RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TMEM94Q12767 1356 aa8.88□□□□□ -0.99
CDHR3-213ENST00000488386 CFAP99D6REC4 459 aa8.88□□□□□ -0.99
CDHR3-213ENST00000488386 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
CDHR3-213ENST00000488386 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
CDHR3-213ENST00000488386 PLEKHG1Q9ULL1 1385 aa8.87□□□□□ -0.99
CDHR3-213ENST00000488386 KCNA6P17658 529 aa8.87□□□□□ -0.99
CDHR3-213ENST00000488386 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
CDHR3-213ENST00000488386 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
CDHR3-213ENST00000488386 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
CDHR3-213ENST00000488386 PROSER2Q86WR7 435 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-213ENST00000488386 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-213ENST00000488386 HFM1A2PYH4 1435 aa8.87□□□□□ -0.99
CDHR3-213ENST00000488386 ADAMTS13Q76LX8 1427 aa8.87□□□□□ -0.99
CDHR3-213ENST00000488386 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
CDHR3-213ENST00000488386 NWD1Q149M9 1564 aa8.86□□□□□ -0.99
CDHR3-213ENST00000488386 A0A0G2JS52 829 aa8.86□□□□□ -0.99
CDHR3-213ENST00000488386 PPP1R18Q6NYC8 613 aa8.86□□□□□ -0.99
CDHR3-213ENST00000488386 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
CDHR3-213ENST00000488386 SLC6A16Q9GZN6 736 aa8.86□□□□□ -0.99
CDHR3-213ENST00000488386 NRXN3Q9Y4C0 1643 aa8.85□□□□□ -0.99
CDHR3-213ENST00000488386 PPEF1O14829 653 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-213ENST00000488386 TRPM2O94759 1503 aa8.85□□□□□ -0.99
CDHR3-213ENST00000488386 KIF1BO60333 1816 aa8.84□□□□□ -0.99
CDHR3-213ENST00000488386 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-213ENST00000488386 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-213ENST00000488386 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
CDHR3-213ENST00000488386 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-213ENST00000488386 PTPRUQ92729 1446 aa8.84□□□□□ -0.99
CDHR3-213ENST00000488386 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
CDHR3-213ENST00000488386 RNF223E7ERA6 249 aa8.83□□□□□ -1
CDHR3-213ENST00000488386 DXOO77932 396 aaKnown RBP8.83□□□□□ -1
CDHR3-213ENST00000488386 MMP16P51512 607 aa8.83□□□□□ -1
CDHR3-213ENST00000488386 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
CDHR3-213ENST00000488386 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.83□□□□□ -1
CDHR3-213ENST00000488386 ROBO1Q9Y6N7 1651 aa8.83□□□□□ -1
CDHR3-213ENST00000488386 NEXMIFQ5QGS0 1516 aa8.83□□□□□ -1
CDHR3-213ENST00000488386 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
CDHR3-213ENST00000488386 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
CDHR3-213ENST00000488386 JUNDP17535 347 aa8.82□□□□□ -1
CDHR3-213ENST00000488386 TBX22Q9Y458 520 aa8.82□□□□□ -1
CDHR3-213ENST00000488386 RFC5P40937 340 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 C14orf37Q86TY3 774 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
CDHR3-213ENST00000488386 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 METP08581 1390 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 DIP2AQ14689 1571 aa8.81□□□□□ -1
CDHR3-213ENST00000488386 PER1O15534 1290 aaPredicted RBP8.8□□□□□ -1
CDHR3-213ENST00000488386 TSC1Q92574 1164 aa8.8□□□□□ -1
CDHR3-213ENST00000488386 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
CDHR3-213ENST00000488386 MSH6P52701 1360 aa8.8□□□□□ -1
CDHR3-213ENST00000488386 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.8□□□□□ -1
CDHR3-213ENST00000488386 SETBP1Q9Y6X0 1596 aa8.79□□□□□ -1
CDHR3-213ENST00000488386 RGL3Q3MIN7 710 aa8.79□□□□□ -1
CDHR3-213ENST00000488386 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
CDHR3-213ENST00000488386 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
CDHR3-213ENST00000488386 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
CDHR3-213ENST00000488386 PPLO60437 1756 aa8.78□□□□□ -1
CDHR3-213ENST00000488386 SETD1AO15047 1707 aaKnown RBP8.78□□□□□ -1
CDHR3-213ENST00000488386 DESI1Q6ICB0 168 aa8.78□□□□□ -1
CDHR3-213ENST00000488386 PHLPP1O60346 1717 aa8.77□□□□□ -1
CDHR3-213ENST00000488386 RAB3GAP2Q9H2M9 1393 aa8.77□□□□□ -1.01
CDHR3-213ENST00000488386 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
CDHR3-213ENST00000488386 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
CDHR3-213ENST00000488386 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
CDHR3-213ENST00000488386 SETD5Q9C0A6 1442 aa8.77□□□□□ -1.01
CDHR3-213ENST00000488386 AP1G2O75843 785 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 GGCXP38435 758 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 NALCNQ8IZF0 1738 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
CDHR3-213ENST00000488386 PIK3R4Q99570 1358 aa8.75□□□□□ -1.01
CDHR3-213ENST00000488386 CCDC144AA2RUR9 1427 aa8.75□□□□□ -1.01
CDHR3-213ENST00000488386 PTPRNQ16849 979 aa8.75□□□□□ -1.01
CDHR3-213ENST00000488386 LRRN4Q8WUT4 740 aa8.75□□□□□ -1.01
CDHR3-213ENST00000488386 IFT172Q9UG01 1749 aa8.74□□□□□ -1.01
CDHR3-213ENST00000488386 USP17L8P0C7I0 530 aa8.74□□□□□ -1.01
CDHR3-213ENST00000488386 ATF3P18847 181 aa8.74□□□□□ -1.01
CDHR3-213ENST00000488386 HELBQ8NG08 1087 aaPredicted RBP8.74□□□□□ -1.01
CDHR3-213ENST00000488386 DDX17Q92841 729 aaKnown RBP8.74□□□□□ -1.01
CDHR3-213ENST00000488386 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
CDHR3-213ENST00000488386 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
CDHR3-213ENST00000488386 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 COL16A1Q07092 1604 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-213ENST00000488386 SPATA31E1Q6ZUB1 1445 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-213ENST00000488386 CCNYL3P0C7X3 344 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-213ENST00000488386 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
CDHR3-213ENST00000488386 ASXL1Q8IXJ9 1541 aa8.72□□□□□ -1.01
CDHR3-213ENST00000488386 SOCS7O14512 581 aa8.72□□□□□ -1.01
CDHR3-213ENST00000488386 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
CDHR3-213ENST00000488386 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
CDHR3-213ENST00000488386 STK26Q9P289 416 aa8.72□□□□□ -1.01
CDHR3-213ENST00000488386 RGS17Q9UGC6 210 aaPredicted RBP8.72□□□□□ -1.01
CDHR3-213ENST00000488386 MST1RQ04912 1400 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms