RNA–Protein interactions for RNA: ENST00000488299.5

IDH3B-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

TSL 2

Gene IDH3B, Length 1,620 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-209ENST00000488299 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
IDH3B-209ENST00000488299 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
IDH3B-209ENST00000488299 CEMIPQ8WUJ3 1361 aa22.31■■□□□ 1.16
IDH3B-209ENST00000488299 TEFQ10587 303 aa22.31■■□□□ 1.16
IDH3B-209ENST00000488299 MIS18AQ9NYP9 233 aa22.31■■□□□ 1.16
IDH3B-209ENST00000488299 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
IDH3B-209ENST00000488299 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
IDH3B-209ENST00000488299 DDX54Q8TDD1 881 aaKnown RBP22.3■■□□□ 1.16
IDH3B-209ENST00000488299 CYP27B1O15528 508 aa22.29■■□□□ 1.16
IDH3B-209ENST00000488299 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
IDH3B-209ENST00000488299 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
IDH3B-209ENST00000488299 PKD1L3Q7Z443 1732 aa22.29■■□□□ 1.16
IDH3B-209ENST00000488299 BCAR3O75815 825 aa22.28■■□□□ 1.16
IDH3B-209ENST00000488299 PCDH11XQ9BZA7 1347 aa22.28■■□□□ 1.16
IDH3B-209ENST00000488299 PCDH11YQ9BZA8 1340 aa22.28■■□□□ 1.16
IDH3B-209ENST00000488299 ZNF428Q96B54 188 aa22.27■■□□□ 1.16
IDH3B-209ENST00000488299 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
IDH3B-209ENST00000488299 ELL2O00472 640 aaPredicted RBP22.26■■□□□ 1.15
IDH3B-209ENST00000488299 VAMP4O75379 141 aa22.26■■□□□ 1.15
IDH3B-209ENST00000488299 TWISTNBQ3B726 338 aaPredicted RBP22.26■■□□□ 1.15
IDH3B-209ENST00000488299 FAM196AQ6ZSG2 479 aa22.26■■□□□ 1.15
IDH3B-209ENST00000488299 C8orf58Q8NAV2 365 aa22.26■■□□□ 1.15
IDH3B-209ENST00000488299 PLIN1O60240 522 aa22.25■■□□□ 1.15
IDH3B-209ENST00000488299 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
IDH3B-209ENST00000488299 BTBD11A6QL63 1104 aa22.24■■□□□ 1.15
IDH3B-209ENST00000488299 SOCS7O14512 581 aa22.24■■□□□ 1.15
IDH3B-209ENST00000488299 UPF1Q92900 1129 aaKnown RBP eCLIP22.24■■□□□ 1.154e-7■□□□□ 8.1
IDH3B-209ENST00000488299 ALDH1L2Q3SY69 923 aa22.22■■□□□ 1.15
IDH3B-209ENST00000488299 ERICH6BQ5W0A0 696 aa22.22■■□□□ 1.15
IDH3B-209ENST00000488299 SLC52A2Q9HAB3 445 aa22.22■■□□□ 1.15
IDH3B-209ENST00000488299 NKX1-1Q15270 411 aaPredicted RBP22.21■■□□□ 1.15
IDH3B-209ENST00000488299 SSH1Q8WYL5 1049 aa22.21■■□□□ 1.15
IDH3B-209ENST00000488299 BCL2L13Q9BXK5 485 aa22.21■■□□□ 1.15
IDH3B-209ENST00000488299 SMC4Q9NTJ3 1288 aa22.21■■□□□ 1.15
IDH3B-209ENST00000488299 BCL9O00512 1426 aa22.21■■□□□ 1.15
IDH3B-209ENST00000488299 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
IDH3B-209ENST00000488299 CANXP27824 592 aaKnown RBP22.2■■□□□ 1.15
IDH3B-209ENST00000488299 TRIM37O94972 964 aa22.2■■□□□ 1.14
IDH3B-209ENST00000488299 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
IDH3B-209ENST00000488299 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
IDH3B-209ENST00000488299 CABP4P57796 275 aa22.19■■□□□ 1.14
IDH3B-209ENST00000488299 NFATC2IPQ8NCF5 419 aa22.19■■□□□ 1.14
IDH3B-209ENST00000488299 FRAT1Q92837 279 aaPredicted RBP22.19■■□□□ 1.14
IDH3B-209ENST00000488299 ACSBG1Q96GR2 724 aa22.19■■□□□ 1.14
IDH3B-209ENST00000488299 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
IDH3B-209ENST00000488299 ERVV-2B6SEH9 535 aa22.17■■□□□ 1.14
IDH3B-209ENST00000488299 ADAMTS7Q9UKP4 1686 aa22.17■■□□□ 1.14
IDH3B-209ENST00000488299 KCNQ2O43526 872 aa22.17■■□□□ 1.14
IDH3B-209ENST00000488299 SOS1Q07889 1333 aaPredicted RBP22.16■■□□□ 1.14
IDH3B-209ENST00000488299 DOT1LQ8TEK3 1739 aa22.16■■□□□ 1.14
IDH3B-209ENST00000488299 EIF4A1P60842 406 aaKnown RBP22.16■■□□□ 1.14
IDH3B-209ENST00000488299 TNS1Q9HBL0 1735 aaKnown RBP22.15■■□□□ 1.14
IDH3B-209ENST00000488299 KCNQ3O43525 872 aa22.15■■□□□ 1.14
IDH3B-209ENST00000488299 SCN11AQ9UI33 1791 aa22.15■■□□□ 1.14
IDH3B-209ENST00000488299 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.14
IDH3B-209ENST00000488299 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
IDH3B-209ENST00000488299 VIRMAQ69YN4 1812 aaKnown RBP22.14■■□□□ 1.13
IDH3B-209ENST00000488299 NHSQ6T4R5 1651 aa22.14■■□□□ 1.13
IDH3B-209ENST00000488299 IPO8O15397 1037 aaKnown RBP22.13■■□□□ 1.13
IDH3B-209ENST00000488299 ZKSCAN2Q63HK3 967 aa22.13■■□□□ 1.13
IDH3B-209ENST00000488299 CCDC125Q86Z20 511 aa22.13■■□□□ 1.13
IDH3B-209ENST00000488299 MRPL50Q8N5N7 158 aaKnown RBP22.13■■□□□ 1.13
IDH3B-209ENST00000488299 PDE3AQ14432 1141 aa22.13■■□□□ 1.13
IDH3B-209ENST00000488299 C20orf194Q5TEA3 1177 aa22.13■■□□□ 1.13
IDH3B-209ENST00000488299 NOB1Q9ULX3 412 aaKnown RBP22.13■■□□□ 1.13
IDH3B-209ENST00000488299 KIF16BQ96L93 1317 aa22.12■■□□□ 1.13
IDH3B-209ENST00000488299 TCERG1O14776 1098 aaKnown RBP22.12■■□□□ 1.13
IDH3B-209ENST00000488299 PRIM1P49642 420 aaKnown RBP22.12■■□□□ 1.13
IDH3B-209ENST00000488299 ZNF790Q6PG37 636 aa22.12■■□□□ 1.13
IDH3B-209ENST00000488299 CHMP4AQ9BY43 222 aa22.12■■□□□ 1.13
IDH3B-209ENST00000488299 BCL11BQ9C0K0 894 aaPredicted RBP22.12■■□□□ 1.13
IDH3B-209ENST00000488299 MS4A1P11836 297 aa22.11■■□□□ 1.13
IDH3B-209ENST00000488299 SLC39A6Q13433 755 aa22.11■■□□□ 1.13
IDH3B-209ENST00000488299 SF3B2Q13435 895 aaKnown RBP22.11■■□□□ 1.13
IDH3B-209ENST00000488299 SYTL4Q96C24 671 aaPredicted RBP22.11■■□□□ 1.13
IDH3B-209ENST00000488299 HOXB7P09629 217 aa22.1■■□□□ 1.13
IDH3B-209ENST00000488299 CCDC30Q5VVM6 783 aa22.1■■□□□ 1.13
IDH3B-209ENST00000488299 TTC5Q8N0Z6 440 aa22.1■■□□□ 1.13
IDH3B-209ENST00000488299 MRC1P22897 1456 aa22.1■■□□□ 1.13
IDH3B-209ENST00000488299 APBA3O96018 575 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 DEFB132Q7Z7B7 95 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 EXOC6Q8TAG9 804 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
IDH3B-209ENST00000488299 KAT6BQ8WYB5 2073 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 KDM3BQ7LBC6 1761 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 CRBNQ96SW2 442 aa22.09■■□□□ 1.13
IDH3B-209ENST00000488299 ATF7IPQ6VMQ6 1270 aa22.08■■□□□ 1.13
IDH3B-209ENST00000488299 STK31Q9BXU1 1019 aa22.08■■□□□ 1.13
IDH3B-209ENST00000488299 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.13
IDH3B-209ENST00000488299 TMOD3Q9NYL9 352 aa22.08■■□□□ 1.13
IDH3B-209ENST00000488299 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
IDH3B-209ENST00000488299 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
IDH3B-209ENST00000488299 BTAF1O14981 1849 aa22.07■■□□□ 1.12
IDH3B-209ENST00000488299 ITGB4P16144 1822 aa22.07■■□□□ 1.12
IDH3B-209ENST00000488299 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
IDH3B-209ENST00000488299 HDGFL1Q5TGJ6 251 aa22.06■■□□□ 1.12
IDH3B-209ENST00000488299 FTSJ3Q8IY81 847 aaKnown RBP22.06■■□□□ 1.12
IDH3B-209ENST00000488299 EIF2S2P20042 333 aaKnown RBP22.06■■□□□ 1.12
IDH3B-209ENST00000488299 BAG6P46379 1132 aa22.06■■□□□ 1.12
IDH3B-209ENST00000488299 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms