P1, Length 354 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2P1-201ENST00000489253 TSPYL4Q9UJ04 414 aa10.45□□□□□ -0.74
SNRPD2P1-201ENST00000489253 VIRMAQ69YN4 1812 aaKnown RBP10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 PAPPAQ13219 1627 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 IL16Q14005 1332 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 BTBD11A6QL63 1104 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SLC39A6Q13433 755 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
SNRPD2P1-201ENST00000489253 PALLDQ8WX93 1383 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 FANCIQ9NVI1 1328 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 BTAF1O14981 1849 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ITGB4P16144 1822 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 GNAI1P63096 354 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 TTC5Q8N0Z6 440 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 TSR2Q969E8 191 aaKnown RBP10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 MYH16Q9H6N6 1097 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 MBIPQ9NS73 344 aa10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 TNS1Q9HBL0 1735 aaKnown RBP10.43□□□□□ -0.74
SNRPD2P1-201ENST00000489253 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 E9PSI1 815 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 KCNQ3O43525 872 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ASAP1Q9ULH1 1129 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SBF2Q86WG5 1849 aa10.42□□□□□ -0.74
SNRPD2P1-201ENST00000489253 PTCD1O75127 700 aaKnown RBP10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ZNF853P0CG23 659 aa10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ZNF790Q6PG37 636 aa10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ILDR2Q71H61 639 aa10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 ATG3Q9NT62 314 aa10.41□□□□□ -0.74
SNRPD2P1-201ENST00000489253 CHL1O00533 1208 aa10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 APBA3O96018 575 aa10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SLFN5Q08AF3 891 aa10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.74
SNRPD2P1-201ENST00000489253 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
SNRPD2P1-201ENST00000489253 KRT24Q2M2I5 525 aa10.39□□□□□ -0.75
SNRPD2P1-201ENST00000489253 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
SNRPD2P1-201ENST00000489253 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
SNRPD2P1-201ENST00000489253 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
SNRPD2P1-201ENST00000489253 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
SNRPD2P1-201ENST00000489253 HEG1Q9ULI3 1381 aa10.38□□□□□ -0.75
SNRPD2P1-201ENST00000489253 C5P01031 1676 aa10.38□□□□□ -0.75
SNRPD2P1-201ENST00000489253 LOC102724428A0A0B4J2F2 783 aa10.37□□□□□ -0.75
SNRPD2P1-201ENST00000489253 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
SNRPD2P1-201ENST00000489253 SIK1P57059 783 aa10.37□□□□□ -0.75
SNRPD2P1-201ENST00000489253 EXOSC9Q06265 439 aaKnown RBP10.37□□□□□ -0.75
SNRPD2P1-201ENST00000489253 CCNL1Q9UK58 526 aaPredicted RBP10.37□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TJP1Q07157 1748 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 PRAMEF22A3QJZ6 481 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 ATP6V1AP38606 617 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 BAG6P46379 1132 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 KCNQ4P56696 695 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 C8orf58Q8NAV2 365 aa10.36□□□□□ -0.75
SNRPD2P1-201ENST00000489253 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 RGPD3A6NKT7 1758 aaPredicted RBP10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 RGPD4Q7Z3J3 1758 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 SNRPA1P09661 255 aaKnown RBP10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 DNAJC10Q8IXB1 793 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TRMT2AQ8IZ69 625 aaKnown RBP10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TSPYL6Q8N831 410 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 LY75O60449 1722 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 KAT6BQ8WYB5 2073 aa10.35□□□□□ -0.75
SNRPD2P1-201ENST00000489253 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 GIGYF1O75420 1035 aaPredicted RBP10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 ITPK1Q13572 414 aa10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TXNRD1Q16881 649 aa10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNRPD2P1-201ENST00000489253 TCERG1O14776 1098 aaKnown RBP10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 PLSCR1O15162 318 aa10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 EZH2Q15910 746 aaKnown RBP10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 SLC27A3Q5K4L6 730 aa10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 LINC00116Q8NCU8 138 aa10.33□□□□□ -0.76
SNRPD2P1-201ENST00000489253 EP400Q96L91 3159 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 ZNF831Q5JPB2 1677 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 RREB1Q92766 1687 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 HOXB7P09629 217 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 PIP4K2AP48426 406 aaPredicted RBP10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 LRRC4BQ9NT99 713 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 USP16Q9Y5T5 823 aa10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
SNRPD2P1-201ENST00000489253 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms