RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 SCAF11Q99590 1463 aaKnown RBP9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 MED1Q15648 1581 aaPredicted RBP9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
TNFSF4-203ENST00000488053 LRRN4Q8WUT4 740 aa9.81□□□□□ -0.84
TNFSF4-203ENST00000488053 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
TNFSF4-203ENST00000488053 KANK1Q14678 1352 aa9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 MCM6Q14566 821 aa9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 CCDC24Q8N4L8 307 aa9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 ARHGAP31Q2M1Z3 1444 aa9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 SYNMO15061 1565 aa9.8□□□□□ -0.84
TNFSF4-203ENST00000488053 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 SLIT1O75093 1534 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 F12P00748 615 aaPredicted RBP9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 CTHP32929 405 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 FAM50AQ14320 339 aaKnown RBP9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 SNRKQ9NRH2 765 aa9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 XIRP1Q702N8 1843 aaKnown RBP9.79□□□□□ -0.84
TNFSF4-203ENST00000488053 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
TNFSF4-203ENST00000488053 EID1Q9Y6B2 187 aa9.78□□□□□ -0.84
TNFSF4-203ENST00000488053 IDI1Q13907 227 aa9.77□□□□□ -0.85
TNFSF4-203ENST00000488053 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
TNFSF4-203ENST00000488053 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.85
TNFSF4-203ENST00000488053 TMEM2Q9UHN6 1383 aa9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 ZBTB24O43167 697 aaPredicted RBP9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 PRM3Q9NNZ6 103 aa9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 MYO5BQ9ULV0 1848 aa9.76□□□□□ -0.85
TNFSF4-203ENST00000488053 ARMC2Q8NEN0 867 aa9.75□□□□□ -0.85
TNFSF4-203ENST00000488053 LMTK2Q8IWU2 1503 aa9.75□□□□□ -0.85
TNFSF4-203ENST00000488053 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
TNFSF4-203ENST00000488053 RPIAP49247 311 aa9.74□□□□□ -0.85
TNFSF4-203ENST00000488053 NR6A1Q15406 480 aa9.74□□□□□ -0.85
TNFSF4-203ENST00000488053 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
TNFSF4-203ENST00000488053 UNC93B1Q9H1C4 597 aa9.74□□□□□ -0.85
TNFSF4-203ENST00000488053 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 PTCRAQ6ISU1 281 aaPredicted RBP9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 GJD4Q96KN9 370 aaPredicted RBP9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 KDM5AP29375 1690 aaKnown RBP9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 NOS1P29475 1434 aa9.73□□□□□ -0.85
TNFSF4-203ENST00000488053 GCC2Q8IWJ2 1684 aa9.72□□□□□ -0.85
TNFSF4-203ENST00000488053 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
TNFSF4-203ENST00000488053 TMEM94Q12767 1356 aa9.72□□□□□ -0.85
TNFSF4-203ENST00000488053 ANKRD50Q9ULJ7 1429 aa9.72□□□□□ -0.85
TNFSF4-203ENST00000488053 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
TNFSF4-203ENST00000488053 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
TNFSF4-203ENST00000488053 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
TNFSF4-203ENST00000488053 TET3O43151 1660 aa9.71□□□□□ -0.86
TNFSF4-203ENST00000488053 RGS20O76081 388 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 CD2BP2O95400 341 aaKnown RBP9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 KCNA6P17658 529 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 ITGAEP38570 1179 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 SLC19A1P41440 591 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 TRIM32Q13049 653 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 EPS8L1Q8TE68 723 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 GPKOWQ92917 476 aaPredicted RBP eCLIP9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 FKBPLQ9UIM3 349 aa9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 V9GY48 417 aaPredicted RBP9.7□□□□□ -0.86
TNFSF4-203ENST00000488053 RAD21O60216 631 aa9.69□□□□□ -0.86
TNFSF4-203ENST00000488053 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
TNFSF4-203ENST00000488053 SLC52A1Q9NWF4 448 aa9.69□□□□□ -0.86
TNFSF4-203ENST00000488053 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
TNFSF4-203ENST00000488053 UNC13BO14795 1591 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 NWD1Q149M9 1564 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 RPRD2Q5VT52 1461 aaKnown RBP9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 RIMS2Q9UQ26 1411 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
TNFSF4-203ENST00000488053 E9PCH4 1651 aa9.67□□□□□ -0.86
TNFSF4-203ENST00000488053 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
TNFSF4-203ENST00000488053 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
TNFSF4-203ENST00000488053 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
TNFSF4-203ENST00000488053 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
TNFSF4-203ENST00000488053 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
TNFSF4-203ENST00000488053 FAM135BQ49AJ0 1406 aa9.66□□□□□ -0.86
TNFSF4-203ENST00000488053 WNT7BP56706 349 aa9.66□□□□□ -0.86
TNFSF4-203ENST00000488053 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
TNFSF4-203ENST00000488053 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
TNFSF4-203ENST00000488053 MSH6P52701 1360 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 PLEKHG1Q9ULL1 1385 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 ZNF511Q8NB15 262 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 BAP1Q92560 729 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
TNFSF4-203ENST00000488053 PHLPP1O60346 1717 aa9.65□□□□□ -0.87
TNFSF4-203ENST00000488053 IQGAP3Q86VI3 1631 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 SPRYD7Q5W111 196 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 PDXDC2PQ6P474 469 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
TNFSF4-203ENST00000488053 NUP155O75694 1391 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms