RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 IP6K1Q92551 441 aa24.2■■□□□ 1.46
SYNGR1-207ENST00000489206 SDSP20132 328 aa24.18■■□□□ 1.46
SYNGR1-207ENST00000489206 BRPF3Q9ULD4 1205 aa24.18■■□□□ 1.46
SYNGR1-207ENST00000489206 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
SYNGR1-207ENST00000489206 FKBP5Q13451 457 aaPredicted RBP24.18■■□□□ 1.46
SYNGR1-207ENST00000489206 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
SYNGR1-207ENST00000489206 SMARCA5O60264 1052 aaPredicted RBP24.17■■□□□ 1.46
SYNGR1-207ENST00000489206 PTMSP20962 102 aa24.17■■□□□ 1.46
SYNGR1-207ENST00000489206 USP26Q9BXU7 913 aa24.17■■□□□ 1.46
SYNGR1-207ENST00000489206 RAB3GAP1Q15042 981 aa24.16■■□□□ 1.46
SYNGR1-207ENST00000489206 CHMP4AQ9BY43 222 aa24.16■■□□□ 1.46
SYNGR1-207ENST00000489206 KCNH5Q8NCM2 988 aa24.16■■□□□ 1.46
SYNGR1-207ENST00000489206 HSP90AA1P07900 732 aaKnown RBP24.15■■□□□ 1.46
SYNGR1-207ENST00000489206 GBP4Q96PP9 640 aa24.15■■□□□ 1.46
SYNGR1-207ENST00000489206 TRAK2O60296 914 aa24.14■■□□□ 1.46
SYNGR1-207ENST00000489206 REC8O95072 547 aa24.14■■□□□ 1.46
SYNGR1-207ENST00000489206 CD2BP2O95400 341 aaKnown RBP24.14■■□□□ 1.46
SYNGR1-207ENST00000489206 LTV1Q96GA3 475 aaPredicted RBP24.14■■□□□ 1.46
SYNGR1-207ENST00000489206 C14orf37Q86TY3 774 aa24.14■■□□□ 1.45
SYNGR1-207ENST00000489206 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.45
SYNGR1-207ENST00000489206 HOXB7P09629 217 aa24.13■■□□□ 1.45
SYNGR1-207ENST00000489206 ATP8B2P98198 1209 aa24.13■■□□□ 1.45
SYNGR1-207ENST00000489206 PDE1AP54750 535 aa24.12■■□□□ 1.45
SYNGR1-207ENST00000489206 TNPO1Q92973 898 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-207ENST00000489206 APBB1O00213 710 aa24.12■■□□□ 1.45
SYNGR1-207ENST00000489206 RBM42Q9BTD8 480 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-207ENST00000489206 SALL3Q9BXA9 1300 aa24.12■■□□□ 1.45
SYNGR1-207ENST00000489206 LRRCC1Q9C099 1032 aa24.11■■□□□ 1.45
SYNGR1-207ENST00000489206 SLIT3O75094 1523 aa24.11■■□□□ 1.45
SYNGR1-207ENST00000489206 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
SYNGR1-207ENST00000489206 ERC2O15083 957 aa24.1■■□□□ 1.45
SYNGR1-207ENST00000489206 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
SYNGR1-207ENST00000489206 NCAPD2Q15021 1401 aa24.1■■□□□ 1.45
SYNGR1-207ENST00000489206 FSD2A1L4K1 749 aa24.09■■□□□ 1.45
SYNGR1-207ENST00000489206 CAMTA1Q9Y6Y1 1673 aa24.09■■□□□ 1.45
SYNGR1-207ENST00000489206 OVOS2A0A0G2JMS6 1433 aa24.09■■□□□ 1.45
SYNGR1-207ENST00000489206 PSME1Q06323 249 aa24.09■■□□□ 1.45
SYNGR1-207ENST00000489206 GOLGA6L3A6NEY3 463 aa24.08■■□□□ 1.45
SYNGR1-207ENST00000489206 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
SYNGR1-207ENST00000489206 SKOR2Q2VWA4 1001 aaPredicted RBP24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 SRCIN1Q9C0H9 1055 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 ISY1Q9ULR0 285 aaKnown RBP24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 EXOC6BQ9Y2D4 811 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 CLEC17AQ6ZS10 378 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 AOX1Q06278 1338 aa24.07■■□□□ 1.44
SYNGR1-207ENST00000489206 ESCO1Q5FWF5 840 aa24.06■■□□□ 1.44
SYNGR1-207ENST00000489206 NECTIN2Q92692 538 aa24.06■■□□□ 1.44
SYNGR1-207ENST00000489206 ST18O60284 1047 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 UBTFL1P0CB47 393 aaPredicted RBP24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 STAP2Q9UGK3 403 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 NPHP4O75161 1426 aaPredicted RBP24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 TRPM3Q9HCF6 1732 aaPredicted RBP24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 PNMA6EA0A0J9YXQ4 647 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 MX1P20591 662 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 EIF4A1P60842 406 aaKnown RBP24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 AKAP4Q5JQC9 854 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 USP44Q9H0E7 712 aa24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 LRRFIP2Q9Y608 721 aaKnown RBP24.05■■□□□ 1.44
SYNGR1-207ENST00000489206 AMOTQ4VCS5 1084 aa24.03■■□□□ 1.44
SYNGR1-207ENST00000489206 PLEKHO1Q53GL0 409 aaPredicted RBP24.03■■□□□ 1.44
SYNGR1-207ENST00000489206 AK9Q5TCS8 1911 aa24.03■■□□□ 1.44
SYNGR1-207ENST00000489206 SSH3Q8TE77 659 aa24.03■■□□□ 1.44
SYNGR1-207ENST00000489206 RAB11FIP3O75154 756 aa24.02■■□□□ 1.43
SYNGR1-207ENST00000489206 SIPA1L3O60292 1781 aaPredicted RBP24.01■■□□□ 1.43
SYNGR1-207ENST00000489206 NUCB2P80303 420 aa24.01■■□□□ 1.43
SYNGR1-207ENST00000489206 CWC22Q9HCG8 908 aaKnown RBP24.01■■□□□ 1.43
SYNGR1-207ENST00000489206 GOLGA6L22H0YM25 854 aa24■■□□□ 1.43
SYNGR1-207ENST00000489206 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
SYNGR1-207ENST00000489206 TEFQ10587 303 aa24■■□□□ 1.43
SYNGR1-207ENST00000489206 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
SYNGR1-207ENST00000489206 GZF1Q9H116 711 aaPredicted RBP24■■□□□ 1.43
SYNGR1-207ENST00000489206 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
SYNGR1-207ENST00000489206 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
SYNGR1-207ENST00000489206 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
SYNGR1-207ENST00000489206 ESYT1Q9BSJ8 1104 aa23.99■■□□□ 1.43
SYNGR1-207ENST00000489206 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
SYNGR1-207ENST00000489206 POLA2Q14181 598 aa23.98■■□□□ 1.43
SYNGR1-207ENST00000489206 EPB41L2O43491 1005 aaKnown RBP23.98■■□□□ 1.43
SYNGR1-207ENST00000489206 MRE11P49959 708 aa23.98■■□□□ 1.43
SYNGR1-207ENST00000489206 MST1RQ04912 1400 aa23.97■■□□□ 1.43
SYNGR1-207ENST00000489206 GCP02774 474 aa23.97■■□□□ 1.43
SYNGR1-207ENST00000489206 MCCP23508 829 aa23.97■■□□□ 1.43
SYNGR1-207ENST00000489206 SSFA2P28290 1259 aa23.97■■□□□ 1.43
SYNGR1-207ENST00000489206 FAM43AQ8N2R8 423 aa23.97■■□□□ 1.43
SYNGR1-207ENST00000489206 DNAAF4Q8WXU2 420 aa23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 RTN4Q9NQC3 1192 aaKnown RBP23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 BTBD11A6QL63 1104 aa23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 XRCC6P12956 609 aaKnown RBP eCLIP23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 MCM2P49736 904 aa23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 ANAPC15P60006 121 aa23.96■■□□□ 1.43
SYNGR1-207ENST00000489206 EIF2S2P20042 333 aaKnown RBP23.95■■□□□ 1.42
SYNGR1-207ENST00000489206 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
SYNGR1-207ENST00000489206 CHPF2Q9P2E5 772 aa23.95■■□□□ 1.42
SYNGR1-207ENST00000489206 PXDNQ92626 1479 aa23.95■■□□□ 1.42
SYNGR1-207ENST00000489206 RNMTO43148 476 aaKnown RBP23.94■■□□□ 1.42
SYNGR1-207ENST00000489206 CYP2E1P05181 493 aaPredicted RBP23.94■■□□□ 1.42
SYNGR1-207ENST00000489206 CHMLP26374 656 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms