RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 CCDC102BQ68D86 513 aa4.98□□□□□ -1.61
EPB41-211ENST00000488277 LARP1Q6PKG0 1096 aaKnown RBP4.98□□□□□ -1.61
EPB41-211ENST00000488277 LARGE2Q8N3Y3 721 aa4.98□□□□□ -1.61
EPB41-211ENST00000488277 ZSCAN10Q96SZ4 725 aaPredicted RBP4.98□□□□□ -1.61
EPB41-211ENST00000488277 GRIP2Q9C0E4 1043 aa4.98□□□□□ -1.61
EPB41-211ENST00000488277 ZNF358Q9NW07 568 aa4.98□□□□□ -1.61
EPB41-211ENST00000488277 RBM19Q9Y4C8 960 aaKnown RBP4.98□□□□□ -1.61
EPB41-211ENST00000488277 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
EPB41-211ENST00000488277 USP17L15C9J2P7 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L10C9JJH3 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L13C9JLJ4 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L12C9JPN9 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L11C9JVI0 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L21D6R901 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L18D6R9N7 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L22D6RA61 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L17D6RBQ6 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L19D6RCP7 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L20D6RJB6 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 BACH1O14867 736 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 RHOQP17081 205 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 SMTNP53814 917 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 PTSQ03393 145 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 USP17L24Q0WX57 530 aa4.97□□□□□ -1.61
EPB41-211ENST00000488277 CRTC2Q53ET0 693 aaPredicted RBP4.97□□□□□ -1.61
EPB41-211ENST00000488277 TMEM214Q6NUQ4 689 aaKnown RBP4.97□□□□□ -1.61
EPB41-211ENST00000488277 FHDC1Q9C0D6 1143 aaPredicted RBP4.97□□□□□ -1.61
EPB41-211ENST00000488277 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.96□□□□□ -1.62
EPB41-211ENST00000488277 A6NJY4 79 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 FAM196BA6NMK8 535 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 SFI1A8K8P3 1242 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 SPATA31C2B4DYI2 1134 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 POU4F2Q12837 409 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 PTK7Q13308 1070 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 GNASQ5JWF2 1037 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 TAS1R3Q7RTX0 852 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 SIX5Q8N196 739 aa4.96□□□□□ -1.62
EPB41-211ENST00000488277 ZNF775Q96BV0 537 aaPredicted RBP4.96□□□□□ -1.62
EPB41-211ENST00000488277 NXF1Q9UBU9 619 aaKnown RBP4.96□□□□□ -1.62
EPB41-211ENST00000488277 PHKA2P46019 1235 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 VEGFBP49765 207 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 DPYDQ12882 1025 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 NBPF10Q6P3W6 841 aaKnown RBP4.95□□□□□ -1.62
EPB41-211ENST00000488277 PPARGC1BQ86YN6 1023 aaKnown RBP4.95□□□□□ -1.62
EPB41-211ENST00000488277 NBPF15Q8N660 670 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 CCDC155Q8N6L0 562 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 RHBDD1Q8TEB9 315 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 SLC4A9Q96Q91 983 aa4.95□□□□□ -1.62
EPB41-211ENST00000488277 SENP3-EIF4A1A0A087X0R7 540 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 SLC35F4A4IF30 521 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 TERTO14746 1132 aaKnown RBP4.94□□□□□ -1.62
EPB41-211ENST00000488277 PPFIA3O75145 1194 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 DKK1O94907 266 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 SEC13P55735 322 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 MTFR1Q15390 333 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 C4orf17Q53FE4 359 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 ANKMY2Q8IV38 441 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 TNS4Q8IZW8 715 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 TSEN2Q8NCE0 465 aaKnown RBP4.94□□□□□ -1.62
EPB41-211ENST00000488277 PBXIP1Q96AQ6 731 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 ARID3AQ99856 593 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 TIMMDC1Q9NPL8 285 aa4.94□□□□□ -1.62
EPB41-211ENST00000488277 M0R2N6 131 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 CDK2AP1O14519 115 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 PLA2G4AP47712 749 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 EPHA4P54764 986 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 SRPK2P78362 688 aaKnown RBP4.93□□□□□ -1.62
EPB41-211ENST00000488277 WDR44Q5JSH3 913 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 TBCELQ5QJ74 424 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 NPAS3Q8IXF0 933 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 FAM200AQ8TCP9 573 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 SLC16A10Q8TF71 515 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 GAS2L1Q99501 681 aaPredicted RBP4.93□□□□□ -1.62
EPB41-211ENST00000488277 HINFPQ9BQA5 517 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 CABP1Q9NZU7 370 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 SCHIP1Q9P0W5 487 aaPredicted RBP4.93□□□□□ -1.62
EPB41-211ENST00000488277 NOVA2Q9UNW9 492 aaKnown RBP4.93□□□□□ -1.62
EPB41-211ENST00000488277 USP3Q9Y6I4 520 aa4.93□□□□□ -1.62
EPB41-211ENST00000488277 H3BM21 787 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 ITGA6P23229 1130 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 FOXK2Q01167 660 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 NFX1Q12986 1120 aaKnown RBP4.92□□□□□ -1.62
EPB41-211ENST00000488277 SLC9A9Q8IVB4 645 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 ARXQ96QS3 562 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 NIFKQ9BYG3 293 aaKnown RBP4.92□□□□□ -1.62
EPB41-211ENST00000488277 IQSEC3Q9UPP2 1182 aaPredicted RBP4.92□□□□□ -1.62
EPB41-211ENST00000488277 DYRK1BQ9Y463 629 aa4.92□□□□□ -1.62
EPB41-211ENST00000488277 A0A1B0GTH6 734 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 CDC14CA4D256 554 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 LGR5O75473 907 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 WFS1O76024 890 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 ATG7O95352 703 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 ELOAQ14241 798 aaKnown RBP4.91□□□□□ -1.62
EPB41-211ENST00000488277 RIPOR1Q6ZS17 1223 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 TSPAN10Q9H1Z9 355 aaPredicted RBP4.91□□□□□ -1.62
EPB41-211ENST00000488277 GPAMQ9HCL2 828 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 ZMIZ1Q9ULJ6 1067 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 PARP3Q9Y6F1 533 aa4.91□□□□□ -1.62
EPB41-211ENST00000488277 PPP1R12BO60237 982 aaPredicted RBP4.9□□□□□ -1.63
EPB41-211ENST00000488277 PPP1R15AO75807 674 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms