RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 STRN4Q9NRL3 753 aa25.66■■□□□ 1.7
NECAB3-213ENST00000488489 PLEKHG2Q9H7P9 1386 aa25.66■■□□□ 1.7
NECAB3-213ENST00000488489 ZBTB7BO15156 539 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-213ENST00000488489 NECTIN2Q92692 538 aa25.66■■□□□ 1.7
NECAB3-213ENST00000488489 KDM6AO15550 1401 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-213ENST00000488489 PKD1L3Q7Z443 1732 aa25.65■■□□□ 1.7
NECAB3-213ENST00000488489 SOS1Q07889 1333 aaPredicted RBP25.65■■□□□ 1.7
NECAB3-213ENST00000488489 IFNL2Q8IZJ0 200 aa25.64■■□□□ 1.7
NECAB3-213ENST00000488489 SIPA1L3O60292 1781 aaPredicted RBP25.64■■□□□ 1.7
NECAB3-213ENST00000488489 PTPRCP08575 1304 aa25.64■■□□□ 1.7
NECAB3-213ENST00000488489 CCDC30Q5VVM6 783 aa25.64■■□□□ 1.69
NECAB3-213ENST00000488489 CARD10Q9BWT7 1032 aa25.64■■□□□ 1.69
NECAB3-213ENST00000488489 SCN11AQ9UI33 1791 aa25.63■■□□□ 1.69
NECAB3-213ENST00000488489 EVA1CP58658 441 aa25.63■■□□□ 1.69
NECAB3-213ENST00000488489 STK31Q9BXU1 1019 aa25.62■■□□□ 1.69
NECAB3-213ENST00000488489 BCL11AQ9H165 835 aa25.62■■□□□ 1.69
NECAB3-213ENST00000488489 COL22A1Q8NFW1 1626 aaPredicted RBP25.62■■□□□ 1.69
NECAB3-213ENST00000488489 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
NECAB3-213ENST00000488489 BTG4Q9NY30 223 aa25.61■■□□□ 1.69
NECAB3-213ENST00000488489 INTS3Q68E01 1043 aaKnown RBP25.6■■□□□ 1.69
NECAB3-213ENST00000488489 RWDD1Q9H446 243 aaPredicted RBP25.6■■□□□ 1.69
NECAB3-213ENST00000488489 PIP4K2BP78356 416 aa25.6■■□□□ 1.69
NECAB3-213ENST00000488489 HDGFL1Q5TGJ6 251 aa25.6■■□□□ 1.69
NECAB3-213ENST00000488489 SLC52A2Q9HAB3 445 aa25.6■■□□□ 1.69
NECAB3-213ENST00000488489 NOP58Q9Y2X3 529 aaKnown RBP25.6■■□□□ 1.69
NECAB3-213ENST00000488489 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
NECAB3-213ENST00000488489 PHLPP1O60346 1717 aa25.58■■□□□ 1.69
NECAB3-213ENST00000488489 TOM1O60784 492 aa25.58■■□□□ 1.69
NECAB3-213ENST00000488489 NFATC2IPQ8NCF5 419 aa25.58■■□□□ 1.69
NECAB3-213ENST00000488489 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
NECAB3-213ENST00000488489 PARP4Q9UKK3 1724 aaKnown RBP25.58■■□□□ 1.69
NECAB3-213ENST00000488489 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
NECAB3-213ENST00000488489 HOXB7P09629 217 aa25.57■■□□□ 1.68
NECAB3-213ENST00000488489 HEG1Q9ULI3 1381 aa25.57■■□□□ 1.68
NECAB3-213ENST00000488489 IL2RBP14784 551 aa25.57■■□□□ 1.68
NECAB3-213ENST00000488489 EIF2S2P20042 333 aaKnown RBP25.57■■□□□ 1.68
NECAB3-213ENST00000488489 FLIIQ13045 1269 aa25.57■■□□□ 1.68
NECAB3-213ENST00000488489 HDAC1Q13547 482 aaPredicted RBP25.57■■□□□ 1.68
NECAB3-213ENST00000488489 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
NECAB3-213ENST00000488489 F6X3S4 739 aa25.56■■□□□ 1.68
NECAB3-213ENST00000488489 C1orf115Q9H7X2 142 aa25.55■■□□□ 1.68
NECAB3-213ENST00000488489 USP35Q9P2H5 1018 aa25.55■■□□□ 1.68
NECAB3-213ENST00000488489 SLC39A6Q13433 755 aa25.55■■□□□ 1.68
NECAB3-213ENST00000488489 COL14A1Q05707 1796 aaKnown RBP25.54■■□□□ 1.68
NECAB3-213ENST00000488489 GIGYF1O75420 1035 aaPredicted RBP25.54■■□□□ 1.68
NECAB3-213ENST00000488489 CHMP4BQ9H444 224 aaKnown RBP25.54■■□□□ 1.68
NECAB3-213ENST00000488489 RGS3P49796 1198 aa25.54■■□□□ 1.68
NECAB3-213ENST00000488489 PRAMEF22A3QJZ6 481 aa25.53■■□□□ 1.68
NECAB3-213ENST00000488489 HSP90AB1P08238 724 aaKnown RBP25.53■■□□□ 1.68
NECAB3-213ENST00000488489 ZNF790Q6PG37 636 aa25.53■■□□□ 1.68
NECAB3-213ENST00000488489 PCDH11XQ9BZA7 1347 aa25.53■■□□□ 1.68
NECAB3-213ENST00000488489 PCDH11YQ9BZA8 1340 aa25.53■■□□□ 1.68
NECAB3-213ENST00000488489 PHAXQ9H814 394 aaKnown RBP25.52■■□□□ 1.68
NECAB3-213ENST00000488489 MRC1P22897 1456 aa25.52■■□□□ 1.68
NECAB3-213ENST00000488489 FKBP5Q13451 457 aaPredicted RBP25.52■■□□□ 1.68
NECAB3-213ENST00000488489 CHPF2Q9P2E5 772 aa25.52■■□□□ 1.68
NECAB3-213ENST00000488489 ANP32AP39687 249 aaKnown RBP25.51■■□□□ 1.67
NECAB3-213ENST00000488489 SLC4A10Q6U841 1118 aa25.51■■□□□ 1.67
NECAB3-213ENST00000488489 SHANK3Q9BYB0 1731 aa25.5■■□□□ 1.67
NECAB3-213ENST00000488489 UBAP1LF5GYI3 381 aa25.49■■□□□ 1.67
NECAB3-213ENST00000488489 PDZRN3Q9UPQ7 1066 aa25.49■■□□□ 1.67
NECAB3-213ENST00000488489 ADAMTS2O95450 1211 aa25.49■■□□□ 1.67
NECAB3-213ENST00000488489 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
NECAB3-213ENST00000488489 DDX54Q8TDD1 881 aaKnown RBP25.48■■□□□ 1.67
NECAB3-213ENST00000488489 ANXA1P04083 346 aa25.48■■□□□ 1.67
NECAB3-213ENST00000488489 CABP4P57796 275 aa25.47■■□□□ 1.67
NECAB3-213ENST00000488489 NKX1-1Q15270 411 aaPredicted RBP25.47■■□□□ 1.67
NECAB3-213ENST00000488489 SMC5Q8IY18 1101 aa25.47■■□□□ 1.67
NECAB3-213ENST00000488489 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
NECAB3-213ENST00000488489 MEIS3Q99687 375 aa25.47■■□□□ 1.67
NECAB3-213ENST00000488489 PDE4AP27815 886 aa25.46■■□□□ 1.67
NECAB3-213ENST00000488489 CCT4P50991 539 aaKnown RBP25.46■■□□□ 1.67
NECAB3-213ENST00000488489 ZNF496Q96IT1 587 aaPredicted RBP25.46■■□□□ 1.67
NECAB3-213ENST00000488489 CHMP4AQ9BY43 222 aa25.46■■□□□ 1.67
NECAB3-213ENST00000488489 PROSER3Q2NL68 480 aa25.44■■□□□ 1.66
NECAB3-213ENST00000488489 DBF4Q9UBU7 674 aaPredicted RBP25.44■■□□□ 1.66
NECAB3-213ENST00000488489 BACH2Q9BYV9 841 aa25.43■■□□□ 1.66
NECAB3-213ENST00000488489 NUTM2BA6NNL0 878 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-213ENST00000488489 NUTM2EB1AL46 878 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-213ENST00000488489 NUTM2AQ8IVF1 878 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-213ENST00000488489 DISP2A7MBM2 1401 aa25.42■■□□□ 1.66
NECAB3-213ENST00000488489 C5P01031 1676 aa25.42■■□□□ 1.66
NECAB3-213ENST00000488489 PLCH1Q4KWH8 1693 aa25.42■■□□□ 1.66
NECAB3-213ENST00000488489 ERVV-2B6SEH9 535 aa25.42■■□□□ 1.66
NECAB3-213ENST00000488489 TTC5Q8N0Z6 440 aa25.41■■□□□ 1.66
NECAB3-213ENST00000488489 ATP10DQ9P241 1426 aa25.41■■□□□ 1.66
NECAB3-213ENST00000488489 PDIA6Q15084 440 aa25.39■■□□□ 1.66
NECAB3-213ENST00000488489 PI4KAP2A4QPH2 592 aa25.39■■□□□ 1.65
NECAB3-213ENST00000488489 PI4KAP1Q8N8J0 262 aa25.39■■□□□ 1.65
NECAB3-213ENST00000488489 PXDNLA1KZ92 1463 aa25.38■■□□□ 1.65
NECAB3-213ENST00000488489 CEP85Q6P2H3 762 aa25.37■■□□□ 1.65
NECAB3-213ENST00000488489 FMNL2Q96PY5 1086 aa25.37■■□□□ 1.65
NECAB3-213ENST00000488489 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
NECAB3-213ENST00000488489 ANKRD44Q8N8A2 993 aa25.37■■□□□ 1.65
NECAB3-213ENST00000488489 USP16Q9Y5T5 823 aa25.37■■□□□ 1.65
NECAB3-213ENST00000488489 ADCY9O60503 1353 aa25.36■■□□□ 1.65
NECAB3-213ENST00000488489 SNRPA1P09661 255 aaKnown RBP25.36■■□□□ 1.65
NECAB3-213ENST00000488489 DDX21Q9NR30 783 aaKnown RBP eCLIP25.36■■□□□ 1.65
NECAB3-213ENST00000488489 NRAPQ86VF7 1730 aa25.36■■□□□ 1.65
NECAB3-213ENST00000488489 TOGARAM1Q9Y4F4 1720 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms