RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
SNU13-208ENST00000488571 AMIGO3Q86WK7 504 aa15.86■□□□□ 0.13
SNU13-208ENST00000488571 MAP2P11137 1827 aaKnown RBP15.86■□□□□ 0.13
SNU13-208ENST00000488571 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
SNU13-208ENST00000488571 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
SNU13-208ENST00000488571 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
SNU13-208ENST00000488571 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
SNU13-208ENST00000488571 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
SNU13-208ENST00000488571 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
SNU13-208ENST00000488571 CDCA8Q53HL2 280 aa15.83■□□□□ 0.12
SNU13-208ENST00000488571 PIGBQ92521 554 aa15.83■□□□□ 0.12
SNU13-208ENST00000488571 CD2APQ9Y5K6 639 aa15.83■□□□□ 0.12
SNU13-208ENST00000488571 SMIM5Q71RC9 77 aa15.82■□□□□ 0.12
SNU13-208ENST00000488571 SMARCC1Q92922 1105 aaPredicted RBP15.82■□□□□ 0.12
SNU13-208ENST00000488571 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
SNU13-208ENST00000488571 ATP10DQ9P241 1426 aa15.81■□□□□ 0.12
SNU13-208ENST00000488571 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
SNU13-208ENST00000488571 AK7Q96M32 723 aa15.8■□□□□ 0.12
SNU13-208ENST00000488571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
SNU13-208ENST00000488571 PHF14O94880 888 aa15.79■□□□□ 0.12
SNU13-208ENST00000488571 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
SNU13-208ENST00000488571 EYA1Q99502 592 aa15.79■□□□□ 0.12
SNU13-208ENST00000488571 ADCY9O60503 1353 aa15.78■□□□□ 0.12
SNU13-208ENST00000488571 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
SNU13-208ENST00000488571 PRR29P0C7W0 189 aa15.78■□□□□ 0.12
SNU13-208ENST00000488571 SPG7Q9UQ90 795 aa15.78■□□□□ 0.12
SNU13-208ENST00000488571 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.12
SNU13-208ENST00000488571 SIK1P57059 783 aa15.77■□□□□ 0.12
SNU13-208ENST00000488571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNU13-208ENST00000488571 POLKQ9UBT6 870 aa15.77■□□□□ 0.12
SNU13-208ENST00000488571 CEP350Q5VT06 3117 aa15.77■□□□□ 0.11
SNU13-208ENST00000488571 SSFA2P28290 1259 aa15.76■□□□□ 0.11
SNU13-208ENST00000488571 ITPK1Q13572 414 aa15.76■□□□□ 0.11
SNU13-208ENST00000488571 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
SNU13-208ENST00000488571 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
SNU13-208ENST00000488571 PHKG2P15735 406 aa15.75■□□□□ 0.11
SNU13-208ENST00000488571 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
SNU13-208ENST00000488571 WWC3Q9ULE0 1092 aa15.74■□□□□ 0.11
SNU13-208ENST00000488571 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
SNU13-208ENST00000488571 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
SNU13-208ENST00000488571 GNPATO15228 680 aa15.73■□□□□ 0.11
SNU13-208ENST00000488571 IFNL2Q8IZJ0 200 aa15.73■□□□□ 0.11
SNU13-208ENST00000488571 KDRP35968 1356 aa15.73■□□□□ 0.11
SNU13-208ENST00000488571 ATP6V1AP38606 617 aa15.72■□□□□ 0.11
SNU13-208ENST00000488571 EIF4A2Q14240 407 aaKnown RBP15.72■□□□□ 0.11
SNU13-208ENST00000488571 GPBP1L1Q9HC44 474 aaPredicted RBP15.72■□□□□ 0.11
SNU13-208ENST00000488571 ATG3Q9NT62 314 aa15.72■□□□□ 0.11
SNU13-208ENST00000488571 ZNF831Q5JPB2 1677 aa15.72■□□□□ 0.11
SNU13-208ENST00000488571 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
SNU13-208ENST00000488571 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
SNU13-208ENST00000488571 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.11
SNU13-208ENST00000488571 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
SNU13-208ENST00000488571 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
SNU13-208ENST00000488571 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
SNU13-208ENST00000488571 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
SNU13-208ENST00000488571 ZNF526Q8TF50 670 aaPredicted RBP15.69■□□□□ 0.1
SNU13-208ENST00000488571 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
SNU13-208ENST00000488571 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
SNU13-208ENST00000488571 MMP10P09238 476 aa15.68■□□□□ 0.1
SNU13-208ENST00000488571 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
SNU13-208ENST00000488571 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
SNU13-208ENST00000488571 EVX2Q03828 476 aa15.67■□□□□ 0.1
SNU13-208ENST00000488571 C4AP0C0L4 1744 aa15.67■□□□□ 0.1
SNU13-208ENST00000488571 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
SNU13-208ENST00000488571 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
SNU13-208ENST00000488571 ERVV-2B6SEH9 535 aa15.66■□□□□ 0.1
SNU13-208ENST00000488571 C10orf71Q711Q0 1435 aa15.66■□□□□ 0.1
SNU13-208ENST00000488571 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
SNU13-208ENST00000488571 HSPA6P17066 643 aa15.65■□□□□ 0.1
SNU13-208ENST00000488571 TRAPPC3LQ5T215 181 aa15.65■□□□□ 0.1
SNU13-208ENST00000488571 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
SNU13-208ENST00000488571 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
SNU13-208ENST00000488571 POLR3GLQ9BT43 218 aa15.65■□□□□ 0.1
SNU13-208ENST00000488571 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
SNU13-208ENST00000488571 KIF3CO14782 793 aa15.64■□□□□ 0.09
SNU13-208ENST00000488571 ARHGEF1Q92888 912 aaKnown RBP15.64■□□□□ 0.09
SNU13-208ENST00000488571 CNTNAP4Q9C0A0 1308 aa15.64■□□□□ 0.09
SNU13-208ENST00000488571 HSP90AB1P08238 724 aaKnown RBP15.63■□□□□ 0.09
SNU13-208ENST00000488571 GYS1P13807 737 aa15.63■□□□□ 0.09
SNU13-208ENST00000488571 TGFB2P61812 414 aa15.63■□□□□ 0.09
SNU13-208ENST00000488571 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
SNU13-208ENST00000488571 NLGN1Q8N2Q7 840 aa15.63■□□□□ 0.09
SNU13-208ENST00000488571 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
SNU13-208ENST00000488571 RPS6KA4O75676 772 aa15.62■□□□□ 0.09
SNU13-208ENST00000488571 PLEKHO1Q53GL0 409 aaPredicted RBP15.62■□□□□ 0.09
SNU13-208ENST00000488571 ZNF530Q6P9A1 599 aaPredicted RBP15.62■□□□□ 0.09
SNU13-208ENST00000488571 AEBP1Q8IUX7 1158 aa15.62■□□□□ 0.09
SNU13-208ENST00000488571 TJP1Q07157 1748 aa15.62■□□□□ 0.09
SNU13-208ENST00000488571 CABP4P57796 275 aa15.61■□□□□ 0.09
SNU13-208ENST00000488571 PANK3Q9H999 370 aa15.61■□□□□ 0.09
SNU13-208ENST00000488571 BCS1LQ9Y276 419 aa15.61■□□□□ 0.09
SNU13-208ENST00000488571 DPEP1P16444 411 aa15.6■□□□□ 0.09
SNU13-208ENST00000488571 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
SNU13-208ENST00000488571 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
SNU13-208ENST00000488571 ADAMTS7Q9UKP4 1686 aa15.6■□□□□ 0.09
SNU13-208ENST00000488571 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SNU13-208ENST00000488571 ARFGEF1Q9Y6D6 1849 aa15.59■□□□□ 0.09
SNU13-208ENST00000488571 HSPA5P11021 654 aaKnown RBP15.59■□□□□ 0.09
SNU13-208ENST00000488571 KCNA3P22001 575 aa15.59■□□□□ 0.09
SNU13-208ENST00000488571 RFC4P35249 363 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms