RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
USP11-211ENST00000489111 MS4A1P11836 297 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 VPS72Q15906 364 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
USP11-211ENST00000489111 USP21Q9UK80 565 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 MRC1P22897 1456 aa12.83□□□□□ -0.36
USP11-211ENST00000489111 EXOC5O00471 708 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
USP11-211ENST00000489111 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
USP11-211ENST00000489111 CHMP4AQ9BY43 222 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
USP11-211ENST00000489111 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 HOXB7P09629 217 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 EIF4A1P60842 406 aaKnown RBP12.81□□□□□ -0.36
USP11-211ENST00000489111 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 TTC5Q8N0Z6 440 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 CRBNQ96SW2 442 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
USP11-211ENST00000489111 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
USP11-211ENST00000489111 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
USP11-211ENST00000489111 DDB1Q16531 1140 aa12.8□□□□□ -0.36
USP11-211ENST00000489111 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
USP11-211ENST00000489111 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
USP11-211ENST00000489111 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
USP11-211ENST00000489111 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
USP11-211ENST00000489111 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
USP11-211ENST00000489111 AFF2P51816 1311 aa12.8□□□□□ -0.36
USP11-211ENST00000489111 A0A0G2JS52 829 aa12.79□□□□□ -0.36
USP11-211ENST00000489111 MYT1Q01538 1121 aa12.79□□□□□ -0.36
USP11-211ENST00000489111 HDGFL1Q5TGJ6 251 aa12.79□□□□□ -0.36
USP11-211ENST00000489111 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
USP11-211ENST00000489111 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
USP11-211ENST00000489111 KCNQ3O43525 872 aa12.78□□□□□ -0.36
USP11-211ENST00000489111 TRIM27P14373 513 aa12.78□□□□□ -0.36
USP11-211ENST00000489111 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
USP11-211ENST00000489111 DZIP1LQ8IYY4 767 aaKnown RBP12.78□□□□□ -0.36
USP11-211ENST00000489111 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
USP11-211ENST00000489111 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
USP11-211ENST00000489111 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
USP11-211ENST00000489111 ARHGAP45Q92619 1136 aa12.77□□□□□ -0.37
USP11-211ENST00000489111 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
USP11-211ENST00000489111 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 PTPRCP08575 1304 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
USP11-211ENST00000489111 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
USP11-211ENST00000489111 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
USP11-211ENST00000489111 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
USP11-211ENST00000489111 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
USP11-211ENST00000489111 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
USP11-211ENST00000489111 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
USP11-211ENST00000489111 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
USP11-211ENST00000489111 ATRNO75882 1429 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 RLBP1P12271 317 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
USP11-211ENST00000489111 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
USP11-211ENST00000489111 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
USP11-211ENST00000489111 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
USP11-211ENST00000489111 AAMPQ13685 434 aa12.73□□□□□ -0.37
USP11-211ENST00000489111 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
USP11-211ENST00000489111 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
USP11-211ENST00000489111 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
USP11-211ENST00000489111 SIPA1L3O60292 1781 aaPredicted RBP12.73□□□□□ -0.37
USP11-211ENST00000489111 ABCC4O15439 1325 aa12.72□□□□□ -0.37
USP11-211ENST00000489111 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
USP11-211ENST00000489111 CHPF2Q9P2E5 772 aa12.72□□□□□ -0.37
USP11-211ENST00000489111 DBF4Q9UBU7 674 aaPredicted RBP12.72□□□□□ -0.37
USP11-211ENST00000489111 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
USP11-211ENST00000489111 FLIIQ13045 1269 aa12.71□□□□□ -0.37
USP11-211ENST00000489111 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
USP11-211ENST00000489111 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
USP11-211ENST00000489111 FBXO41Q8TF61 875 aa12.71□□□□□ -0.37
USP11-211ENST00000489111 PIGBQ92521 554 aa12.71□□□□□ -0.37
USP11-211ENST00000489111 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.37
USP11-211ENST00000489111 BCL9O00512 1426 aa12.71□□□□□ -0.38
USP11-211ENST00000489111 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
USP11-211ENST00000489111 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
USP11-211ENST00000489111 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
USP11-211ENST00000489111 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
USP11-211ENST00000489111 TOGARAM1Q9Y4F4 1720 aa12.7□□□□□ -0.38
USP11-211ENST00000489111 KCPQ6ZWJ8 1503 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
USP11-211ENST00000489111 G2E3Q7L622 706 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 RGS12O14924 1447 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 GLI3P10071 1580 aa12.69□□□□□ -0.38
USP11-211ENST00000489111 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms