RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
COL16A1-214ENST00000488128 NOLC1Q14978 699 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL16A1-214ENST00000488128 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
COL16A1-214ENST00000488128 BRD1O95696 1058 aa17.22■□□□□ 0.35
COL16A1-214ENST00000488128 MCM10Q7L590 875 aa17.22■□□□□ 0.35
COL16A1-214ENST00000488128 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-214ENST00000488128 ADCY5O95622 1261 aa17.22■□□□□ 0.35
COL16A1-214ENST00000488128 IL13P35225 146 aa17.22■□□□□ 0.35
COL16A1-214ENST00000488128 SMAP1Q8IYB5 467 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-214ENST00000488128 MSH6P52701 1360 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 COG3Q96JB2 828 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 KNDC1Q76NI1 1749 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL16A1-214ENST00000488128 MYRIPQ8NFW9 859 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
COL16A1-214ENST00000488128 SOX12O15370 315 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 PDE1AP54750 535 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 SPC24Q8NBT2 197 aa17.2■□□□□ 0.34
COL16A1-214ENST00000488128 AGLP35573 1532 aa17.19■□□□□ 0.34
COL16A1-214ENST00000488128 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
COL16A1-214ENST00000488128 ATP7BP35670 1465 aa17.19■□□□□ 0.34
COL16A1-214ENST00000488128 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-214ENST00000488128 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-214ENST00000488128 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
COL16A1-214ENST00000488128 TCHHQ07283 1943 aa17.19■□□□□ 0.34
COL16A1-214ENST00000488128 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
COL16A1-214ENST00000488128 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
COL16A1-214ENST00000488128 ATP10DQ9P241 1426 aa17.18■□□□□ 0.34
COL16A1-214ENST00000488128 PRR36Q9H6K5 1346 aa17.18■□□□□ 0.34
COL16A1-214ENST00000488128 RPAP2Q8IXW5 612 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-214ENST00000488128 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
COL16A1-214ENST00000488128 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
COL16A1-214ENST00000488128 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 IL25Q9H293 177 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
COL16A1-214ENST00000488128 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 FIBPO43427 364 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 G2E3Q7L622 706 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
COL16A1-214ENST00000488128 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
COL16A1-214ENST00000488128 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-214ENST00000488128 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
COL16A1-214ENST00000488128 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
COL16A1-214ENST00000488128 ESYT1Q9BSJ8 1104 aa17.16■□□□□ 0.34
COL16A1-214ENST00000488128 CPS1P31327 1500 aa17.16■□□□□ 0.34
COL16A1-214ENST00000488128 KIF20BQ96Q89 1820 aa17.16■□□□□ 0.34
COL16A1-214ENST00000488128 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
COL16A1-214ENST00000488128 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
COL16A1-214ENST00000488128 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
COL16A1-214ENST00000488128 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.34
COL16A1-214ENST00000488128 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
COL16A1-214ENST00000488128 CPA1P15085 419 aa17.14■□□□□ 0.33
COL16A1-214ENST00000488128 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
COL16A1-214ENST00000488128 TNRQ92752 1358 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL16A1-214ENST00000488128 DMTNQ08495 405 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 IL1RAPL2Q9NP60 686 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 AP5Z1O43299 807 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 LTKP29376 864 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 SULT6B1Q6IMI4 303 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 NRXN3Q9Y4C0 1643 aa17.13■□□□□ 0.33
COL16A1-214ENST00000488128 CUL4AQ13619 759 aa17.12■□□□□ 0.33
COL16A1-214ENST00000488128 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
COL16A1-214ENST00000488128 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
COL16A1-214ENST00000488128 PHF14O94880 888 aa17.11■□□□□ 0.33
COL16A1-214ENST00000488128 MCCP23508 829 aa17.11■□□□□ 0.33
COL16A1-214ENST00000488128 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
COL16A1-214ENST00000488128 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
COL16A1-214ENST00000488128 CHMLP26374 656 aa17.11■□□□□ 0.33
COL16A1-214ENST00000488128 ACEP12821 1306 aa17.1■□□□□ 0.33
COL16A1-214ENST00000488128 TMEM2Q9UHN6 1383 aa17.1■□□□□ 0.33
COL16A1-214ENST00000488128 RIOK3O14730 519 aaKnown RBP17.1■□□□□ 0.33
COL16A1-214ENST00000488128 MX1P20591 662 aa17.1■□□□□ 0.33
COL16A1-214ENST00000488128 HMMRO75330 724 aa17.1■□□□□ 0.33
COL16A1-214ENST00000488128 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
COL16A1-214ENST00000488128 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
COL16A1-214ENST00000488128 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
COL16A1-214ENST00000488128 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 HSP90AB2PQ58FF8 381 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 FOXO3O43524 673 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 CCDC183Q5T5S1 534 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
COL16A1-214ENST00000488128 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 RGS12O14924 1447 aa17.09■□□□□ 0.33
COL16A1-214ENST00000488128 KCNF1Q9H3M0 494 aa17.08■□□□□ 0.33
COL16A1-214ENST00000488128 TTC21BQ7Z4L5 1316 aa17.08■□□□□ 0.33
COL16A1-214ENST00000488128 CDK12Q9NYV4 1490 aaPredicted RBP17.08■□□□□ 0.33
COL16A1-214ENST00000488128 KDM4AO75164 1064 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms