RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
ITSN1-230ENST00000488166 ITPK1Q13572 414 aa23.29■■□□□ 1.32
ITSN1-230ENST00000488166 ATG3Q9NT62 314 aa23.29■■□□□ 1.32
ITSN1-230ENST00000488166 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
ITSN1-230ENST00000488166 MORC1Q86VD1 984 aa23.28■■□□□ 1.32
ITSN1-230ENST00000488166 HSP90AB1P08238 724 aaKnown RBP23.27■■□□□ 1.32
ITSN1-230ENST00000488166 RBM42Q9BTD8 480 aaKnown RBP23.27■■□□□ 1.32
ITSN1-230ENST00000488166 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.31
ITSN1-230ENST00000488166 WWC3Q9ULE0 1092 aa23.26■■□□□ 1.31
ITSN1-230ENST00000488166 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
ITSN1-230ENST00000488166 ZNF530Q6P9A1 599 aaPredicted RBP23.25■■□□□ 1.31
ITSN1-230ENST00000488166 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
ITSN1-230ENST00000488166 ZNF831Q5JPB2 1677 aa23.25■■□□□ 1.31
ITSN1-230ENST00000488166 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
ITSN1-230ENST00000488166 CABP4P57796 275 aa23.23■■□□□ 1.31
ITSN1-230ENST00000488166 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
ITSN1-230ENST00000488166 RTCBQ9Y3I0 505 aaKnown RBP23.23■■□□□ 1.31
ITSN1-230ENST00000488166 KNSTRNQ9Y448 316 aa23.23■■□□□ 1.31
ITSN1-230ENST00000488166 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
ITSN1-230ENST00000488166 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
ITSN1-230ENST00000488166 KDRP35968 1356 aa23.21■■□□□ 1.31
ITSN1-230ENST00000488166 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
ITSN1-230ENST00000488166 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
ITSN1-230ENST00000488166 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
ITSN1-230ENST00000488166 MTHFSP49914 203 aa23.2■■□□□ 1.3
ITSN1-230ENST00000488166 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
ITSN1-230ENST00000488166 KDM6AO15550 1401 aaPredicted RBP23.19■■□□□ 1.3
ITSN1-230ENST00000488166 MMP10P09238 476 aa23.19■■□□□ 1.3
ITSN1-230ENST00000488166 SULT6B1Q6IMI4 303 aa23.19■■□□□ 1.3
ITSN1-230ENST00000488166 KIF13BQ9NQT8 1826 aa23.19■■□□□ 1.3
ITSN1-230ENST00000488166 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
ITSN1-230ENST00000488166 MYH14Q7Z406 1995 aaKnown RBP23.18■■□□□ 1.3
ITSN1-230ENST00000488166 SLC4A9Q96Q91 983 aa23.18■■□□□ 1.3
ITSN1-230ENST00000488166 C4AP0C0L4 1744 aa23.18■■□□□ 1.3
ITSN1-230ENST00000488166 CICQ96RK0 1608 aaPredicted RBP23.17■■□□□ 1.3
ITSN1-230ENST00000488166 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
ITSN1-230ENST00000488166 ZNF526Q8TF50 670 aaPredicted RBP23.16■■□□□ 1.3
ITSN1-230ENST00000488166 GPBP1L1Q9HC44 474 aaPredicted RBP23.16■■□□□ 1.3
ITSN1-230ENST00000488166 RFC4P35249 363 aa23.15■■□□□ 1.3
ITSN1-230ENST00000488166 RC3H1Q5TC82 1133 aaKnown RBP23.15■■□□□ 1.3
ITSN1-230ENST00000488166 NLGN1Q8N2Q7 840 aa23.15■■□□□ 1.3
ITSN1-230ENST00000488166 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
ITSN1-230ENST00000488166 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
ITSN1-230ENST00000488166 ADRA2BP18089 450 aa23.14■■□□□ 1.29
ITSN1-230ENST00000488166 NFATC2IPQ8NCF5 419 aa23.14■■□□□ 1.29
ITSN1-230ENST00000488166 RPS6KA4O75676 772 aa23.13■■□□□ 1.29
ITSN1-230ENST00000488166 KIAA1551Q9HCM1 1747 aa23.13■■□□□ 1.29
ITSN1-230ENST00000488166 IL13P35225 146 aa23.12■■□□□ 1.29
ITSN1-230ENST00000488166 TJP1Q07157 1748 aa23.12■■□□□ 1.29
ITSN1-230ENST00000488166 GYS1P13807 737 aa23.1■■□□□ 1.29
ITSN1-230ENST00000488166 CCDC87Q9NVE4 849 aa23.1■■□□□ 1.29
ITSN1-230ENST00000488166 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
ITSN1-230ENST00000488166 ADCY9O60503 1353 aa23.1■■□□□ 1.29
ITSN1-230ENST00000488166 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
ITSN1-230ENST00000488166 CRKLP46109 303 aaKnown RBP23.09■■□□□ 1.29
ITSN1-230ENST00000488166 TGFB2P61812 414 aa23.09■■□□□ 1.29
ITSN1-230ENST00000488166 BCS1LQ9Y276 419 aa23.09■■□□□ 1.29
ITSN1-230ENST00000488166 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.29
ITSN1-230ENST00000488166 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
ITSN1-230ENST00000488166 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
ITSN1-230ENST00000488166 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
ITSN1-230ENST00000488166 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
ITSN1-230ENST00000488166 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
ITSN1-230ENST00000488166 HMOX1P09601 288 aa23.06■■□□□ 1.28
ITSN1-230ENST00000488166 CC2D1BQ5T0F9 858 aaKnown RBP23.04■■□□□ 1.28
ITSN1-230ENST00000488166 SRP68Q9UHB9 627 aaKnown RBP23.04■■□□□ 1.28
ITSN1-230ENST00000488166 DPEP1P16444 411 aa23.03■■□□□ 1.28
ITSN1-230ENST00000488166 CNGB1Q14028 1251 aaPredicted RBP23.03■■□□□ 1.28
ITSN1-230ENST00000488166 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
ITSN1-230ENST00000488166 LGR6Q9HBX8 967 aa23.03■■□□□ 1.28
ITSN1-230ENST00000488166 ARFGEF1Q9Y6D6 1849 aa23.03■■□□□ 1.28
ITSN1-230ENST00000488166 FCHSD2O94868 740 aa23.02■■□□□ 1.28
ITSN1-230ENST00000488166 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
ITSN1-230ENST00000488166 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
ITSN1-230ENST00000488166 USP42Q9H9J4 1324 aaKnown RBP23.01■■□□□ 1.27
ITSN1-230ENST00000488166 RNMTO43148 476 aaKnown RBP23■■□□□ 1.27
ITSN1-230ENST00000488166 FKBP8Q14318 412 aa23■■□□□ 1.27
ITSN1-230ENST00000488166 DNAJC10Q8IXB1 793 aa23■■□□□ 1.27
ITSN1-230ENST00000488166 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
ITSN1-230ENST00000488166 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
ITSN1-230ENST00000488166 ADAMTS7Q9UKP4 1686 aa22.99■■□□□ 1.27
ITSN1-230ENST00000488166 MRC1P22897 1456 aa22.98■■□□□ 1.27
ITSN1-230ENST00000488166 ZPR1O75312 459 aa22.98■■□□□ 1.27
ITSN1-230ENST00000488166 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
ITSN1-230ENST00000488166 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
ITSN1-230ENST00000488166 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
ITSN1-230ENST00000488166 DDR1Q08345 913 aa22.96■■□□□ 1.27
ITSN1-230ENST00000488166 PIM2Q9P1W9 311 aa22.96■■□□□ 1.27
ITSN1-230ENST00000488166 CEP350Q5VT06 3117 aa22.95■■□□□ 1.26
ITSN1-230ENST00000488166 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
ITSN1-230ENST00000488166 UBR2Q8IWV8 1755 aa22.94■■□□□ 1.26
ITSN1-230ENST00000488166 KCPQ6ZWJ8 1503 aa22.94■■□□□ 1.26
ITSN1-230ENST00000488166 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
ITSN1-230ENST00000488166 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
ITSN1-230ENST00000488166 HSPA6P17066 643 aa22.94■■□□□ 1.26
ITSN1-230ENST00000488166 KCNA3P22001 575 aa22.94■■□□□ 1.26
ITSN1-230ENST00000488166 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
ITSN1-230ENST00000488166 KIF3CO14782 793 aa22.93■■□□□ 1.26
ITSN1-230ENST00000488166 POLRMTO00411 1230 aaKnown RBP22.92■■□□□ 1.26
ITSN1-230ENST00000488166 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms