RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 TIMELESSQ9UNS1 1208 aa10.43□□□□□ -0.74
SCAP-212ENST00000487942 BCL9O00512 1426 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 KCNQ2O43526 872 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 IL2RBP14784 551 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 HOXC9P31274 260 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 RRS1Q15050 365 aaKnown RBP10.42□□□□□ -0.74
SCAP-212ENST00000487942 POTEGQ6S5H5 508 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
SCAP-212ENST00000487942 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
SCAP-212ENST00000487942 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
SCAP-212ENST00000487942 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
SCAP-212ENST00000487942 ACSBG1Q96GR2 724 aa10.41□□□□□ -0.74
SCAP-212ENST00000487942 ITGB4P16144 1822 aa10.41□□□□□ -0.74
SCAP-212ENST00000487942 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
SCAP-212ENST00000487942 MEGF6O75095 1541 aa10.4□□□□□ -0.74
SCAP-212ENST00000487942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
SCAP-212ENST00000487942 PLSCR1O15162 318 aa10.4□□□□□ -0.74
SCAP-212ENST00000487942 AMPHP49418 695 aa10.4□□□□□ -0.74
SCAP-212ENST00000487942 EFCAB3Q8N7B9 438 aa10.4□□□□□ -0.74
SCAP-212ENST00000487942 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
SCAP-212ENST00000487942 ANO8Q9HCE9 1232 aaPredicted RBP10.4□□□□□ -0.74
SCAP-212ENST00000487942 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
SCAP-212ENST00000487942 LY75O60449 1722 aa10.39□□□□□ -0.75
SCAP-212ENST00000487942 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
SCAP-212ENST00000487942 L3MBTL3Q96JM7 780 aaPredicted RBP10.39□□□□□ -0.75
SCAP-212ENST00000487942 PAPPAQ13219 1627 aa10.39□□□□□ -0.75
SCAP-212ENST00000487942 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 USHBP1Q8N6Y0 703 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 PDGFDQ9GZP0 370 aaPredicted RBP10.38□□□□□ -0.75
SCAP-212ENST00000487942 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
SCAP-212ENST00000487942 HSPA5P11021 654 aaKnown RBP10.37□□□□□ -0.75
SCAP-212ENST00000487942 TXNRD1Q16881 649 aa10.37□□□□□ -0.75
SCAP-212ENST00000487942 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
SCAP-212ENST00000487942 PKD1L3Q7Z443 1732 aa10.37□□□□□ -0.75
SCAP-212ENST00000487942 DDX54Q8TDD1 881 aaKnown RBP10.37□□□□□ -0.75
SCAP-212ENST00000487942 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
SCAP-212ENST00000487942 QSER1Q2KHR3 1735 aa10.36□□□□□ -0.75
SCAP-212ENST00000487942 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
SCAP-212ENST00000487942 EMILIN1Q9Y6C2 1016 aa10.36□□□□□ -0.75
SCAP-212ENST00000487942 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
SCAP-212ENST00000487942 INSRP06213 1382 aa10.35□□□□□ -0.75
SCAP-212ENST00000487942 FLT4P35916 1363 aa10.35□□□□□ -0.75
SCAP-212ENST00000487942 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCAP-212ENST00000487942 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
SCAP-212ENST00000487942 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
SCAP-212ENST00000487942 PPM1GO15355 546 aaPredicted RBP10.33□□□□□ -0.76
SCAP-212ENST00000487942 ZCRB1Q8TBF4 217 aaKnown RBP10.33□□□□□ -0.76
SCAP-212ENST00000487942 LRRC4BQ9NT99 713 aa10.33□□□□□ -0.76
SCAP-212ENST00000487942 NSD2O96028 1365 aa10.33□□□□□ -0.76
SCAP-212ENST00000487942 C5P01031 1676 aa10.32□□□□□ -0.76
SCAP-212ENST00000487942 TNNT2P45379 298 aaPredicted RBP10.32□□□□□ -0.76
SCAP-212ENST00000487942 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
SCAP-212ENST00000487942 KCNQ4P56696 695 aa10.32□□□□□ -0.76
SCAP-212ENST00000487942 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
SCAP-212ENST00000487942 COL24A1Q17RW2 1714 aa10.32□□□□□ -0.76
SCAP-212ENST00000487942 CGNL1Q0VF96 1302 aa10.32□□□□□ -0.76
SCAP-212ENST00000487942 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 ZBTB7AO95365 584 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 SLC15A2Q16348 729 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 ZNF827Q17R98 1081 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 SYTL4Q96C24 671 aaPredicted RBP10.31□□□□□ -0.76
SCAP-212ENST00000487942 PANK3Q9H999 370 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 SPON1Q9HCB6 807 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 STK32BQ9NY57 414 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 NCAPD2Q15021 1401 aa10.31□□□□□ -0.76
SCAP-212ENST00000487942 ST18O60284 1047 aa10.3□□□□□ -0.76
SCAP-212ENST00000487942 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
SCAP-212ENST00000487942 WASHC2AQ641Q2 1341 aa10.3□□□□□ -0.76
SCAP-212ENST00000487942 RGL2O15211 777 aa10.29□□□□□ -0.76
SCAP-212ENST00000487942 TATP17735 454 aaPredicted RBP10.29□□□□□ -0.76
SCAP-212ENST00000487942 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
SCAP-212ENST00000487942 G3V3G9 751 aa10.28□□□□□ -0.76
SCAP-212ENST00000487942 CYP27B1O15528 508 aa10.28□□□□□ -0.76
SCAP-212ENST00000487942 PTGER2P43116 358 aa10.28□□□□□ -0.76
SCAP-212ENST00000487942 EYA1Q99502 592 aa10.28□□□□□ -0.76
SCAP-212ENST00000487942 PPP1R1BQ9UD71 204 aaPredicted RBP10.28□□□□□ -0.76
SCAP-212ENST00000487942 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
SCAP-212ENST00000487942 PCDH11XQ9BZA7 1347 aa10.27□□□□□ -0.77
SCAP-212ENST00000487942 PCDH11YQ9BZA8 1340 aa10.27□□□□□ -0.77
SCAP-212ENST00000487942 CHD4Q14839 1912 aa10.27□□□□□ -0.77
SCAP-212ENST00000487942 EIF4A2Q14240 407 aaKnown RBP10.26□□□□□ -0.77
SCAP-212ENST00000487942 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
SCAP-212ENST00000487942 KIF7Q2M1P5 1343 aa10.26□□□□□ -0.77
SCAP-212ENST00000487942 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 SCN11AQ9UI33 1791 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 MPRIPQ6WCQ1 1025 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 PNPLA7Q6ZV29 1317 aa10.25□□□□□ -0.77
SCAP-212ENST00000487942 STK25O00506 426 aa10.24□□□□□ -0.77
SCAP-212ENST00000487942 SNPHO15079 494 aa10.24□□□□□ -0.77
SCAP-212ENST00000487942 TMEM121BQ9BXQ6 578 aaPredicted RBP10.24□□□□□ -0.77
SCAP-212ENST00000487942 MTFR1LQ9H019 292 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms